RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 PLCB3Q01970 1234 aa9.53□□□□□ -0.88
KLHL42-203ENST00000540301 ZKSCAN2Q63HK3 967 aa9.53□□□□□ -0.88
KLHL42-203ENST00000540301 XRRA1Q6P2D8 792 aa9.53□□□□□ -0.88
KLHL42-203ENST00000540301 OTOP3Q7RTS5 596 aa9.53□□□□□ -0.88
KLHL42-203ENST00000540301 C12orf76Q8N812 135 aaPredicted RBP9.53□□□□□ -0.88
KLHL42-203ENST00000540301 TMEM47Q9BQJ4 181 aa9.53□□□□□ -0.88
KLHL42-203ENST00000540301 NAPBQ9H115 298 aa9.53□□□□□ -0.88
KLHL42-203ENST00000540301 TBC1D17Q9HA65 648 aa9.53□□□□□ -0.88
KLHL42-203ENST00000540301 TYW1Q9NV66 732 aaKnown RBP9.53□□□□□ -0.88
KLHL42-203ENST00000540301 DLGAP2Q9P1A6 1054 aa9.53□□□□□ -0.88
KLHL42-203ENST00000540301 ANGPTL2Q9UKU9 493 aa9.53□□□□□ -0.88
KLHL42-203ENST00000540301 ZNF215Q9UL58 517 aaPredicted RBP9.53□□□□□ -0.88
KLHL42-203ENST00000540301 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.53□□□□□ -0.88
KLHL42-203ENST00000540301 SIT1Q9Y3P8 196 aa9.53□□□□□ -0.88
KLHL42-203ENST00000540301 PCDHB7Q9Y5E2 793 aa9.53□□□□□ -0.88
KLHL42-203ENST00000540301 CACNA1IQ9P0X4 2223 aa9.53□□□□□ -0.88
KLHL42-203ENST00000540301 M0R2C6 588 aa9.52□□□□□ -0.89
KLHL42-203ENST00000540301 SPTLC1O15269 473 aa9.52□□□□□ -0.89
KLHL42-203ENST00000540301 RNF113AO15541 343 aaKnown RBP9.52□□□□□ -0.89
KLHL42-203ENST00000540301 CLASP2O75122 1294 aaKnown RBP9.52□□□□□ -0.89
KLHL42-203ENST00000540301 LAG3P18627 525 aa9.52□□□□□ -0.89
KLHL42-203ENST00000540301 FXR2P51116 673 aaKnown RBP eCLIP9.52□□□□□ -0.89
KLHL42-203ENST00000540301 ZNF543Q08ER8 600 aa9.52□□□□□ -0.89
KLHL42-203ENST00000540301 KANK3Q6NY19 840 aa9.52□□□□□ -0.89
KLHL42-203ENST00000540301 TMC7Q7Z402 723 aa9.52□□□□□ -0.89
KLHL42-203ENST00000540301 TRIM50Q86XT4 487 aa9.52□□□□□ -0.89
KLHL42-203ENST00000540301 ITPRIPQ8IWB1 547 aa9.52□□□□□ -0.89
KLHL42-203ENST00000540301 DNAJB3Q8WWF6 145 aa9.52□□□□□ -0.89
KLHL42-203ENST00000540301 GPKOWQ92917 476 aaPredicted RBP eCLIP9.52□□□□□ -0.89
KLHL42-203ENST00000540301 GPR20Q99678 358 aa9.52□□□□□ -0.89
KLHL42-203ENST00000540301 BCAS3Q9H6U6 928 aa9.52□□□□□ -0.89
KLHL42-203ENST00000540301 IGSF9Q9P2J2 1179 aa9.52□□□□□ -0.89
KLHL42-203ENST00000540301 HCSTQ9UBK5 93 aa9.52□□□□□ -0.89
KLHL42-203ENST00000540301 CA14Q9ULX7 337 aa9.52□□□□□ -0.89
KLHL42-203ENST00000540301 SQORQ9Y6N5 450 aa9.52□□□□□ -0.89
KLHL42-203ENST00000540301 FNDC1Q4ZHG4 1894 aaPredicted RBP9.51□□□□□ -0.89
KLHL42-203ENST00000540301 ZNF316A6NFI3 1004 aaPredicted RBP9.51□□□□□ -0.89
KLHL42-203ENST00000540301 C2orf71A6NGG8 1288 aa9.51□□□□□ -0.89
KLHL42-203ENST00000540301 POTEMA6NI47 508 aa9.51□□□□□ -0.89
KLHL42-203ENST00000540301 TGM1P22735 817 aa9.51□□□□□ -0.89
KLHL42-203ENST00000540301 SARSP49591 514 aaKnown RBP9.51□□□□□ -0.89
KLHL42-203ENST00000540301 MRPS6P82932 125 aaKnown RBP9.51□□□□□ -0.89
KLHL42-203ENST00000540301 KRT17Q04695 432 aa9.51□□□□□ -0.89
KLHL42-203ENST00000540301 CTDSPL2Q05D32 466 aa9.51□□□□□ -0.89
KLHL42-203ENST00000540301 SMC1AQ14683 1233 aaKnown RBP9.51□□□□□ -0.89
KLHL42-203ENST00000540301 CDC37Q16543 378 aaPredicted RBP9.51□□□□□ -0.89
KLHL42-203ENST00000540301 FAM102BQ5T8I3 360 aa9.51□□□□□ -0.89
KLHL42-203ENST00000540301 UTP14CQ5TAP6 766 aaKnown RBP9.51□□□□□ -0.89
KLHL42-203ENST00000540301 POTEGQ6S5H5 508 aa9.51□□□□□ -0.89
KLHL42-203ENST00000540301 CCDC149Q6ZUS6 474 aa9.51□□□□□ -0.89
KLHL42-203ENST00000540301 VSIG10LQ86VR7 867 aa9.51□□□□□ -0.89
KLHL42-203ENST00000540301 MAML2Q8IZL2 1156 aaPredicted RBP9.51□□□□□ -0.89
KLHL42-203ENST00000540301 MRPL43Q8N983 215 aaKnown RBP9.51□□□□□ -0.89
KLHL42-203ENST00000540301 KBTBD3Q8NAB2 608 aa9.51□□□□□ -0.89
KLHL42-203ENST00000540301 ATRIPQ8WXE1 791 aa9.51□□□□□ -0.89
KLHL42-203ENST00000540301 PDCD2LQ9BRP1 358 aa9.51□□□□□ -0.89
KLHL42-203ENST00000540301 CWH43Q9H720 699 aa9.51□□□□□ -0.89
KLHL42-203ENST00000540301 DZANK1Q9NVP4 752 aa9.51□□□□□ -0.89
KLHL42-203ENST00000540301 PADI3Q9ULW8 664 aa9.51□□□□□ -0.89
KLHL42-203ENST00000540301 MRPL11Q9Y3B7 192 aaKnown RBP9.51□□□□□ -0.89
KLHL42-203ENST00000540301 FRYLO94915 3013 aa9.5□□□□□ -0.89
KLHL42-203ENST00000540301 SOBPA7XYQ1 873 aa9.5□□□□□ -0.89
KLHL42-203ENST00000540301 SLC30A4O14863 429 aa9.5□□□□□ -0.89
KLHL42-203ENST00000540301 CFBP00751 764 aa9.5□□□□□ -0.89
KLHL42-203ENST00000540301 GOLGA8HP0CJ92 632 aa9.5□□□□□ -0.89
KLHL42-203ENST00000540301 PAK2Q13177 524 aa9.5□□□□□ -0.89
KLHL42-203ENST00000540301 PGM5Q15124 567 aa9.5□□□□□ -0.89
KLHL42-203ENST00000540301 ZNF528Q3MIS6 628 aa9.5□□□□□ -0.89
KLHL42-203ENST00000540301 IER5Q5VY09 327 aa9.5□□□□□ -0.89
KLHL42-203ENST00000540301 PHLDB3Q6NSJ2 640 aa9.5□□□□□ -0.89
KLHL42-203ENST00000540301 METTL7BQ6UX53 244 aa9.5□□□□□ -0.89
KLHL42-203ENST00000540301 FTSJ3Q8IY81 847 aaKnown RBP9.5□□□□□ -0.89
KLHL42-203ENST00000540301 NETO1Q8TDF5 533 aa9.5□□□□□ -0.89
KLHL42-203ENST00000540301 ZFP91Q96JP5 570 aaPredicted RBP9.5□□□□□ -0.89
KLHL42-203ENST00000540301 UBA5Q9GZZ9 404 aa9.5□□□□□ -0.89
KLHL42-203ENST00000540301 CPVLQ9H3G5 476 aa9.5□□□□□ -0.89
KLHL42-203ENST00000540301 TMX1Q9H3N1 280 aa9.5□□□□□ -0.89
KLHL42-203ENST00000540301 TUBE1Q9UJT0 475 aa9.5□□□□□ -0.89
KLHL42-203ENST00000540301 SMG5Q9UPR3 1016 aaKnown RBP9.5□□□□□ -0.89
KLHL42-203ENST00000540301 PCDHGA2Q9Y5H1 932 aa9.5□□□□□ -0.89
KLHL42-203ENST00000540301 M0QZ92 97 aa9.49□□□□□ -0.89
KLHL42-203ENST00000540301 RAB11FIP3O75154 756 aa9.49□□□□□ -0.89
KLHL42-203ENST00000540301 PROS1P07225 676 aa9.49□□□□□ -0.89
KLHL42-203ENST00000540301 ZFYP08048 801 aaPredicted RBP9.49□□□□□ -0.89
KLHL42-203ENST00000540301 SNHG28P0DPA3 235 aa9.49□□□□□ -0.89
KLHL42-203ENST00000540301 GLULP15104 373 aa9.49□□□□□ -0.89
KLHL42-203ENST00000540301 PDE4AP27815 886 aa9.49□□□□□ -0.89
KLHL42-203ENST00000540301 PMLP29590 882 aa9.49□□□□□ -0.89
KLHL42-203ENST00000540301 CA8P35219 290 aa9.49□□□□□ -0.89
KLHL42-203ENST00000540301 PPFIA1Q13136 1202 aa9.49□□□□□ -0.89
KLHL42-203ENST00000540301 NEDD9Q14511 834 aa9.49□□□□□ -0.89
KLHL42-203ENST00000540301 NONOQ15233 471 aaKnown RBP eCLIP9.49□□□□□ -0.89
KLHL42-203ENST00000540301 GPATCH4Q5T3I0 446 aaKnown RBP9.49□□□□□ -0.89
KLHL42-203ENST00000540301 TMC5Q6UXY8 1006 aa9.49□□□□□ -0.89
KLHL42-203ENST00000540301 CYFIP1Q7L576 1253 aa9.49□□□□□ -0.89
KLHL42-203ENST00000540301 TMEM87AQ8NBN3 555 aa9.49□□□□□ -0.89
KLHL42-203ENST00000540301 FEZF2Q8TBJ5 459 aa9.49□□□□□ -0.89
KLHL42-203ENST00000540301 EPC1Q9H2F5 836 aa9.49□□□□□ -0.89
KLHL42-203ENST00000540301 PARD6AQ9NPB6 346 aa9.49□□□□□ -0.89
KLHL42-203ENST00000540301 GMEB2Q9UKD1 530 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms