RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 SFNP31947 248 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 IGBP1P78318 339 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 TRIM29Q14134 588 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 DIS3L2Q8IYB7 885 aaKnown RBP17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 RDM1Q8NG50 284 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 TRAPPC12Q8WVT3 735 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 FAM20AQ96MK3 541 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 NAP1L4Q99733 375 aaKnown RBP17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 PBX4Q9BYU1 374 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 OSBPL7Q9BZF2 842 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 TTYH1Q9H313 450 aaPredicted RBP17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 SEMA6BQ9H3T3 888 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 DISC1Q9NRI5 854 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 TCEAL9Q9UHQ7 104 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 PCDHA2Q9Y5H9 948 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 PTPRSQ13332 1948 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 COL1A2P08123 1366 aa17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 ZBBXA8MT70 800 aa17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 CD2BP2O95400 341 aaKnown RBP17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 CHRNA1P02708 482 aa17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 ATP2A2P16615 1042 aaKnown RBP17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 PBX2P40425 430 aa17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 JAK3P52333 1124 aa17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 HMGN5P82970 282 aaKnown RBP17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 MGAT3Q09327 533 aa17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 MKRN4PQ13434 485 aaPredicted RBP17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 PLEKHG4Q58EX7 1191 aa17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 ZNF484Q5JVG2 852 aa17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 ZNF697Q5TEC3 545 aa17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 PHOSPHO2Q8TCD6 241 aa17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 BBXQ8WY36 941 aaPredicted RBP17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 ZBTB10Q96DT7 871 aa17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 BACH2Q9BYV9 841 aa17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 GABBR1Q9UBS5 961 aa17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 EYSQ5T1H1 3165 aa17.45■□□□□ 0.38
ECHDC2-223ENST00000542552 ABHD14A-ACY1A0A1B0GW23 586 aa17.44■□□□□ 0.38
ECHDC2-223ENST00000542552 RBAK-RBAKDNI3L0D1 243 aa17.44■□□□□ 0.38
ECHDC2-223ENST00000542552 TBX3O15119 743 aa17.44■□□□□ 0.38
ECHDC2-223ENST00000542552 ZNF862O60290 1169 aa17.44■□□□□ 0.38
ECHDC2-223ENST00000542552 CCNT1O60563 726 aaKnown RBP17.44■□□□□ 0.38
ECHDC2-223ENST00000542552 RPLP2P05387 115 aaKnown RBP17.44■□□□□ 0.38
ECHDC2-223ENST00000542552 CTSHP09668 335 aa17.44■□□□□ 0.38
ECHDC2-223ENST00000542552 MTHFD1LQ6UB35 978 aa17.44■□□□□ 0.38
ECHDC2-223ENST00000542552 RSPH3Q86UC2 560 aa17.44■□□□□ 0.38
ECHDC2-223ENST00000542552 FBXO18Q8NFZ0 1043 aa17.44■□□□□ 0.38
ECHDC2-223ENST00000542552 DNAJB3Q8WWF6 145 aa17.44■□□□□ 0.38
ECHDC2-223ENST00000542552 HAS1Q92839 578 aa17.44■□□□□ 0.38
ECHDC2-223ENST00000542552 TIFAQ96CG3 184 aa17.44■□□□□ 0.38
ECHDC2-223ENST00000542552 SLC9A7Q96T83 725 aa17.44■□□□□ 0.38
ECHDC2-223ENST00000542552 VAV3Q9UKW4 847 aa17.44■□□□□ 0.38
ECHDC2-223ENST00000542552 SAMM50Q9Y512 469 aa17.44■□□□□ 0.38
ECHDC2-223ENST00000542552 SMIM35A0A1B0GVV1 85 aa17.43■□□□□ 0.38
ECHDC2-223ENST00000542552 KLRC1P26715 233 aa17.43■□□□□ 0.38
ECHDC2-223ENST00000542552 FOSBP53539 338 aa17.43■□□□□ 0.38
ECHDC2-223ENST00000542552 WDR5P61964 334 aaKnown RBP17.43■□□□□ 0.38
ECHDC2-223ENST00000542552 IKBKEQ14164 716 aa17.43■□□□□ 0.38
ECHDC2-223ENST00000542552 RAB30Q15771 203 aa17.43■□□□□ 0.38
ECHDC2-223ENST00000542552 UGCGQ16739 394 aa17.43■□□□□ 0.38
ECHDC2-223ENST00000542552 DBF4BQ8NFT6 615 aa17.43■□□□□ 0.38
ECHDC2-223ENST00000542552 C8orf76Q96K31 380 aa17.43■□□□□ 0.38
ECHDC2-223ENST00000542552 GUCD1Q96NT3 240 aa17.43■□□□□ 0.38
ECHDC2-223ENST00000542552 PCDHA11Q9Y5I1 949 aa17.43■□□□□ 0.38
ECHDC2-223ENST00000542552 GTF3C3Q9Y5Q9 886 aa17.43■□□□□ 0.38
ECHDC2-223ENST00000542552 MICAL3Q7RTP6 2002 aa17.43■□□□□ 0.38
ECHDC2-223ENST00000542552 EVPLQ92817 2033 aa17.42■□□□□ 0.38
ECHDC2-223ENST00000542552 CHMP2AO43633 222 aa17.42■□□□□ 0.38
ECHDC2-223ENST00000542552 EFCAB14O75071 495 aa17.42■□□□□ 0.38
ECHDC2-223ENST00000542552 MCM2P49736 904 aa17.42■□□□□ 0.38
ECHDC2-223ENST00000542552 MRPS6P82932 125 aaKnown RBP17.42■□□□□ 0.38
ECHDC2-223ENST00000542552 GUCY1B3Q02153 619 aa17.42■□□□□ 0.38
ECHDC2-223ENST00000542552 PPP2R5CQ13362 524 aa17.42■□□□□ 0.38
ECHDC2-223ENST00000542552 MIER3Q7Z3K6 550 aa17.42■□□□□ 0.38
ECHDC2-223ENST00000542552 POTEDQ86YR6 584 aa17.42■□□□□ 0.38
ECHDC2-223ENST00000542552 HERC6Q8IVU3 1022 aa17.42■□□□□ 0.38
ECHDC2-223ENST00000542552 CKAP2LQ8IYA6 745 aa17.42■□□□□ 0.38
ECHDC2-223ENST00000542552 TMX3Q96JJ7 454 aa17.42■□□□□ 0.38
ECHDC2-223ENST00000542552 FAM167AQ96KS9 214 aa17.42■□□□□ 0.38
ECHDC2-223ENST00000542552 FAM161BQ96MY7 647 aa17.42■□□□□ 0.38
ECHDC2-223ENST00000542552 MSRAQ9UJ68 235 aa17.42■□□□□ 0.38
ECHDC2-223ENST00000542552 YBX2Q9Y2T7 364 aaKnown RBP17.42■□□□□ 0.38
ECHDC2-223ENST00000542552 WNT7AO00755 349 aa17.41■□□□□ 0.38
ECHDC2-223ENST00000542552 STBD1O95210 358 aa17.41■□□□□ 0.38
ECHDC2-223ENST00000542552 C22orf31O95567 290 aa17.41■□□□□ 0.38
ECHDC2-223ENST00000542552 OATP04181 439 aa17.41■□□□□ 0.38
ECHDC2-223ENST00000542552 KCNJ6P48051 423 aa17.41■□□□□ 0.38
ECHDC2-223ENST00000542552 RABGGTBP53611 331 aa17.41■□□□□ 0.38
ECHDC2-223ENST00000542552 SAFBQ15424 915 aaKnown RBP eCLIP17.41■□□□□ 0.38
ECHDC2-223ENST00000542552 KIAA0319LQ8IZA0 1049 aa17.41■□□□□ 0.38
ECHDC2-223ENST00000542552 NME8Q8N427 588 aa17.41■□□□□ 0.38
ECHDC2-223ENST00000542552 SEPT8Q92599 483 aa17.41■□□□□ 0.38
ECHDC2-223ENST00000542552 FAM49AQ9H0Q0 323 aaPredicted RBP17.41■□□□□ 0.38
ECHDC2-223ENST00000542552 FOXP1Q9H334 677 aaPredicted RBP17.41■□□□□ 0.38
ECHDC2-223ENST00000542552 CDY2AQ9Y6F7 541 aa17.41■□□□□ 0.38
ECHDC2-223ENST00000542552 EML1O00423 815 aa17.4■□□□□ 0.38
ECHDC2-223ENST00000542552 DEFB103AP81534 67 aa17.4■□□□□ 0.38
ECHDC2-223ENST00000542552 PRKCEQ02156 737 aa17.4■□□□□ 0.38
ECHDC2-223ENST00000542552 SPIRE1Q08AE8 756 aa17.4■□□□□ 0.38
ECHDC2-223ENST00000542552 LPIN1Q14693 890 aa17.4■□□□□ 0.38
ECHDC2-223ENST00000542552 FBXO47Q5MNV8 452 aa17.4■□□□□ 0.38
ECHDC2-223ENST00000542552 IER5Q5VY09 327 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms