RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 CUL4BQ13620 913 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 UTP14CQ5TAP6 766 aaKnown RBP11.9□□□□□ -0.5
DDB1-221ENST00000543162 OTUD6AQ7L8S5 288 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 GPBP1Q86WP2 473 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 TRPV1Q8NER1 839 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 PXYLP1Q8TE99 480 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 AFG1LQ8WV93 481 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 GLG1Q92896 1179 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 CCDC43Q96MW1 224 aaKnown RBP11.9□□□□□ -0.5
DDB1-221ENST00000543162 C7orf25Q9BPX7 421 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 TRIM9Q9C026 710 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 AP5M1Q9H0R1 490 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 BMP2KQ9NSY1 1161 aaPredicted RBP11.9□□□□□ -0.5
DDB1-221ENST00000543162 ANKEF1Q9NU02 776 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 TUBE1Q9UJT0 475 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 DBR1Q9UK59 544 aaKnown RBP11.9□□□□□ -0.5
DDB1-221ENST00000543162 TRIM17Q9Y577 477 aa11.9□□□□□ -0.5
DDB1-221ENST00000543162 MAFBQ9Y5Q3 323 aaPredicted RBP11.9□□□□□ -0.5
DDB1-221ENST00000543162 MYH9P35579 1960 aaKnown RBP11.9□□□□□ -0.5
DDB1-221ENST00000543162 LOXHD1Q8IVV2 1947 aa11.9□□□□□ -0.51
DDB1-221ENST00000543162 EMSYQ7Z589 1322 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 MYMKA6NI61 221 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 BIN1O00499 593 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 ADCY6O43306 1168 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 ZNF862O60290 1169 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 LGR5O75473 907 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 RPN1P04843 607 aaKnown RBP11.89□□□□□ -0.51
DDB1-221ENST00000543162 KRT18P05783 430 aaKnown RBP11.89□□□□□ -0.51
DDB1-221ENST00000543162 PRKAR2AP13861 404 aaKnown RBP11.89□□□□□ -0.51
DDB1-221ENST00000543162 CYP11B2P19099 503 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 CNGA1P29973 690 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 ASIC1P78348 528 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 PRKCEQ02156 737 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 CACNB2Q08289 660 aaPredicted RBP11.89□□□□□ -0.51
DDB1-221ENST00000543162 TRIM32Q13049 653 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 XKR3Q5GH77 459 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 LRSAM1Q6UWE0 723 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 TRMT1LQ7Z2T5 733 aaKnown RBP11.89□□□□□ -0.51
DDB1-221ENST00000543162 TLK2Q86UE8 772 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 SLAIN1Q8ND83 568 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 SPATA20Q8TB22 786 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 AFAP1L1Q8TED9 768 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 DDX12PQ92771 950 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 CCDC47Q96A33 483 aaKnown RBP11.89□□□□□ -0.51
DDB1-221ENST00000543162 GSDMAQ96QA5 445 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 PCYT2Q99447 389 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 SMARCAD1Q9H4L7 1026 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 GNEQ9Y223 722 aaKnown RBP11.89□□□□□ -0.51
DDB1-221ENST00000543162 Q9Y3F1 56 aa11.89□□□□□ -0.51
DDB1-221ENST00000543162 SEPT4O43236 478 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 DUSP11O75319 330 aaKnown RBP11.88□□□□□ -0.51
DDB1-221ENST00000543162 PPFIA4O75335 1185 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 OATP04181 439 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 SARSP49591 514 aaKnown RBP11.88□□□□□ -0.51
DDB1-221ENST00000543162 RARRES1P49788 294 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 SLC26A2P50443 739 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 TYRO3Q06418 890 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 STX1AQ16623 288 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 DGKDQ16760 1214 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 BRDTQ58F21 947 aaPredicted RBP11.88□□□□□ -0.51
DDB1-221ENST00000543162 XKR9Q5GH70 373 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 NT5DC1Q5TFE4 455 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 CNNM4Q6P4Q7 775 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 ANO5Q75V66 913 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 DYMQ7RTS9 669 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 PLPPR4Q7Z2D5 763 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 TRIM50Q86XT4 487 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 LENG1Q96BZ8 264 aaPredicted RBP11.88□□□□□ -0.51
DDB1-221ENST00000543162 FAM167AQ96KS9 214 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 TSPY26PQ9H489 355 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 NRBP2Q9NSY0 501 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 RMND1Q9NWS8 449 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 SEPT9Q9UHD8 586 aaPredicted RBP11.88□□□□□ -0.51
DDB1-221ENST00000543162 MAN1B1Q9UKM7 699 aa11.88□□□□□ -0.51
DDB1-221ENST00000543162 NPHP3-ACAD11A0A0J9YXS1 232 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 PVALEFA0A1B0GWK0 134 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 TMEM150BA6NC51 233 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 A6NJR5 290 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 STBD1O95210 358 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 LGALS2P05162 132 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 MMP3P08254 477 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 RARBP10826 455 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 HOXD8P13378 290 aaPredicted RBP11.87□□□□□ -0.51
DDB1-221ENST00000543162 IDEP14735 1019 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 ATP4AP20648 1035 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 GRK4P32298 578 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 CPT1AP50416 773 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 NPEPPSP55786 919 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 NLRP12P59046 1061 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 ARSHQ5FYA8 562 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 MAP3K21Q5TCX8 1036 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 PLA2G4FQ68DD2 849 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 ISM2Q6H9L7 571 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 RINT1Q6NUQ1 792 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 PADI6Q6TGC4 694 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 TRIML1Q8N9V2 468 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 CEP170P1Q96L14 293 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 FUCA2Q9BTY2 467 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 RUSC1Q9BVN2 902 aa11.87□□□□□ -0.51
DDB1-221ENST00000543162 EXOC1Q9NV70 894 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms