RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.34□□□□□ -1.39
RAP1B-224ENST00000541216 DDX53Q86TM3 631 aaKnown RBP6.34□□□□□ -1.39
RAP1B-224ENST00000541216 PROSER1Q86XN7 944 aa6.34□□□□□ -1.39
RAP1B-224ENST00000541216 NOSTRINQ8IVI9 506 aa6.34□□□□□ -1.39
RAP1B-224ENST00000541216 TARS2Q9BW92 718 aaKnown RBP6.34□□□□□ -1.39
RAP1B-224ENST00000541216 SSBP3Q9BWW4 388 aaPredicted RBP6.34□□□□□ -1.39
RAP1B-224ENST00000541216 DTLQ9NZJ0 730 aa6.34□□□□□ -1.39
RAP1B-224ENST00000541216 WASF3Q9UPY6 502 aa6.34□□□□□ -1.39
RAP1B-224ENST00000541216 GSG1L2A8MUP6 293 aa6.33□□□□□ -1.4
RAP1B-224ENST00000541216 M0R2C6 588 aa6.33□□□□□ -1.4
RAP1B-224ENST00000541216 CBX4O00257 560 aa6.33□□□□□ -1.4
RAP1B-224ENST00000541216 KCNK3O14649 394 aa6.33□□□□□ -1.4
RAP1B-224ENST00000541216 THBS2P35442 1172 aa6.33□□□□□ -1.4
RAP1B-224ENST00000541216 GRIN1Q05586 938 aa6.33□□□□□ -1.4
RAP1B-224ENST00000541216 SMARCC2Q8TAQ2 1214 aa6.33□□□□□ -1.4
RAP1B-224ENST00000541216 TOE1Q96GM8 510 aaKnown RBP6.33□□□□□ -1.4
RAP1B-224ENST00000541216 NOX5Q96PH1 765 aa6.33□□□□□ -1.4
RAP1B-224ENST00000541216 ZBTB48P10074 688 aaPredicted RBP6.32□□□□□ -1.4
RAP1B-224ENST00000541216 FAHP16930 419 aa6.32□□□□□ -1.4
RAP1B-224ENST00000541216 INHBEP58166 350 aa6.32□□□□□ -1.4
RAP1B-224ENST00000541216 PAN2Q504Q3 1202 aaKnown RBP6.32□□□□□ -1.4
RAP1B-224ENST00000541216 PIK3R6Q5UE93 754 aa6.32□□□□□ -1.4
RAP1B-224ENST00000541216 BORAQ6PGQ7 559 aa6.32□□□□□ -1.4
RAP1B-224ENST00000541216 FAM124AQ86V42 546 aa6.32□□□□□ -1.4
RAP1B-224ENST00000541216 NLGN4XQ8N0W4 816 aa6.32□□□□□ -1.4
RAP1B-224ENST00000541216 LINC00482Q8N8I6 264 aa6.32□□□□□ -1.4
RAP1B-224ENST00000541216 GORASP1Q9BQQ3 440 aa6.32□□□□□ -1.4
RAP1B-224ENST00000541216 NUB1Q9Y5A7 615 aa6.32□□□□□ -1.4
RAP1B-224ENST00000541216 LOC105371045A0A1W2PR82 267 aa6.31□□□□□ -1.4
RAP1B-224ENST00000541216 CLASP2O75122 1294 aaKnown RBP6.31□□□□□ -1.4
RAP1B-224ENST00000541216 C4BPAP04003 597 aaKnown RBP6.31□□□□□ -1.4
RAP1B-224ENST00000541216 APPP05067 770 aa6.31□□□□□ -1.4
RAP1B-224ENST00000541216 CYP2C8P10632 490 aa6.31□□□□□ -1.4
RAP1B-224ENST00000541216 PTPN1P18031 435 aaKnown RBP6.31□□□□□ -1.4
RAP1B-224ENST00000541216 MASP1P48740 699 aa6.31□□□□□ -1.4
RAP1B-224ENST00000541216 PCBP1Q15365 356 aaKnown RBP eCLIP6.31□□□□□ -1.4
RAP1B-224ENST00000541216 CFAP100Q494V2 611 aa6.31□□□□□ -1.4
RAP1B-224ENST00000541216 CREB3L3Q68CJ9 461 aa6.31□□□□□ -1.4
RAP1B-224ENST00000541216 CD300LDQ6UXZ3 194 aa6.31□□□□□ -1.4
RAP1B-224ENST00000541216 UBE2R2Q712K3 238 aaPredicted RBP6.31□□□□□ -1.4
RAP1B-224ENST00000541216 THNSL2Q86YJ6 484 aa6.31□□□□□ -1.4
RAP1B-224ENST00000541216 CHST14Q8NCH0 376 aa6.31□□□□□ -1.4
RAP1B-224ENST00000541216 ADAMTS17Q8TE56 1095 aa6.31□□□□□ -1.4
RAP1B-224ENST00000541216 DLG3Q92796 817 aa6.31□□□□□ -1.4
RAP1B-224ENST00000541216 DDX11Q96FC9 970 aa6.31□□□□□ -1.4
RAP1B-224ENST00000541216 KLC2Q9H0B6 622 aa6.31□□□□□ -1.4
RAP1B-224ENST00000541216 RBPJLQ9UBG7 517 aa6.31□□□□□ -1.4
RAP1B-224ENST00000541216 ING1Q9UK53 422 aaPredicted RBP6.31□□□□□ -1.4
RAP1B-224ENST00000541216 INVSQ9Y283 1065 aa6.31□□□□□ -1.4
RAP1B-224ENST00000541216 B3GALT1Q9Y5Z6 326 aa6.31□□□□□ -1.4
RAP1B-224ENST00000541216 ATP23Q9Y6H3 246 aa6.31□□□□□ -1.4
RAP1B-224ENST00000541216 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.3□□□□□ -1.4
RAP1B-224ENST00000541216 PDE8AO60658 829 aa6.3□□□□□ -1.4
RAP1B-224ENST00000541216 MYCLP1P12525 358 aaPredicted RBP6.3□□□□□ -1.4
RAP1B-224ENST00000541216 FLT3P36888 993 aa6.3□□□□□ -1.4
RAP1B-224ENST00000541216 ITGA1P56199 1179 aa6.3□□□□□ -1.4
RAP1B-224ENST00000541216 SEPT7Q16181 437 aaKnown RBP6.3□□□□□ -1.4
RAP1B-224ENST00000541216 CNNM4Q6P4Q7 775 aa6.3□□□□□ -1.4
RAP1B-224ENST00000541216 ZC3H18Q86VM9 953 aaKnown RBP6.3□□□□□ -1.4
RAP1B-224ENST00000541216 KIF18BQ86Y91 864 aa6.3□□□□□ -1.4
RAP1B-224ENST00000541216 WNK4Q96J92 1243 aa6.3□□□□□ -1.4
RAP1B-224ENST00000541216 NGRNQ9NPE2 291 aaKnown RBP6.3□□□□□ -1.4
RAP1B-224ENST00000541216 B4GALT6Q9UBX8 382 aa6.3□□□□□ -1.4
RAP1B-224ENST00000541216 SLC12A8A0AV02 714 aa6.29□□□□□ -1.4
RAP1B-224ENST00000541216 DVL2O14641 736 aa6.29□□□□□ -1.4
RAP1B-224ENST00000541216 KPNA6O60684 536 aa6.29□□□□□ -1.4
RAP1B-224ENST00000541216 VIL1P09327 827 aaKnown RBP6.29□□□□□ -1.4
RAP1B-224ENST00000541216 GJA4P35212 333 aa6.29□□□□□ -1.4
RAP1B-224ENST00000541216 NKX3-2P78367 333 aa6.29□□□□□ -1.4
RAP1B-224ENST00000541216 ADAM9Q13443 819 aa6.29□□□□□ -1.4
RAP1B-224ENST00000541216 ARHGAP44Q17R89 818 aa6.29□□□□□ -1.4
RAP1B-224ENST00000541216 BTBD8Q5XKL5 378 aa6.29□□□□□ -1.4
RAP1B-224ENST00000541216 PKN3Q6P5Z2 889 aa6.29□□□□□ -1.4
RAP1B-224ENST00000541216 ZNF662Q6ZS27 426 aa6.29□□□□□ -1.4
RAP1B-224ENST00000541216 LIMS2Q7Z4I7 341 aa6.29□□□□□ -1.4
RAP1B-224ENST00000541216 RNF180Q86T96 592 aa6.29□□□□□ -1.4
RAP1B-224ENST00000541216 PPM1KQ8N3J5 372 aa6.29□□□□□ -1.4
RAP1B-224ENST00000541216 C2orf69Q8N8R5 385 aa6.29□□□□□ -1.4
RAP1B-224ENST00000541216 YIPF4Q9BSR8 244 aa6.29□□□□□ -1.4
RAP1B-224ENST00000541216 C11orf84Q9BUA3 381 aaPredicted RBP6.29□□□□□ -1.4
RAP1B-224ENST00000541216 BOCQ9BWV1 1114 aa6.29□□□□□ -1.4
RAP1B-224ENST00000541216 SPATA6Q9NWH7 488 aaPredicted RBP6.29□□□□□ -1.4
RAP1B-224ENST00000541216 MAPRE3Q9UPY8 281 aa6.29□□□□□ -1.4
RAP1B-224ENST00000541216 PTPDC1A2A3K4 754 aa6.28□□□□□ -1.4
RAP1B-224ENST00000541216 F2P00734 622 aa6.28□□□□□ -1.4
RAP1B-224ENST00000541216 NEK4P51957 841 aa6.28□□□□□ -1.4
RAP1B-224ENST00000541216 DSG1Q02413 1049 aa6.28□□□□□ -1.4
RAP1B-224ENST00000541216 FHL2Q14192 279 aa6.28□□□□□ -1.4
RAP1B-224ENST00000541216 RGL3Q3MIN7 710 aa6.28□□□□□ -1.4
RAP1B-224ENST00000541216 CD276Q5ZPR3 534 aa6.28□□□□□ -1.4
RAP1B-224ENST00000541216 SLKQ9H2G2 1235 aaPredicted RBP6.28□□□□□ -1.4
RAP1B-224ENST00000541216 PCDH18Q9HCL0 1135 aa6.28□□□□□ -1.4
RAP1B-224ENST00000541216 RIC8BQ9NVN3 520 aa6.28□□□□□ -1.4
RAP1B-224ENST00000541216 SBNO2Q9Y2G9 1366 aa6.28□□□□□ -1.4
RAP1B-224ENST00000541216 WDR33Q9C0J8 1336 aaKnown RBP6.27□□□□□ -1.41
RAP1B-224ENST00000541216 RASSF10A6NK89 507 aa6.27□□□□□ -1.41
RAP1B-224ENST00000541216 ZNF891A8MT65 544 aaPredicted RBP6.27□□□□□ -1.41
RAP1B-224ENST00000541216 SCDO00767 359 aa6.27□□□□□ -1.41
RAP1B-224ENST00000541216 STAT3P40763 770 aa6.27□□□□□ -1.41
RAP1B-224ENST00000541216 IRF9Q00978 393 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms