RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 MAGEA10P43363 369 aaPredicted RBP5.43□□□□□ -1.54
LEMD3-204ENST00000542032 DNM2P50570 870 aa5.43□□□□□ -1.54
LEMD3-204ENST00000542032 PPP2CBP62714 309 aa5.43□□□□□ -1.54
LEMD3-204ENST00000542032 PPP2CAP67775 309 aa5.43□□□□□ -1.54
LEMD3-204ENST00000542032 FNDC3BQ53EP0 1204 aaKnown RBP5.43□□□□□ -1.54
LEMD3-204ENST00000542032 TM4SF20Q53R12 229 aa5.43□□□□□ -1.54
LEMD3-204ENST00000542032 REXO1L1PQ8IX06 675 aa5.43□□□□□ -1.54
LEMD3-204ENST00000542032 UBXN4Q92575 508 aa5.43□□□□□ -1.54
LEMD3-204ENST00000542032 DLG3Q92796 817 aa5.43□□□□□ -1.54
LEMD3-204ENST00000542032 CLUHP3Q96NS8 147 aa5.43□□□□□ -1.54
LEMD3-204ENST00000542032 TACO1Q9BSH4 297 aaKnown RBP5.43□□□□□ -1.54
LEMD3-204ENST00000542032 C1QTNF3Q9BXJ4 246 aa5.43□□□□□ -1.54
LEMD3-204ENST00000542032 COQ6Q9Y2Z9 468 aa5.43□□□□□ -1.54
LEMD3-204ENST00000542032 H0Y858 1186 aa5.42□□□□□ -1.54
LEMD3-204ENST00000542032 KCNK3O14649 394 aa5.42□□□□□ -1.54
LEMD3-204ENST00000542032 PTGS1P23219 599 aa5.42□□□□□ -1.54
LEMD3-204ENST00000542032 SDHAP31040 664 aa5.42□□□□□ -1.54
LEMD3-204ENST00000542032 MECP2P51608 486 aaKnown RBP5.42□□□□□ -1.54
LEMD3-204ENST00000542032 ADAM17P78536 824 aa5.42□□□□□ -1.54
LEMD3-204ENST00000542032 BMS1Q14692 1282 aaKnown RBP5.42□□□□□ -1.54
LEMD3-204ENST00000542032 STILQ15468 1287 aa5.42□□□□□ -1.54
LEMD3-204ENST00000542032 OTOP1Q7RTM1 612 aa5.42□□□□□ -1.54
LEMD3-204ENST00000542032 CISD2Q8N5K1 135 aaKnown RBP5.42□□□□□ -1.54
LEMD3-204ENST00000542032 WNK4Q96J92 1243 aa5.42□□□□□ -1.54
LEMD3-204ENST00000542032 MEGF9Q9H1U4 602 aa5.42□□□□□ -1.54
LEMD3-204ENST00000542032 KANSL2Q9H9L4 492 aa5.42□□□□□ -1.54
LEMD3-204ENST00000542032 TMEM260Q9NX78 707 aa5.42□□□□□ -1.54
LEMD3-204ENST00000542032 GALNT8Q9NY28 637 aa5.42□□□□□ -1.54
LEMD3-204ENST00000542032 B3GALT1Q9Y5Z6 326 aa5.42□□□□□ -1.54
LEMD3-204ENST00000542032 CUTAO60888 179 aa5.41□□□□□ -1.54
LEMD3-204ENST00000542032 ZBTB48P10074 688 aaPredicted RBP5.41□□□□□ -1.54
LEMD3-204ENST00000542032 POLD1P28340 1107 aa5.41□□□□□ -1.54
LEMD3-204ENST00000542032 IL13RA1P78552 427 aa5.41□□□□□ -1.54
LEMD3-204ENST00000542032 TOP3AQ13472 1001 aaPredicted RBP5.41□□□□□ -1.54
LEMD3-204ENST00000542032 ZNF827Q17R98 1081 aa5.41□□□□□ -1.54
LEMD3-204ENST00000542032 CPZQ66K79 652 aa5.41□□□□□ -1.54
LEMD3-204ENST00000542032 CXXC5Q7LFL8 322 aaKnown RBP5.41□□□□□ -1.54
LEMD3-204ENST00000542032 LIMS2Q7Z4I7 341 aa5.41□□□□□ -1.54
LEMD3-204ENST00000542032 DNERQ8NFT8 737 aa5.41□□□□□ -1.54
LEMD3-204ENST00000542032 AMNQ9BXJ7 453 aa5.41□□□□□ -1.54
LEMD3-204ENST00000542032 KCNH7Q9NS40 1196 aa5.41□□□□□ -1.54
LEMD3-204ENST00000542032 SLC4A7Q9Y6M7 1214 aa5.41□□□□□ -1.54
LEMD3-204ENST00000542032 RASSF10A6NK89 507 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 GPR42O15529 346 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 B4GALT4O60513 344 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 RAPGEF3O95398 923 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 CNOT4O95628 575 aaKnown RBP5.4□□□□□ -1.54
LEMD3-204ENST00000542032 SLPIP03973 132 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 MC4RP32245 332 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 CCDC144BQ3MJ40 725 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 TMEM177Q53S58 311 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 SLFN13Q68D06 897 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 DPP8Q6V1X1 898 aaPredicted RBP5.4□□□□□ -1.54
LEMD3-204ENST00000542032 ARHGEF18Q6ZSZ5 1173 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 RALYLQ86SE5 291 aaKnown RBP5.4□□□□□ -1.54
LEMD3-204ENST00000542032 IGSF22Q8N9C0 903 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 SH3TC2Q8TF17 1288 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 MRFAP1L1Q96HT8 127 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 BTBD2Q9BX70 525 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 ZSWIM4Q9H7M6 989 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 SEC61A2Q9H9S3 476 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 INCENPQ9NQS7 918 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 SMPD4Q9NXE4 827 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 ARHGAP28Q9P2N2 729 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 ZDHHC9Q9Y397 364 aa5.4□□□□□ -1.54
LEMD3-204ENST00000542032 SLC12A8A0AV02 714 aa5.39□□□□□ -1.55
LEMD3-204ENST00000542032 PRAMEF25A6NGN4 478 aa5.39□□□□□ -1.55
LEMD3-204ENST00000542032 C1QTNF3-AMACRE9PGA6 284 aa5.39□□□□□ -1.55
LEMD3-204ENST00000542032 SCDO00767 359 aa5.39□□□□□ -1.55
LEMD3-204ENST00000542032 RFPL3O75679 317 aa5.39□□□□□ -1.55
LEMD3-204ENST00000542032 DNAJC8O75937 253 aaPredicted RBP5.39□□□□□ -1.55
LEMD3-204ENST00000542032 ETV4P43268 484 aa5.39□□□□□ -1.55
LEMD3-204ENST00000542032 KANK2Q63ZY3 851 aa5.39□□□□□ -1.55
LEMD3-204ENST00000542032 ZCCHC8Q6NZY4 707 aaKnown RBP5.39□□□□□ -1.55
LEMD3-204ENST00000542032 EP400NLQ6ZTU2 488 aa5.39□□□□□ -1.55
LEMD3-204ENST00000542032 ASB15Q8WXK1 588 aa5.39□□□□□ -1.55
LEMD3-204ENST00000542032 PTPN18Q99952 460 aa5.39□□□□□ -1.55
LEMD3-204ENST00000542032 ZDHHC5Q9C0B5 715 aa5.39□□□□□ -1.55
LEMD3-204ENST00000542032 PIF1Q9H611 641 aa5.39□□□□□ -1.55
LEMD3-204ENST00000542032 CD248Q9HCU0 757 aa5.39□□□□□ -1.55
LEMD3-204ENST00000542032 ASB1Q9Y576 335 aa5.39□□□□□ -1.55
LEMD3-204ENST00000542032 ZNF536O15090 1300 aa5.39□□□□□ -1.55
LEMD3-204ENST00000542032 MAFO75444 373 aaPredicted RBP5.38□□□□□ -1.55
LEMD3-204ENST00000542032 ASLP04424 464 aa5.38□□□□□ -1.55
LEMD3-204ENST00000542032 APPP05067 770 aa5.38□□□□□ -1.55
LEMD3-204ENST00000542032 MMEP08473 750 aa5.38□□□□□ -1.55
LEMD3-204ENST00000542032 ZNF888P0CJ79 500 aaPredicted RBP5.38□□□□□ -1.55
LEMD3-204ENST00000542032 IGFALSP35858 605 aa5.38□□□□□ -1.55
LEMD3-204ENST00000542032 USP10Q14694 798 aaKnown RBP5.38□□□□□ -1.55
LEMD3-204ENST00000542032 CATSPEREQ5SY80 951 aa5.38□□□□□ -1.55
LEMD3-204ENST00000542032 GLB1LQ6UWU2 654 aa5.38□□□□□ -1.55
LEMD3-204ENST00000542032 CARD11Q9BXL7 1154 aa5.38□□□□□ -1.55
LEMD3-204ENST00000542032 FBXO10Q9UK96 956 aa5.38□□□□□ -1.55
LEMD3-204ENST00000542032 PTPN22Q9Y2R2 807 aa5.38□□□□□ -1.55
LEMD3-204ENST00000542032 ESYT3A0FGR9 886 aa5.37□□□□□ -1.55
LEMD3-204ENST00000542032 NPEPPSL1A6NEC2 478 aa5.37□□□□□ -1.55
LEMD3-204ENST00000542032 PATE3B3GLJ2 98 aa5.37□□□□□ -1.55
LEMD3-204ENST00000542032 B4E1Z4 1266 aa5.37□□□□□ -1.55
LEMD3-204ENST00000542032 GOLGA6L22H0YM25 854 aa5.37□□□□□ -1.55
LEMD3-204ENST00000542032 FOXP2O15409 715 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms