RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 GABBR1Q9UBS5 961 aa13.03□□□□□ -0.32
C2CD3-217ENST00000542452 VAV3Q9UKW4 847 aa13.03□□□□□ -0.32
C2CD3-217ENST00000542452 YBX2Q9Y2T7 364 aaKnown RBP13.03□□□□□ -0.32
C2CD3-217ENST00000542452 PCDHA10Q9Y5I2 948 aa13.03□□□□□ -0.32
C2CD3-217ENST00000542452 WDR64B1ANS9 1081 aa13.02□□□□□ -0.33
C2CD3-217ENST00000542452 KIF28PB7ZC32 967 aa13.02□□□□□ -0.33
C2CD3-217ENST00000542452 CCNT1O60563 726 aaKnown RBP13.02□□□□□ -0.33
C2CD3-217ENST00000542452 CAND2O75155 1236 aa13.02□□□□□ -0.33
C2CD3-217ENST00000542452 CHRNA1P02708 482 aa13.02□□□□□ -0.33
C2CD3-217ENST00000542452 PSAPP07602 524 aa13.02□□□□□ -0.33
C2CD3-217ENST00000542452 GNAT1P11488 350 aa13.02□□□□□ -0.33
C2CD3-217ENST00000542452 RABGGTBP53611 331 aa13.02□□□□□ -0.33
C2CD3-217ENST00000542452 WDR5P61964 334 aaKnown RBP13.02□□□□□ -0.33
C2CD3-217ENST00000542452 DEFB103AP81534 67 aa13.02□□□□□ -0.33
C2CD3-217ENST00000542452 FAM26DQ5JW98 314 aa13.02□□□□□ -0.33
C2CD3-217ENST00000542452 FAM160B1Q5W0V3 765 aa13.02□□□□□ -0.33
C2CD3-217ENST00000542452 PPP4R3AQ6IN85 833 aa13.02□□□□□ -0.33
C2CD3-217ENST00000542452 PDXDC2PQ6P474 469 aa13.02□□□□□ -0.33
C2CD3-217ENST00000542452 CNKSR3Q6P9H4 555 aa13.02□□□□□ -0.33
C2CD3-217ENST00000542452 TMCO2Q7Z6W1 182 aaPredicted RBP13.02□□□□□ -0.33
C2CD3-217ENST00000542452 DNAJB3Q8WWF6 145 aa13.02□□□□□ -0.33
C2CD3-217ENST00000542452 TMX3Q96JJ7 454 aa13.02□□□□□ -0.33
C2CD3-217ENST00000542452 FTOQ9C0B1 505 aaKnown RBP eCLIP13.02□□□□□ -0.33
C2CD3-217ENST00000542452 UPF2Q9HAU5 1272 aaKnown RBP13.02□□□□□ -0.33
C2CD3-217ENST00000542452 DISC1Q9NRI5 854 aa13.02□□□□□ -0.33
C2CD3-217ENST00000542452 MTMR10Q9NXD2 777 aa13.02□□□□□ -0.33
C2CD3-217ENST00000542452 COL4A6Q14031 1691 aa13.02□□□□□ -0.33
C2CD3-217ENST00000542452 RRN3P2A6NIE6 340 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 EML1O00423 815 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 ST18O60284 1047 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 ARHGEF15O94989 841 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 STBD1O95210 358 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 C22orf31O95567 290 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 MYOGP15173 224 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 SLC26A2P50443 739 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 PRKCEQ02156 737 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 ZNF697Q5TEC3 545 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 TAF2Q6P1X5 1199 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 MTHFD1LQ6UB35 978 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 RPAINQ86UA6 219 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 DBF4BQ8NFT6 615 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 C8orf76Q96K31 380 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 FAM49AQ9H0Q0 323 aaPredicted RBP13.01□□□□□ -0.33
C2CD3-217ENST00000542452 MTIF3Q9H2K0 278 aaKnown RBP13.01□□□□□ -0.33
C2CD3-217ENST00000542452 NKX2-4Q9H2Z4 354 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 BRMS1Q9HCU9 246 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 SLC4A7Q9Y6M7 1214 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 COL1A2P08123 1366 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 CHD9Q3L8U1 2897 aa13.01□□□□□ -0.33
C2CD3-217ENST00000542452 TMEM150BA6NC51 233 aa13□□□□□ -0.33
C2CD3-217ENST00000542452 HBP1O60381 514 aa13□□□□□ -0.33
C2CD3-217ENST00000542452 BAIAP3O94812 1187 aa13□□□□□ -0.33
C2CD3-217ENST00000542452 PARNO95453 639 aaKnown RBP13□□□□□ -0.33
C2CD3-217ENST00000542452 OATP04181 439 aa13□□□□□ -0.33
C2CD3-217ENST00000542452 ACTN1P12814 892 aa13□□□□□ -0.33
C2CD3-217ENST00000542452 GCFC2P16383 781 aaKnown RBP13□□□□□ -0.33
C2CD3-217ENST00000542452 ATP2A2P16615 1042 aaKnown RBP13□□□□□ -0.33
C2CD3-217ENST00000542452 JAK3P52333 1124 aa13□□□□□ -0.33
C2CD3-217ENST00000542452 HMGN5P82970 282 aaKnown RBP13□□□□□ -0.33
C2CD3-217ENST00000542452 SPIRE1Q08AE8 756 aa13□□□□□ -0.33
C2CD3-217ENST00000542452 TMEM62Q0P6H9 643 aa13□□□□□ -0.33
C2CD3-217ENST00000542452 PLEKHG4Q58EX7 1191 aa13□□□□□ -0.33
C2CD3-217ENST00000542452 TRMT1LQ7Z2T5 733 aaKnown RBP13□□□□□ -0.33
C2CD3-217ENST00000542452 MIER3Q7Z3K6 550 aa13□□□□□ -0.33
C2CD3-217ENST00000542452 LINC01465Q8N7H1 131 aa13□□□□□ -0.33
C2CD3-217ENST00000542452 TIFAQ96CG3 184 aa13□□□□□ -0.33
C2CD3-217ENST00000542452 SLC9A7Q96T83 725 aa13□□□□□ -0.33
C2CD3-217ENST00000542452 WRAP73Q9P2S5 460 aaPredicted RBP13□□□□□ -0.33
C2CD3-217ENST00000542452 SAMM50Q9Y512 469 aa13□□□□□ -0.33
C2CD3-217ENST00000542452 PCDHA2Q9Y5H9 948 aa13□□□□□ -0.33
C2CD3-217ENST00000542452 CDY2AQ9Y6F7 541 aa13□□□□□ -0.33
C2CD3-217ENST00000542452 SMIM35A0A1B0GVV1 85 aa12.99□□□□□ -0.33
C2CD3-217ENST00000542452 GHRP10912 638 aa12.99□□□□□ -0.33
C2CD3-217ENST00000542452 SFNP31947 248 aa12.99□□□□□ -0.33
C2CD3-217ENST00000542452 MRPS6P82932 125 aaKnown RBP12.99□□□□□ -0.33
C2CD3-217ENST00000542452 PPP2R5CQ13362 524 aa12.99□□□□□ -0.33
C2CD3-217ENST00000542452 TRIM29Q14134 588 aa12.99□□□□□ -0.33
C2CD3-217ENST00000542452 LPIN1Q14693 890 aa12.99□□□□□ -0.33
C2CD3-217ENST00000542452 ZNF484Q5JVG2 852 aa12.99□□□□□ -0.33
C2CD3-217ENST00000542452 FBXO47Q5MNV8 452 aa12.99□□□□□ -0.33
C2CD3-217ENST00000542452 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.99□□□□□ -0.33
C2CD3-217ENST00000542452 SPRED2Q7Z698 418 aa12.99□□□□□ -0.33
C2CD3-217ENST00000542452 BANK1Q8NDB2 785 aa12.99□□□□□ -0.33
C2CD3-217ENST00000542452 FBXO18Q8NFZ0 1043 aa12.99□□□□□ -0.33
C2CD3-217ENST00000542452 RDM1Q8NG50 284 aa12.99□□□□□ -0.33
C2CD3-217ENST00000542452 LINC01599Q8WXQ3 324 aa12.99□□□□□ -0.33
C2CD3-217ENST00000542452 BBXQ8WY36 941 aaPredicted RBP12.99□□□□□ -0.33
C2CD3-217ENST00000542452 CEP89Q96ST8 783 aa12.99□□□□□ -0.33
C2CD3-217ENST00000542452 TMEM60Q9H2L4 133 aa12.99□□□□□ -0.33
C2CD3-217ENST00000542452 SEMA6BQ9H3T3 888 aa12.99□□□□□ -0.33
C2CD3-217ENST00000542452 TCEAL9Q9UHQ7 104 aa12.99□□□□□ -0.33
C2CD3-217ENST00000542452 TMEM265A0A087WTH1 108 aa12.98□□□□□ -0.33
C2CD3-217ENST00000542452 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.98□□□□□ -0.33
C2CD3-217ENST00000542452 TBX3O15119 743 aa12.98□□□□□ -0.33
C2CD3-217ENST00000542452 KLRC1P26715 233 aa12.98□□□□□ -0.33
C2CD3-217ENST00000542452 GRIN2CQ14957 1233 aa12.98□□□□□ -0.33
C2CD3-217ENST00000542452 HERC6Q8IVU3 1022 aa12.98□□□□□ -0.33
C2CD3-217ENST00000542452 CKAP2LQ8IYA6 745 aa12.98□□□□□ -0.33
C2CD3-217ENST00000542452 FAM20AQ96MK3 541 aa12.98□□□□□ -0.33
C2CD3-217ENST00000542452 SH2D3AQ9BRG2 576 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms