RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 PSMD10O75832 226 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 RPL13P26373 211 aaKnown RBP7.19□□□□□ -1.26
PTPRO-208ENST00000542557 HOXD13P35453 343 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 ZNF76P36508 570 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 ASIC2Q16515 512 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 EXOC8Q8IYI6 725 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 FAM151AQ8WW52 585 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 SLC5A5Q92911 643 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 HSD17B14Q9BPX1 270 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 BHMT2Q9H2M3 363 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 ZHX3Q9H4I2 956 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.19□□□□□ -1.26
PTPRO-208ENST00000542557 GPBP1L1Q9HC44 474 aaPredicted RBP7.19□□□□□ -1.26
PTPRO-208ENST00000542557 SALL4Q9UJQ4 1053 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 BZW2Q9Y6E2 419 aaKnown RBP7.19□□□□□ -1.26
PTPRO-208ENST00000542557 FRMPD4Q14CM0 1322 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 GTPBP10A4D1E9 387 aaKnown RBP7.19□□□□□ -1.26
PTPRO-208ENST00000542557 LRRIQ3A6PVS8 624 aaPredicted RBP7.19□□□□□ -1.26
PTPRO-208ENST00000542557 GCOM1H8Y6P7 765 aaPredicted RBP7.19□□□□□ -1.26
PTPRO-208ENST00000542557 MEIS1O00470 390 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 POLR2MP0CAP2 368 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 MYBP10242 640 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 ERCC3P19447 782 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 CHRNA5P30532 468 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 HOXA13P31271 388 aaPredicted RBP7.19□□□□□ -1.26
PTPRO-208ENST00000542557 PRKCIP41743 596 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 RASSF7Q02833 373 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 RAD51AP2Q09MP3 1159 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 RAPGEF1Q13905 1077 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 NAB2Q15742 525 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 KLHDC7AQ5VTJ3 777 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 FKBP1CQ5VVH2 108 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 ZNF772Q68DY9 489 aaPredicted RBP7.19□□□□□ -1.26
PTPRO-208ENST00000542557 RSBN1LQ6PCB5 846 aaPredicted RBP7.19□□□□□ -1.26
PTPRO-208ENST00000542557 OTOP1Q7RTM1 612 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 SPATA4Q8NEY3 305 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 COG1Q8WTW3 980 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 CHURC1Q8WUH1 139 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 WDR18Q9BV38 432 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 RUSC1Q9BVN2 902 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 DEFB129Q9H1M3 183 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 KCND2Q9NZV8 630 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 ZBTB21Q9ULJ3 1066 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 PCDHGC5Q9Y5F6 944 aa7.19□□□□□ -1.26
PTPRO-208ENST00000542557 A0A0U1RQG5 324 aaPredicted RBP7.18□□□□□ -1.26
PTPRO-208ENST00000542557 EML1O00423 815 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 TBC1D12O60347 775 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 NR3C1P04150 777 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 EPB41P11171 864 aaKnown RBP7.18□□□□□ -1.26
PTPRO-208ENST00000542557 XRCC5P13010 732 aaKnown RBP7.18□□□□□ -1.26
PTPRO-208ENST00000542557 TNFRSF8P28908 595 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 C2orf54Q08AI8 447 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 KLHL30Q0D2K2 578 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 HSP90B2PQ58FF3 399 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 RINT1Q6NUQ1 792 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 NFRKBQ6P4R8 1299 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 CCNI2Q6ZMN8 369 aaPredicted RBP7.18□□□□□ -1.26
PTPRO-208ENST00000542557 FAM160B2Q86V87 743 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 CYP2W1Q8TAV3 490 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 TBC1D5Q92609 795 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 UIMC1Q96RL1 719 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 CRACR2AQ9BSW2 395 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 MKNK1Q9BUB5 465 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 TLR10Q9BXR5 811 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 ZCCHC17Q9NP64 241 aaKnown RBP7.18□□□□□ -1.26
PTPRO-208ENST00000542557 SEL1LQ9UBV2 794 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 ADAM21Q9UKJ8 722 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 MRPL11Q9Y3B7 192 aaKnown RBP7.18□□□□□ -1.26
PTPRO-208ENST00000542557 CNTNAP1P78357 1384 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 ZC3H4Q9UPT8 1303 aaKnown RBP7.18□□□□□ -1.26
PTPRO-208ENST00000542557 CES2O00748 559 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 AKAP3O75969 853 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 PRPF6O94906 941 aaKnown RBP7.18□□□□□ -1.26
PTPRO-208ENST00000542557 UCHL3P15374 230 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 ECE1P42892 770 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 PAFAH1B1P43034 410 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 PRELPP51888 382 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 ZNF131P52739 623 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 CYP4A11Q02928 519 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 EPHA7Q15375 998 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 EXOC3L4Q17RC7 722 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 SPDYE2Q495Y8 402 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 GLE1Q53GS7 698 aaKnown RBP7.18□□□□□ -1.26
PTPRO-208ENST00000542557 CCDC181Q5TID7 509 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 LRCH2Q5VUJ6 765 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 C1orf186Q6ZWK4 172 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 FAM133AQ8N9E0 248 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 AENQ8WTP8 325 aaKnown RBP7.18□□□□□ -1.26
PTPRO-208ENST00000542557 GMLQ99445 158 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 WDR11Q9BZH6 1224 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 VCPKMTQ9H867 229 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 ZNF70Q9UC06 446 aaPredicted RBP7.18□□□□□ -1.26
PTPRO-208ENST00000542557 HPCAL4Q9UM19 191 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 DAAM1Q9Y4D1 1078 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 ZMYM2Q9UBW7 1377 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 MYH10P35580 1976 aa7.18□□□□□ -1.26
PTPRO-208ENST00000542557 A0A087X0T9 212 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 GRID2IPA4D2P6 1211 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 RSPH10B2B2RC85 870 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 SLITRK3O94933 977 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms