RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 CA8P35219 290 aa11.03□□□□□ -0.64
YBX3-211ENST00000541351 NEDD9Q14511 834 aa11.03□□□□□ -0.64
YBX3-211ENST00000541351 GNPTABQ3T906 1256 aa11.03□□□□□ -0.64
YBX3-211ENST00000541351 GPATCH4Q5T3I0 446 aaKnown RBP11.03□□□□□ -0.64
YBX3-211ENST00000541351 CABP7Q86V35 215 aa11.03□□□□□ -0.64
YBX3-211ENST00000541351 PPFIBP1Q86W92 1011 aa11.03□□□□□ -0.64
YBX3-211ENST00000541351 MRPL43Q8N983 215 aaKnown RBP11.03□□□□□ -0.64
YBX3-211ENST00000541351 LMBR1Q8WVP7 490 aa11.03□□□□□ -0.64
YBX3-211ENST00000541351 NAPBQ9H115 298 aa11.03□□□□□ -0.64
YBX3-211ENST00000541351 SFXN1Q9H9B4 322 aa11.03□□□□□ -0.64
YBX3-211ENST00000541351 IL1RAPL2Q9NP60 686 aa11.03□□□□□ -0.64
YBX3-211ENST00000541351 GPCPD1Q9NPB8 672 aa11.03□□□□□ -0.64
YBX3-211ENST00000541351 SPATA6Q9NWH7 488 aaPredicted RBP11.03□□□□□ -0.64
YBX3-211ENST00000541351 MAP3K20Q9NYL2 800 aaKnown RBP11.03□□□□□ -0.64
YBX3-211ENST00000541351 CA14Q9ULX7 337 aa11.03□□□□□ -0.64
YBX3-211ENST00000541351 EXOC6BQ9Y2D4 811 aa11.03□□□□□ -0.64
YBX3-211ENST00000541351 CDY2AQ9Y6F7 541 aa11.03□□□□□ -0.64
YBX3-211ENST00000541351 KIAA1217Q5T5P2 1943 aa11.03□□□□□ -0.64
YBX3-211ENST00000541351 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.02□□□□□ -0.65
YBX3-211ENST00000541351 KRBA1A5PL33 1030 aa11.02□□□□□ -0.65
YBX3-211ENST00000541351 HIDE1A8MVS5 230 aa11.02□□□□□ -0.65
YBX3-211ENST00000541351 PATL2C9JE40 543 aaKnown RBP11.02□□□□□ -0.65
YBX3-211ENST00000541351 ZFYP08048 801 aaPredicted RBP11.02□□□□□ -0.65
YBX3-211ENST00000541351 UBA1P22314 1058 aaKnown RBP11.02□□□□□ -0.65
YBX3-211ENST00000541351 CD52P31358 61 aa11.02□□□□□ -0.65
YBX3-211ENST00000541351 ADAM17P78536 824 aa11.02□□□□□ -0.65
YBX3-211ENST00000541351 MGAT3Q09327 533 aa11.02□□□□□ -0.65
YBX3-211ENST00000541351 APOBRQ0VD83 1088 aa11.02□□□□□ -0.65
YBX3-211ENST00000541351 PPP2R5DQ14738 602 aa11.02□□□□□ -0.65
YBX3-211ENST00000541351 SLFNL1Q499Z3 407 aa11.02□□□□□ -0.65
YBX3-211ENST00000541351 TTBK2Q6IQ55 1244 aa11.02□□□□□ -0.65
YBX3-211ENST00000541351 ZBTB44Q8NCP5 570 aa11.02□□□□□ -0.65
YBX3-211ENST00000541351 PJA1Q8NG27 643 aa11.02□□□□□ -0.65
YBX3-211ENST00000541351 APPBP2Q92624 585 aa11.02□□□□□ -0.65
YBX3-211ENST00000541351 ZNF558Q96NG5 402 aa11.02□□□□□ -0.65
YBX3-211ENST00000541351 PXMP2Q9NR77 195 aa11.02□□□□□ -0.65
YBX3-211ENST00000541351 DLGAP2Q9P1A6 1054 aa11.02□□□□□ -0.65
YBX3-211ENST00000541351 TUBE1Q9UJT0 475 aa11.02□□□□□ -0.65
YBX3-211ENST00000541351 ZMIZ1Q9ULJ6 1067 aa11.02□□□□□ -0.65
YBX3-211ENST00000541351 PLXNA4Q9HCM2 1894 aa11.02□□□□□ -0.65
YBX3-211ENST00000541351 KIAA1671Q9BY89 1806 aa11.01□□□□□ -0.65
YBX3-211ENST00000541351 DENND3A2RUS2 1198 aa11.01□□□□□ -0.65
YBX3-211ENST00000541351 NCAM2O15394 837 aa11.01□□□□□ -0.65
YBX3-211ENST00000541351 MYCLP12524 364 aaPredicted RBP11.01□□□□□ -0.65
YBX3-211ENST00000541351 NRLP54845 237 aa11.01□□□□□ -0.65
YBX3-211ENST00000541351 MRPS6P82932 125 aaKnown RBP11.01□□□□□ -0.65
YBX3-211ENST00000541351 CSTF1Q05048 431 aaKnown RBP11.01□□□□□ -0.65
YBX3-211ENST00000541351 PPARAQ07869 468 aa11.01□□□□□ -0.65
YBX3-211ENST00000541351 LAIR1Q6GTX8 287 aa11.01□□□□□ -0.65
YBX3-211ENST00000541351 DCLRE1AQ6PJP8 1040 aa11.01□□□□□ -0.65
YBX3-211ENST00000541351 METTL7BQ6UX53 244 aa11.01□□□□□ -0.65
YBX3-211ENST00000541351 IFNL3Q8IZI9 196 aa11.01□□□□□ -0.65
YBX3-211ENST00000541351 SAMD3Q8N6K7 520 aa11.01□□□□□ -0.65
YBX3-211ENST00000541351 FRAT1Q92837 279 aaPredicted RBP11.01□□□□□ -0.65
YBX3-211ENST00000541351 TYW1Q9NV66 732 aaKnown RBP11.01□□□□□ -0.65
YBX3-211ENST00000541351 SPG21Q9NZD8 308 aa11.01□□□□□ -0.65
YBX3-211ENST00000541351 DPP7Q9UHL4 492 aa11.01□□□□□ -0.65
YBX3-211ENST00000541351 CDH22Q9UJ99 828 aa11.01□□□□□ -0.65
YBX3-211ENST00000541351 PADI3Q9ULW8 664 aa11.01□□□□□ -0.65
YBX3-211ENST00000541351 FRMPD2Q68DX3 1309 aaPredicted RBP11.01□□□□□ -0.65
YBX3-211ENST00000541351 ZNF316A6NFI3 1004 aaPredicted RBP11□□□□□ -0.65
YBX3-211ENST00000541351 C2orf71A6NGG8 1288 aa11□□□□□ -0.65
YBX3-211ENST00000541351 GPAA1O43292 621 aa11□□□□□ -0.65
YBX3-211ENST00000541351 ANP32CO43423 234 aa11□□□□□ -0.65
YBX3-211ENST00000541351 RANBP6O60518 1105 aaKnown RBP11□□□□□ -0.65
YBX3-211ENST00000541351 CLASP2O75122 1294 aaKnown RBP11□□□□□ -0.65
YBX3-211ENST00000541351 STAM2O75886 525 aa11□□□□□ -0.65
YBX3-211ENST00000541351 WEE2P0C1S8 567 aa11□□□□□ -0.65
YBX3-211ENST00000541351 CCND2P30279 289 aa11□□□□□ -0.65
YBX3-211ENST00000541351 PPFIA1Q13136 1202 aa11□□□□□ -0.65
YBX3-211ENST00000541351 PTPN14Q15678 1187 aa11□□□□□ -0.65
YBX3-211ENST00000541351 LETM2Q2VYF4 491 aa11□□□□□ -0.65
YBX3-211ENST00000541351 LRSAM1Q6UWE0 723 aa11□□□□□ -0.65
YBX3-211ENST00000541351 UNQ6494/PRO21346Q6UXR6 183 aa11□□□□□ -0.65
YBX3-211ENST00000541351 CYP26C1Q6V0L0 522 aa11□□□□□ -0.65
YBX3-211ENST00000541351 C15orf39Q6ZRI6 1047 aa11□□□□□ -0.65
YBX3-211ENST00000541351 SLC24A5Q71RS6 500 aa11□□□□□ -0.65
YBX3-211ENST00000541351 GPR149Q86SP6 731 aa11□□□□□ -0.65
YBX3-211ENST00000541351 ABI1Q8IZP0 508 aa11□□□□□ -0.65
YBX3-211ENST00000541351 LRRC43Q8N309 656 aa11□□□□□ -0.65
YBX3-211ENST00000541351 KDF1Q8NAX2 398 aaPredicted RBP11□□□□□ -0.65
YBX3-211ENST00000541351 LINC01599Q8WXQ3 324 aa11□□□□□ -0.65
YBX3-211ENST00000541351 OSBPL6Q9BZF3 934 aa11□□□□□ -0.65
YBX3-211ENST00000541351 ATP6V0A4Q9HBG4 840 aa11□□□□□ -0.65
YBX3-211ENST00000541351 FLNBO75369 2602 aaKnown RBP10.99□□□□□ -0.65
YBX3-211ENST00000541351 RRN3P2A6NIE6 340 aa10.99□□□□□ -0.65
YBX3-211ENST00000541351 SORBS3O60504 671 aa10.99□□□□□ -0.65
YBX3-211ENST00000541351 LILRB5O75023 590 aa10.99□□□□□ -0.65
YBX3-211ENST00000541351 RETP07949 1114 aa10.99□□□□□ -0.65
YBX3-211ENST00000541351 PDHBP11177 359 aa10.99□□□□□ -0.65
YBX3-211ENST00000541351 IBSPP21815 317 aaPredicted RBP10.99□□□□□ -0.65
YBX3-211ENST00000541351 GBP2P32456 591 aaPredicted RBP10.99□□□□□ -0.65
YBX3-211ENST00000541351 ZNF543Q08ER8 600 aa10.99□□□□□ -0.65
YBX3-211ENST00000541351 TRAF1Q13077 416 aa10.99□□□□□ -0.65
YBX3-211ENST00000541351 KCNT2Q6UVM3 1135 aa10.99□□□□□ -0.65
YBX3-211ENST00000541351 FTSJ3Q8IY81 847 aaKnown RBP10.99□□□□□ -0.65
YBX3-211ENST00000541351 GIMAP8Q8ND71 665 aaPredicted RBP10.99□□□□□ -0.65
YBX3-211ENST00000541351 DNAJB3Q8WWF6 145 aa10.99□□□□□ -0.65
YBX3-211ENST00000541351 KIF12Q96FN5 646 aa10.99□□□□□ -0.65
YBX3-211ENST00000541351 PDCD2LQ9BRP1 358 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms