RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 MMRN2Q9H8L6 949 aa10.02□□□□□ -0.81
THBS3-211ENST00000541990 ZNF287Q9HBT7 754 aa10.02□□□□□ -0.81
THBS3-211ENST00000541990 CNOT8Q9UFF9 292 aaKnown RBP10.02□□□□□ -0.81
THBS3-211ENST00000541990 SIK3Q9Y2K2 1263 aa10.02□□□□□ -0.81
THBS3-211ENST00000541990 RAD51CO43502 376 aa10.02□□□□□ -0.81
THBS3-211ENST00000541990 FAM107AO95990 144 aa10.02□□□□□ -0.81
THBS3-211ENST00000541990 NDUFB10O96000 172 aa10.02□□□□□ -0.81
THBS3-211ENST00000541990 PAX7P23759 505 aa10.02□□□□□ -0.81
THBS3-211ENST00000541990 TNFRSF8P28908 595 aa10.02□□□□□ -0.81
THBS3-211ENST00000541990 NAPAP54920 295 aa10.02□□□□□ -0.81
THBS3-211ENST00000541990 PDE4DQ08499 809 aa10.02□□□□□ -0.81
THBS3-211ENST00000541990 KLHL7Q8IXQ5 586 aa10.02□□□□□ -0.81
THBS3-211ENST00000541990 KIAA0895Q8NCT3 520 aa10.02□□□□□ -0.81
THBS3-211ENST00000541990 SCLT1Q96NL6 688 aa10.02□□□□□ -0.81
THBS3-211ENST00000541990 PAGR1Q9BTK6 254 aa10.02□□□□□ -0.81
THBS3-211ENST00000541990 NEUROG2Q9H2A3 272 aa10.02□□□□□ -0.81
THBS3-211ENST00000541990 SEMA6BQ9H3T3 888 aa10.02□□□□□ -0.81
THBS3-211ENST00000541990 TPX2Q9ULW0 747 aaKnown RBP10.02□□□□□ -0.81
THBS3-211ENST00000541990 NAV1Q8NEY1 1877 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 IGKV6D-41A0A0C4DH26 115 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 CCDC189A1A4V9 331 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 USP17L15C9J2P7 530 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 USP17L13C9JLJ4 530 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 ADM5C9JUS6 153 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 USP17L11C9JVI0 530 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 USP17L18D6R9N7 530 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 USP17L22D6RA61 530 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 USP17L17D6RBQ6 530 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 USP17L19D6RCP7 530 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 USP17L20D6RJB6 530 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 PALMO75781 387 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 PCP11498 1178 aaKnown RBP10.01□□□□□ -0.81
THBS3-211ENST00000541990 PLCG1P19174 1290 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 KIF5BP33176 963 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 PAFAH1B1P43034 410 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 USP17L24Q0WX57 530 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 NEDD9Q14511 834 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 TNIP1Q15025 636 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 UAP1Q16222 522 aaPredicted RBP10.01□□□□□ -0.81
THBS3-211ENST00000541990 PFKFB3Q16875 520 aaPredicted RBP10.01□□□□□ -0.81
THBS3-211ENST00000541990 FAM83BQ5T0W9 1011 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 USP17L6PQ6QN14 398 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 FUKQ8N0W3 1084 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 AGBL3Q8NEM8 1001 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 TBC1D5Q92609 795 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 CCDC114Q96M63 670 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 ALS2CR12Q96Q35 445 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 PACSIN1Q9BY11 444 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 JMJD4Q9H9V9 463 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 KBTBD4Q9NVX7 518 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 ODF2LQ9ULJ1 636 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 PRLRP16471 622 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 CCNE1P24864 410 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 ECHS1P30084 290 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 RDXP35241 583 aaKnown RBP10.01□□□□□ -0.81
THBS3-211ENST00000541990 LONP1P36776 959 aaKnown RBP10.01□□□□□ -0.81
THBS3-211ENST00000541990 FLT3P36888 993 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 RCAN1P53805 252 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 UBXN2AP68543 259 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 KCNB1Q14721 858 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 ENOX2Q16206 610 aaKnown RBP10.01□□□□□ -0.81
THBS3-211ENST00000541990 SOGA3Q5TF21 947 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 CYB5D1Q6P9G0 228 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 CCDC174Q6PII3 467 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 YTHDF3Q7Z739 585 aaKnown RBP10.01□□□□□ -0.81
THBS3-211ENST00000541990 IFT20Q8IY31 132 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 GLIS3Q8NEA6 775 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 FAM151AQ8WW52 585 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 BAP1Q92560 729 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 MIEF2Q96C03 454 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 ERGIC2Q96RQ1 377 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 NUP58Q9BVL2 599 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 DHX36Q9H2U1 1008 aaKnown RBP10.01□□□□□ -0.81
THBS3-211ENST00000541990 SLC39A2Q9NP94 309 aa10.01□□□□□ -0.81
THBS3-211ENST00000541990 RBM28Q9NW13 759 aaKnown RBP10.01□□□□□ -0.81
THBS3-211ENST00000541990 SMCO2A6NFE2 343 aa10□□□□□ -0.81
THBS3-211ENST00000541990 SMCHD1A6NHR9 2005 aa10□□□□□ -0.81
THBS3-211ENST00000541990 CALM1P0DP23 149 aa10□□□□□ -0.81
THBS3-211ENST00000541990 CALM2P0DP24 149 aa10□□□□□ -0.81
THBS3-211ENST00000541990 CALM3P0DP25 149 aa10□□□□□ -0.81
THBS3-211ENST00000541990 ERVK-9P63128 1117 aa10□□□□□ -0.81
THBS3-211ENST00000541990 ASIC1P78348 528 aa10□□□□□ -0.81
THBS3-211ENST00000541990 PAK2Q13177 524 aa10□□□□□ -0.81
THBS3-211ENST00000541990 EAPPQ56P03 285 aaPredicted RBP10□□□□□ -0.81
THBS3-211ENST00000541990 TATDN1Q6P1N9 297 aa10□□□□□ -0.81
THBS3-211ENST00000541990 TEPSINQ96N21 525 aa10□□□□□ -0.81
THBS3-211ENST00000541990 KANSL2Q9H9L4 492 aa10□□□□□ -0.81
THBS3-211ENST00000541990 SLC24A3Q9HC58 644 aa10□□□□□ -0.81
THBS3-211ENST00000541990 NLRC4Q9NPP4 1024 aa10□□□□□ -0.81
THBS3-211ENST00000541990 TCP11L1Q9NUJ3 509 aa10□□□□□ -0.81
THBS3-211ENST00000541990 STXBP3O00186 592 aa10□□□□□ -0.81
THBS3-211ENST00000541990 PPP1R12BO60237 982 aaPredicted RBP10□□□□□ -0.81
THBS3-211ENST00000541990 HOXA13P31271 388 aaPredicted RBP10□□□□□ -0.81
THBS3-211ENST00000541990 CDK17Q00537 523 aa10□□□□□ -0.81
THBS3-211ENST00000541990 ZNF543Q08ER8 600 aa10□□□□□ -0.81
THBS3-211ENST00000541990 ASTE1Q2TB18 679 aaPredicted RBP10□□□□□ -0.81
THBS3-211ENST00000541990 ACCSLQ4AC99 568 aa10□□□□□ -0.81
THBS3-211ENST00000541990 ANKRD20A8PQ5CZ79 823 aa10□□□□□ -0.81
THBS3-211ENST00000541990 MICALCLQ6ZW33 695 aa10□□□□□ -0.81
THBS3-211ENST00000541990 PARP9Q8IXQ6 854 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms