RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 FUT8Q9BYC5 575 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 CHMP2AO43633 222 aa15.31■□□□□ 0.04
MSH2-206ENST00000543555 TACC1O75410 805 aa15.31■□□□□ 0.04
MSH2-206ENST00000543555 EPS15P42566 896 aa15.31■□□□□ 0.04
MSH2-206ENST00000543555 MAGEA1P43355 309 aa15.31■□□□□ 0.04
MSH2-206ENST00000543555 SLC9C1Q4G0N8 1177 aa15.31■□□□□ 0.04
MSH2-206ENST00000543555 UTP14CQ5TAP6 766 aaKnown RBP15.31■□□□□ 0.04
MSH2-206ENST00000543555 LDHDQ86WU2 507 aa15.31■□□□□ 0.04
MSH2-206ENST00000543555 MICALL2Q8IY33 904 aa15.31■□□□□ 0.04
MSH2-206ENST00000543555 PIGOQ8TEQ8 1089 aa15.31■□□□□ 0.04
MSH2-206ENST00000543555 ZBED3Q96IU2 234 aaPredicted RBP15.31■□□□□ 0.04
MSH2-206ENST00000543555 TLR2O60603 784 aa15.31■□□□□ 0.04
MSH2-206ENST00000543555 SERPING1P05155 500 aa15.31■□□□□ 0.04
MSH2-206ENST00000543555 LMNB1P20700 586 aa15.31■□□□□ 0.04
MSH2-206ENST00000543555 GFPT1Q06210 699 aaPredicted RBP15.31■□□□□ 0.04
MSH2-206ENST00000543555 TDRD12Q587J7 1177 aaKnown RBP15.31■□□□□ 0.04
MSH2-206ENST00000543555 SAMD1Q6SPF0 538 aaPredicted RBP15.31■□□□□ 0.04
MSH2-206ENST00000543555 TPH2Q8IWU9 490 aa15.31■□□□□ 0.04
MSH2-206ENST00000543555 MMS19Q96T76 1030 aa15.31■□□□□ 0.04
MSH2-206ENST00000543555 MLXIPQ9HAP2 919 aa15.31■□□□□ 0.04
MSH2-206ENST00000543555 OLFML3Q9NRN5 406 aa15.31■□□□□ 0.04
MSH2-206ENST00000543555 TYW1Q9NV66 732 aaKnown RBP15.31■□□□□ 0.04
MSH2-206ENST00000543555 ARMCX3Q9UH62 379 aaPredicted RBP15.31■□□□□ 0.04
MSH2-206ENST00000543555 CAPN6Q9Y6Q1 641 aa15.31■□□□□ 0.04
MSH2-206ENST00000543555 PJA2O43164 708 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 GAS7O60861 476 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 GCNT3O95395 438 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 TUBBP07437 444 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 ASNSP08243 561 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 GAP43P17677 238 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 APBA1Q02410 837 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 MAP3K10Q02779 954 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 CKAP4Q07065 602 aaKnown RBP15.3■□□□□ 0.04
MSH2-206ENST00000543555 BCAS3Q9H6U6 928 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 CNOT7Q9UIV1 285 aaKnown RBP15.3■□□□□ 0.04
MSH2-206ENST00000543555 FZD1Q9UP38 647 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 JRKLQ9Y4A0 524 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 ASTN1O14525 1302 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 FER1L6Q2WGJ9 1857 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 RBAK-RBAKDNI3L0D1 243 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 BEND6Q5SZJ8 279 aaPredicted RBP15.3■□□□□ 0.04
MSH2-206ENST00000543555 RPGRIP1Q96KN7 1286 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 CAPZA3Q96KX2 299 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 GANQ9H2C0 597 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 POLD4Q9HCU8 107 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 WNT10BO00744 389 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 ERLIN1O75477 346 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 VSNL1P62760 191 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 SETQ01105 290 aaPredicted RBP15.3■□□□□ 0.04
MSH2-206ENST00000543555 TXLNBQ8N3L3 684 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 WDR11Q9BZH6 1224 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 UBXN6Q9BZV1 441 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 DEFB129Q9H1M3 183 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 JADE2Q9NQC1 790 aa15.3■□□□□ 0.04
MSH2-206ENST00000543555 ATAD5Q96QE3 1844 aa15.29■□□□□ 0.04
MSH2-206ENST00000543555 MOCS3O95396 460 aa15.29■□□□□ 0.04
MSH2-206ENST00000543555 NR3C1P04150 777 aa15.29■□□□□ 0.04
MSH2-206ENST00000543555 ARP10275 920 aa15.29■□□□□ 0.04
MSH2-206ENST00000543555 MUTP22033 750 aa15.29■□□□□ 0.04
MSH2-206ENST00000543555 C1orf186Q6ZWK4 172 aa15.29■□□□□ 0.04
MSH2-206ENST00000543555 ZNF577Q9BSK1 485 aa15.29■□□□□ 0.04
MSH2-206ENST00000543555 FZD9O00144 591 aa15.29■□□□□ 0.04
MSH2-206ENST00000543555 AKAP3O75969 853 aa15.29■□□□□ 0.04
MSH2-206ENST00000543555 FAM13AO94988 1023 aa15.29■□□□□ 0.04
MSH2-206ENST00000543555 AFPP02771 609 aaKnown RBP15.29■□□□□ 0.04
MSH2-206ENST00000543555 TERF2Q15554 542 aa15.29■□□□□ 0.04
MSH2-206ENST00000543555 ZFP91Q96JP5 570 aaPredicted RBP15.29■□□□□ 0.04
MSH2-206ENST00000543555 SNX12Q9UMY4 172 aa15.29■□□□□ 0.04
MSH2-206ENST00000543555 RBBP6Q7Z6E9 1792 aaKnown RBP15.29■□□□□ 0.04
MSH2-206ENST00000543555 ZNF185O15231 689 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 SLC16A3O15427 465 aaKnown RBP15.28■□□□□ 0.04
MSH2-206ENST00000543555 XRCC5P13010 732 aaKnown RBP15.28■□□□□ 0.04
MSH2-206ENST00000543555 RPL13P26373 211 aaKnown RBP15.28■□□□□ 0.04
MSH2-206ENST00000543555 RAPGEF1Q13905 1077 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 ALS2CR12Q96Q35 445 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 ZMYND15Q9H091 742 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 UNC45AQ9H3U1 944 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 MYOZ2Q9NPC6 264 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 AIPL1Q9NZN9 384 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 SFI1A8K8P3 1242 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 MAP2K7O14733 419 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 EIF3DO15371 548 aaKnown RBP eCLIP15.28■□□□□ 0.042e-6■■■□□ 16.1
MSH2-206ENST00000543555 ICAM1P05362 532 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 INPP5BP32019 993 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 USP14P54578 494 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 KCNA1Q09470 495 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 WDR93Q6P2C0 686 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 B3GNT9Q6UX72 402 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 ZNF341Q9BYN7 854 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 GBP3Q9H0R5 595 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 METTL14Q9HCE5 456 aaKnown RBP15.28■□□□□ 0.04
MSH2-206ENST00000543555 ABCB6Q9NP58 842 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 PLCB1Q9NQ66 1216 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 CCPG1Q9ULG6 757 aa15.28■□□□□ 0.04
MSH2-206ENST00000543555 ZBTB39O15060 712 aa15.27■□□□□ 0.04
MSH2-206ENST00000543555 HSD17B4P51659 736 aa15.27■□□□□ 0.04
MSH2-206ENST00000543555 EPHA7Q15375 998 aa15.27■□□□□ 0.04
MSH2-206ENST00000543555 DPY19L2P1Q6NXN4 242 aa15.27■□□□□ 0.04
MSH2-206ENST00000543555 MYCT1Q8N699 235 aa15.27■□□□□ 0.04
MSH2-206ENST00000543555 CAGE1Q8TC20 777 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms