RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 JAK3P52333 1124 aa19.07■□□□□ 0.64
CD9-209ENST00000540891 SMAD3P84022 425 aaKnown RBP19.07■□□□□ 0.64
CD9-209ENST00000540891 UGCGQ16739 394 aa19.07■□□□□ 0.64
CD9-209ENST00000540891 GPR153Q6NV75 609 aa19.07■□□□□ 0.64
CD9-209ENST00000540891 TAF2Q6P1X5 1199 aa19.07■□□□□ 0.64
CD9-209ENST00000540891 RPAINQ86UA6 219 aa19.07■□□□□ 0.64
CD9-209ENST00000540891 FAM20AQ96MK3 541 aa19.07■□□□□ 0.64
CD9-209ENST00000540891 NAP1L4Q99733 375 aaKnown RBP19.07■□□□□ 0.64
CD9-209ENST00000540891 GRXCR1A8MXD5 290 aa19.06■□□□□ 0.64
CD9-209ENST00000540891 TBX3O15119 743 aa19.06■□□□□ 0.64
CD9-209ENST00000540891 CTSHP09668 335 aa19.06■□□□□ 0.64
CD9-209ENST00000540891 SAFBQ15424 915 aaKnown RBP eCLIP19.06■□□□□ 0.64
CD9-209ENST00000540891 FAM26DQ5JW98 314 aa19.06■□□□□ 0.64
CD9-209ENST00000540891 FTOQ9C0B1 505 aaKnown RBP eCLIP19.06■□□□□ 0.64
CD9-209ENST00000540891 FOXP1Q9H334 677 aaPredicted RBP19.06■□□□□ 0.64
CD9-209ENST00000540891 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.05■□□□□ 0.64
CD9-209ENST00000540891 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.05■□□□□ 0.64
CD9-209ENST00000540891 KIF28PB7ZC32 967 aa19.05■□□□□ 0.64
CD9-209ENST00000540891 EML1O00423 815 aa19.05■□□□□ 0.64
CD9-209ENST00000540891 MGAT3Q09327 533 aa19.05■□□□□ 0.64
CD9-209ENST00000540891 PPP2R5CQ13362 524 aa19.05■□□□□ 0.64
CD9-209ENST00000540891 MIER3Q7Z3K6 550 aa19.05■□□□□ 0.64
CD9-209ENST00000540891 RDM1Q8NG50 284 aa19.05■□□□□ 0.64
CD9-209ENST00000540891 DNAJB3Q8WWF6 145 aa19.05■□□□□ 0.64
CD9-209ENST00000540891 BBXQ8WY36 941 aaPredicted RBP19.05■□□□□ 0.64
CD9-209ENST00000540891 TNPO1Q92973 898 aaKnown RBP19.05■□□□□ 0.64
CD9-209ENST00000540891 PCDHA2Q9Y5H9 948 aa19.05■□□□□ 0.64
CD9-209ENST00000540891 KAT6AQ92794 2004 aa19.05■□□□□ 0.64
CD9-209ENST00000540891 COL1A2P08123 1366 aa19.05■□□□□ 0.64
CD9-209ENST00000540891 WDR81Q562E7 1941 aa19.04■□□□□ 0.64
CD9-209ENST00000540891 CHRNA1P02708 482 aa19.04■□□□□ 0.64
CD9-209ENST00000540891 SPIRE1Q08AE8 756 aa19.04■□□□□ 0.64
CD9-209ENST00000540891 ZNF484Q5JVG2 852 aa19.04■□□□□ 0.64
CD9-209ENST00000540891 MTHFD1LQ6UB35 978 aa19.04■□□□□ 0.64
CD9-209ENST00000540891 Q7L0L9 218 aa19.04■□□□□ 0.64
CD9-209ENST00000540891 CKAP2LQ8IYA6 745 aa19.04■□□□□ 0.64
CD9-209ENST00000540891 MTIF3Q9H2K0 278 aaKnown RBP19.04■□□□□ 0.64
CD9-209ENST00000540891 ZBBXA8MT70 800 aa19.03■□□□□ 0.64
CD9-209ENST00000540891 STBD1O95210 358 aa19.03■□□□□ 0.64
CD9-209ENST00000540891 OATP04181 439 aa19.03■□□□□ 0.64
CD9-209ENST00000540891 ACTN1P12814 892 aa19.03■□□□□ 0.64
CD9-209ENST00000540891 KLRC1P26715 233 aa19.03■□□□□ 0.64
CD9-209ENST00000540891 GJB2P29033 226 aa19.03■□□□□ 0.64
CD9-209ENST00000540891 PBX2P40425 430 aa19.03■□□□□ 0.64
CD9-209ENST00000540891 PRKCEQ02156 737 aa19.03■□□□□ 0.64
CD9-209ENST00000540891 CNKSR3Q6P9H4 555 aa19.03■□□□□ 0.64
CD9-209ENST00000540891 TRMT1LQ7Z2T5 733 aaKnown RBP19.03■□□□□ 0.64
CD9-209ENST00000540891 FAM49AQ9H0Q0 323 aaPredicted RBP19.03■□□□□ 0.64
CD9-209ENST00000540891 SLC4A7Q9Y6M7 1214 aa19.03■□□□□ 0.64
CD9-209ENST00000540891 SIP14410 1827 aa19.02■□□□□ 0.64
CD9-209ENST00000540891 SMIM35A0A1B0GVV1 85 aa19.02■□□□□ 0.64
CD9-209ENST00000540891 BAIAP3O94812 1187 aa19.02■□□□□ 0.64
CD9-209ENST00000540891 C22orf31O95567 290 aa19.02■□□□□ 0.64
CD9-209ENST00000540891 U2AF2P26368 475 aaKnown RBP eCLIP19.02■□□□□ 0.64
CD9-209ENST00000540891 MKRN4PQ13434 485 aaPredicted RBP19.02■□□□□ 0.64
CD9-209ENST00000540891 CUL4AQ13619 759 aa19.02■□□□□ 0.64
CD9-209ENST00000540891 PLEKHG4Q58EX7 1191 aa19.02■□□□□ 0.64
CD9-209ENST00000540891 NOSTRINQ8IVI9 506 aa19.02■□□□□ 0.64
CD9-209ENST00000540891 DBF4BQ8NFT6 615 aa19.02■□□□□ 0.64
CD9-209ENST00000540891 FAM167AQ96KS9 214 aa19.02■□□□□ 0.64
CD9-209ENST00000540891 MTMR9Q96QG7 549 aa19.02■□□□□ 0.64
CD9-209ENST00000540891 PBX4Q9BYU1 374 aa19.02■□□□□ 0.64
CD9-209ENST00000540891 TMEM60Q9H2L4 133 aa19.02■□□□□ 0.64
CD9-209ENST00000540891 MYH9P35579 1960 aaKnown RBP19.01■□□□□ 0.63
CD9-209ENST00000540891 NEMFO60524 1076 aa19.01■□□□□ 0.63
CD9-209ENST00000540891 ATP2B1P20020 1258 aa19.01■□□□□ 0.63
CD9-209ENST00000540891 DNAJB2P25686 324 aa19.01■□□□□ 0.63
CD9-209ENST00000540891 MRPS6P82932 125 aaKnown RBP19.01■□□□□ 0.63
CD9-209ENST00000540891 CALCRLQ16602 461 aa19.01■□□□□ 0.63
CD9-209ENST00000540891 RSPH3Q86UC2 560 aa19.01■□□□□ 0.63
CD9-209ENST00000540891 SLFN12Q8IYM2 578 aa19.01■□□□□ 0.63
CD9-209ENST00000540891 BANK1Q8NDB2 785 aa19.01■□□□□ 0.63
CD9-209ENST00000540891 CDY2AQ9Y6F7 541 aa19.01■□□□□ 0.63
CD9-209ENST00000540891 TMEM150BA6NC51 233 aa19■□□□□ 0.63
CD9-209ENST00000540891 BAG4O95429 457 aaKnown RBP19■□□□□ 0.63
CD9-209ENST00000540891 ATP2A2P16615 1042 aaKnown RBP19■□□□□ 0.63
CD9-209ENST00000540891 MCM7P33993 719 aa19■□□□□ 0.63
CD9-209ENST00000540891 WDR5P61964 334 aaKnown RBP19■□□□□ 0.63
CD9-209ENST00000540891 TMEM62Q0P6H9 643 aa19■□□□□ 0.63
CD9-209ENST00000540891 TARBP2Q15633 366 aaKnown RBP19■□□□□ 0.63
CD9-209ENST00000540891 KIAA0319LQ8IZA0 1049 aa19■□□□□ 0.63
CD9-209ENST00000540891 DEFB123Q8N688 67 aa19■□□□□ 0.63
CD9-209ENST00000540891 CEP89Q96ST8 783 aa19■□□□□ 0.63
CD9-209ENST00000540891 TTYH1Q9H313 450 aaPredicted RBP19■□□□□ 0.63
CD9-209ENST00000540891 WRAP73Q9P2S5 460 aaPredicted RBP19■□□□□ 0.63
CD9-209ENST00000540891 CEP131Q9UPN4 1083 aa19■□□□□ 0.63
CD9-209ENST00000540891 KIF3AQ9Y496 699 aa19■□□□□ 0.63
CD9-209ENST00000540891 ABHD14A-ACY1A0A1B0GW23 586 aa18.99■□□□□ 0.63
CD9-209ENST00000540891 MARCH6O60337 910 aa18.99■□□□□ 0.63
CD9-209ENST00000540891 RPLP2P05387 115 aaKnown RBP18.99■□□□□ 0.63
CD9-209ENST00000540891 GHRP10912 638 aa18.99■□□□□ 0.63
CD9-209ENST00000540891 RABGGTBP53611 331 aa18.99■□□□□ 0.63
CD9-209ENST00000540891 PSMC5P62195 406 aa18.99■□□□□ 0.63
CD9-209ENST00000540891 DEFB103AP81534 67 aa18.99■□□□□ 0.63
CD9-209ENST00000540891 LPIN1Q14693 890 aa18.99■□□□□ 0.63
CD9-209ENST00000540891 EPHA7Q15375 998 aa18.99■□□□□ 0.63
CD9-209ENST00000540891 ZNF174Q15697 407 aa18.99■□□□□ 0.63
CD9-209ENST00000540891 XKR3Q5GH77 459 aa18.99■□□□□ 0.63
CD9-209ENST00000540891 NCAPH2Q6IBW4 605 aa18.99■□□□□ 0.63
CD9-209ENST00000540891 LINC01465Q8N7H1 131 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms