RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 NAPBQ9H115 298 aa11.37□□□□□ -0.59
CHFR-220ENST00000541817 TBC1D17Q9HA65 648 aa11.37□□□□□ -0.59
CHFR-220ENST00000541817 DUSP12Q9UNI6 340 aa11.37□□□□□ -0.59
CHFR-220ENST00000541817 PKD1L2Q7Z442 2459 aa11.37□□□□□ -0.59
CHFR-220ENST00000541817 FSD2A1L4K1 749 aa11.36□□□□□ -0.59
CHFR-220ENST00000541817 NOP56O00567 594 aaKnown RBP11.36□□□□□ -0.59
CHFR-220ENST00000541817 CLASP2O75122 1294 aaKnown RBP11.36□□□□□ -0.59
CHFR-220ENST00000541817 SDHBP21912 280 aa11.36□□□□□ -0.59
CHFR-220ENST00000541817 ITIH3Q06033 890 aa11.36□□□□□ -0.59
CHFR-220ENST00000541817 ZNF543Q08ER8 600 aa11.36□□□□□ -0.59
CHFR-220ENST00000541817 TMEM266Q2M3C6 531 aa11.36□□□□□ -0.59
CHFR-220ENST00000541817 HSP90AB4PQ58FF6 505 aa11.36□□□□□ -0.59
CHFR-220ENST00000541817 ZKSCAN2Q63HK3 967 aa11.36□□□□□ -0.59
CHFR-220ENST00000541817 PDE12Q6L8Q7 609 aaKnown RBP11.36□□□□□ -0.59
CHFR-220ENST00000541817 TMC5Q6UXY8 1006 aa11.36□□□□□ -0.59
CHFR-220ENST00000541817 TMC7Q7Z402 723 aa11.36□□□□□ -0.59
CHFR-220ENST00000541817 MAML2Q8IZL2 1156 aaPredicted RBP11.36□□□□□ -0.59
CHFR-220ENST00000541817 MRPS27Q92552 414 aaKnown RBP11.36□□□□□ -0.59
CHFR-220ENST00000541817 FAM49AQ9H0Q0 323 aaPredicted RBP11.36□□□□□ -0.59
CHFR-220ENST00000541817 KCNK12Q9HB15 430 aa11.36□□□□□ -0.59
CHFR-220ENST00000541817 PARD6AQ9NPB6 346 aa11.36□□□□□ -0.59
CHFR-220ENST00000541817 RNF216Q9NWF9 866 aaPredicted RBP11.36□□□□□ -0.59
CHFR-220ENST00000541817 CCDC171Q6TFL3 1326 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 CACNA1IQ9P0X4 2223 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 RNF113AO15541 343 aaKnown RBP11.35□□□□□ -0.59
CHFR-220ENST00000541817 MGEA5O60502 916 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 TOP1P11387 765 aaKnown RBP11.35□□□□□ -0.59
CHFR-220ENST00000541817 GLULP15104 373 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 GNAT2P19087 354 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 NOVP48745 357 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 DMWDQ09019 674 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 TBC1D8BQ0IIM8 1120 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 CDC37Q16543 378 aaPredicted RBP11.35□□□□□ -0.59
CHFR-220ENST00000541817 RRP12Q5JTH9 1297 aaKnown RBP11.35□□□□□ -0.59
CHFR-220ENST00000541817 PPP4R3BQ5MIZ7 849 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 ATAT1Q5SQI0 421 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 C20orf194Q5TEA3 1177 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 TSHZ3Q63HK5 1081 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 KIAA1841Q6NSI8 718 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 CYFIP1Q7L576 1253 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 ST13P5Q8NFI4 369 aaPredicted RBP11.35□□□□□ -0.59
CHFR-220ENST00000541817 PDCD2LQ9BRP1 358 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 TMX1Q9H3N1 280 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 CWH43Q9H720 699 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 TOMM22Q9NS69 142 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 DLGAP2Q9P1A6 1054 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 PADI3Q9ULW8 664 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 PCDHB7Q9Y5E2 793 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 ABCB11O95342 1321 aa11.35□□□□□ -0.59
CHFR-220ENST00000541817 GPR179Q6PRD1 2367 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 DENND4AQ7Z401 1863 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 FRYQ5TBA9 3013 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 COL4A3Q01955 1670 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 PRR5-ARHGAP8B1AHC4 643 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 SMARCA5O60264 1052 aaPredicted RBP11.34□□□□□ -0.59
CHFR-220ENST00000541817 HSPD1P10809 573 aaKnown RBP11.34□□□□□ -0.59
CHFR-220ENST00000541817 FGFR1P11362 822 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 EPCAMP16422 314 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 TGM1P22735 817 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 MARK3P27448 753 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 PDE4AP27815 886 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 HOXA13P31271 388 aaPredicted RBP11.34□□□□□ -0.59
CHFR-220ENST00000541817 IGBP1P78318 339 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 ARHGAP8P85298 464 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 LMNB2Q03252 620 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 XRRA1Q6P2D8 792 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 AUTS2Q8WXX7 1259 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 GPR20Q99678 358 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 USP26Q9BXU7 913 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 NACAP1Q9BZK3 213 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 FOXQ1Q9C009 403 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 VAT1LQ9HCJ6 419 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 SIT1Q9Y3P8 196 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.34□□□□□ -0.59
CHFR-220ENST00000541817 MYH6P13533 1939 aa11.34□□□□□ -0.59
CHFR-220ENST00000541817 C2orf71A6NGG8 1288 aa11.33□□□□□ -0.6
CHFR-220ENST00000541817 SARSP49591 514 aaKnown RBP11.33□□□□□ -0.6
CHFR-220ENST00000541817 MRPS6P82932 125 aaKnown RBP11.33□□□□□ -0.6
CHFR-220ENST00000541817 PGM5Q15124 567 aa11.33□□□□□ -0.6
CHFR-220ENST00000541817 RSPH3Q86UC2 560 aa11.33□□□□□ -0.6
CHFR-220ENST00000541817 MCF2L2Q86YR7 1114 aa11.33□□□□□ -0.6
CHFR-220ENST00000541817 FTSJ3Q8IY81 847 aaKnown RBP11.33□□□□□ -0.6
CHFR-220ENST00000541817 KBTBD3Q8NAB2 608 aa11.33□□□□□ -0.6
CHFR-220ENST00000541817 ACSF2Q96CM8 615 aaPredicted RBP11.33□□□□□ -0.6
CHFR-220ENST00000541817 IPO9Q96P70 1041 aaKnown RBP11.33□□□□□ -0.6
CHFR-220ENST00000541817 NGRNQ9NPE2 291 aaKnown RBP11.33□□□□□ -0.6
CHFR-220ENST00000541817 ZBTB47Q9UFB7 747 aaPredicted RBP11.33□□□□□ -0.6
CHFR-220ENST00000541817 PUF60Q9UHX1 559 aaKnown RBP11.33□□□□□ -0.6
CHFR-220ENST00000541817 PNMA2Q9UL42 364 aa11.33□□□□□ -0.6
CHFR-220ENST00000541817 USTQ9Y2C2 406 aa11.33□□□□□ -0.6
CHFR-220ENST00000541817 OPLAHO14841 1288 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 PLCB3Q01970 1234 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 SPEM2Q0P670 501 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 NFX1Q12986 1120 aaKnown RBP11.32□□□□□ -0.6
CHFR-220ENST00000541817 PPFIA1Q13136 1202 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 PAK2Q13177 524 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 AAMPQ13685 434 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 GRIK4Q16099 956 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 LPAL2Q16609 132 aa11.32□□□□□ -0.6
CHFR-220ENST00000541817 QRICH1Q2TAL8 776 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms