RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 SMAP1Q8IYB5 467 aaPredicted RBP8.12□□□□□ -1.11
NUP43-206ENST00000543637 FIBCD1Q8N539 461 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 HLA-CQ95604 372 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 IL17RAQ96F46 866 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 FTHL17Q9BXU8 183 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 FAM49AQ9H0Q0 323 aaPredicted RBP8.12□□□□□ -1.11
NUP43-206ENST00000543637 LRFN2Q9ULH4 789 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 RWDD3Q9Y3V2 267 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 TELO2Q9Y4R8 837 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 PCDHA2Q9Y5H9 948 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 PCDHA10Q9Y5I2 948 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 CDY2AQ9Y6F7 541 aa8.12□□□□□ -1.11
NUP43-206ENST00000543637 COL1A2P08123 1366 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 LCHNA4D1U4 455 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 MBLAC1A4D2B0 266 aaPredicted RBP8.11□□□□□ -1.11
NUP43-206ENST00000543637 LINC01553A4QN01 128 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 ENPP3O14638 875 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 MARCH6O60337 910 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 CENPBP07199 599 aaPredicted RBP8.11□□□□□ -1.11
NUP43-206ENST00000543637 TMOD1P28289 359 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 EVCP57679 992 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 HTRA4P83105 476 aaPredicted RBP8.11□□□□□ -1.11
NUP43-206ENST00000543637 KRT76Q01546 638 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 NFX1Q12986 1120 aaKnown RBP8.11□□□□□ -1.11
NUP43-206ENST00000543637 ANKRD1Q15327 319 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 NTRK3Q16288 839 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 TCTN1Q2MV58 587 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 PRR16Q569H4 304 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 FBXO47Q5MNV8 452 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 GALNT17Q6IS24 598 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 ZNF746Q6NUN9 644 aaPredicted RBP8.11□□□□□ -1.11
NUP43-206ENST00000543637 RUFY4Q6ZNE9 571 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 TSHZ1Q6ZSZ6 1077 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 BBXQ8WY36 941 aaPredicted RBP8.11□□□□□ -1.11
NUP43-206ENST00000543637 PCYT2Q99447 389 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 CELF4Q9BZC1 486 aaKnown RBP8.11□□□□□ -1.11
NUP43-206ENST00000543637 SLKQ9H2G2 1235 aaPredicted RBP8.11□□□□□ -1.11
NUP43-206ENST00000543637 SUGCTQ9HAC7 445 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 NCOA5Q9HCD5 579 aaKnown RBP8.11□□□□□ -1.11
NUP43-206ENST00000543637 PRDM6Q9NQX0 595 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 VPS54Q9P1Q0 977 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 CEP131Q9UPN4 1083 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 TRPV2Q9Y5S1 764 aa8.11□□□□□ -1.11
NUP43-206ENST00000543637 IGKV6D-21A0A0A0MT36 114 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 FAM86B1E9PN63 330 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 TNFRSF10AO00220 468 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 GPR182O15218 404 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 MAGEB2O15479 319 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 PPFIA3O75145 1194 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 RPS6KA5O75582 802 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 RB1P06400 928 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 FAM86B2P0C5J1 330 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 SFNP31947 248 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 MGAT3Q09327 533 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 TMEM62Q0P6H9 643 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 PAK2Q13177 524 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 ITGB3BPQ13352 177 aaPredicted RBP8.1□□□□□ -1.11
NUP43-206ENST00000543637 GPM6BQ13491 265 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 TOB2Q14106 344 aaPredicted RBP8.1□□□□□ -1.11
NUP43-206ENST00000543637 BTG3Q14201 252 aaPredicted RBP8.1□□□□□ -1.11
NUP43-206ENST00000543637 LPIN1Q14693 890 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 EPC2Q52LR7 807 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 MARCH8Q5T0T0 291 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 TMEM192Q8IY95 271 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 BLIDQ8IZY5 108 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 FAM177A1Q8N128 213 aaPredicted RBP8.1□□□□□ -1.11
NUP43-206ENST00000543637 METTL13Q8N6R0 699 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 TBCKQ8TEA7 893 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 ATP8B4Q8TF62 1192 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 TRAPPC12Q8WVT3 735 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 WASF1Q92558 559 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 FAM167AQ96KS9 214 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 UIMC1Q96RL1 719 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 TEKT3Q9BXF9 490 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 UPF3BQ9BZI7 483 aaKnown RBP8.1□□□□□ -1.11
NUP43-206ENST00000543637 GABBR1Q9UBS5 961 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 PADI3Q9ULW8 664 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 PCDHA4Q9UN74 947 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 GINS2Q9Y248 185 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 PCDHB7Q9Y5E2 793 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 NID2Q14112 1375 aa8.1□□□□□ -1.11
NUP43-206ENST00000543637 COL4A4P53420 1690 aaPredicted RBP8.09□□□□□ -1.11
NUP43-206ENST00000543637 IGLV3-22A0A075B6J6 115 aa8.09□□□□□ -1.11
NUP43-206ENST00000543637 CCDC194A0A1B0GVG4 234 aa8.09□□□□□ -1.11
NUP43-206ENST00000543637 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.09□□□□□ -1.11
NUP43-206ENST00000543637 DENND3A2RUS2 1198 aa8.09□□□□□ -1.11
NUP43-206ENST00000543637 EPOPA6NHQ4 379 aa8.09□□□□□ -1.11
NUP43-206ENST00000543637 WDR64B1ANS9 1081 aa8.09□□□□□ -1.11
NUP43-206ENST00000543637 H3BNC9 293 aa8.09□□□□□ -1.11
NUP43-206ENST00000543637 DHX15O43143 795 aaKnown RBP8.09□□□□□ -1.11
NUP43-206ENST00000543637 DKC1O60832 514 aaKnown RBP eCLIP8.09□□□□□ -1.11
NUP43-206ENST00000543637 GAS7O60861 476 aa8.09□□□□□ -1.11
NUP43-206ENST00000543637 CCNE2O96020 404 aa8.09□□□□□ -1.11
NUP43-206ENST00000543637 CD52P31358 61 aa8.09□□□□□ -1.11
NUP43-206ENST00000543637 CIITAP33076 1130 aa8.09□□□□□ -1.11
NUP43-206ENST00000543637 DNM2P50570 870 aa8.09□□□□□ -1.11
NUP43-206ENST00000543637 NONOQ15233 471 aaKnown RBP eCLIP8.09□□□□□ -1.11
NUP43-206ENST00000543637 LRCH2Q5VUJ6 765 aa8.09□□□□□ -1.11
NUP43-206ENST00000543637 MIER3Q7Z3K6 550 aa8.09□□□□□ -1.11
NUP43-206ENST00000543637 KRT25Q7Z3Z0 450 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms