RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 ATP8B4Q8TF62 1192 aa17.03■□□□□ 0.32
UBE3B-212ENST00000540230 DNAJB3Q8WWF6 145 aa17.03■□□□□ 0.32
UBE3B-212ENST00000540230 KCNMB3Q9NPA1 279 aa17.03■□□□□ 0.32
UBE3B-212ENST00000540230 DISC1Q9NRI5 854 aa17.03■□□□□ 0.32
UBE3B-212ENST00000540230 CHD7Q9P2D1 2997 aa17.03■□□□□ 0.32
UBE3B-212ENST00000540230 SAMM50Q9Y512 469 aa17.03■□□□□ 0.32
UBE3B-212ENST00000540230 SLC4A7Q9Y6M7 1214 aa17.03■□□□□ 0.32
UBE3B-212ENST00000540230 RRN3P2A6NIE6 340 aa17.02■□□□□ 0.32
UBE3B-212ENST00000540230 WDR64B1ANS9 1081 aa17.02■□□□□ 0.32
UBE3B-212ENST00000540230 ZNF862O60290 1169 aa17.02■□□□□ 0.32
UBE3B-212ENST00000540230 PARNO95453 639 aaKnown RBP17.02■□□□□ 0.32
UBE3B-212ENST00000540230 CHRNA1P02708 482 aa17.02■□□□□ 0.32
UBE3B-212ENST00000540230 PSAPP07602 524 aa17.02■□□□□ 0.32
UBE3B-212ENST00000540230 ACTN1P12814 892 aa17.02■□□□□ 0.32
UBE3B-212ENST00000540230 SLC26A2P50443 739 aa17.02■□□□□ 0.32
UBE3B-212ENST00000540230 MGAT3Q09327 533 aa17.02■□□□□ 0.32
UBE3B-212ENST00000540230 ZNF697Q5TEC3 545 aa17.02■□□□□ 0.32
UBE3B-212ENST00000540230 PPP4R3AQ6IN85 833 aa17.02■□□□□ 0.32
UBE3B-212ENST00000540230 CNKSR3Q6P9H4 555 aa17.02■□□□□ 0.32
UBE3B-212ENST00000540230 TMCO2Q7Z6W1 182 aaPredicted RBP17.02■□□□□ 0.32
UBE3B-212ENST00000540230 POTEDQ86YR6 584 aa17.02■□□□□ 0.32
UBE3B-212ENST00000540230 DBF4BQ8NFT6 615 aa17.02■□□□□ 0.32
UBE3B-212ENST00000540230 GUCD1Q96NT3 240 aa17.02■□□□□ 0.32
UBE3B-212ENST00000540230 BACH2Q9BYV9 841 aa17.02■□□□□ 0.32
UBE3B-212ENST00000540230 BRMS1Q9HCU9 246 aa17.02■□□□□ 0.32
UBE3B-212ENST00000540230 TCEAL9Q9UHQ7 104 aa17.02■□□□□ 0.32
UBE3B-212ENST00000540230 YBX2Q9Y2T7 364 aaKnown RBP17.02■□□□□ 0.32
UBE3B-212ENST00000540230 MICAL3Q7RTP6 2002 aa17.02■□□□□ 0.32
UBE3B-212ENST00000540230 ST18O60284 1047 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 HBP1O60381 514 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 CAND2O75155 1236 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 MYOGP15173 224 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 WDR5P61964 334 aaKnown RBP17.01■□□□□ 0.31
UBE3B-212ENST00000540230 DEFB103AP81534 67 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 TRIM29Q14134 588 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 FAM26DQ5JW98 314 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 TAF2Q6P1X5 1199 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 RPAINQ86UA6 219 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 PIAS4Q8N2W9 510 aaPredicted RBP17.01■□□□□ 0.31
UBE3B-212ENST00000540230 HAS1Q92839 578 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 TMX3Q96JJ7 454 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 C8orf76Q96K31 380 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 FAM49AQ9H0Q0 323 aaPredicted RBP17.01■□□□□ 0.31
UBE3B-212ENST00000540230 SEMA6BQ9H3T3 888 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 EVPLQ92817 2033 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 LOXHD1Q8IVV2 1947 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 GCFC2P16383 781 aaKnown RBP17.01■□□□□ 0.31
UBE3B-212ENST00000540230 ATP2A2P16615 1042 aaKnown RBP17.01■□□□□ 0.31
UBE3B-212ENST00000540230 PLEKHG4Q58EX7 1191 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 MTHFD1LQ6UB35 978 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 CKAP2LQ8IYA6 745 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 TIFAQ96CG3 184 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 VAV3Q9UKW4 847 aa17.01■□□□□ 0.31
UBE3B-212ENST00000540230 EML1O00423 815 aa17■□□□□ 0.31
UBE3B-212ENST00000540230 BAIAP3O94812 1187 aa17■□□□□ 0.31
UBE3B-212ENST00000540230 KLRC1P26715 233 aa17■□□□□ 0.31
UBE3B-212ENST00000540230 JAK3P52333 1124 aa17■□□□□ 0.31
UBE3B-212ENST00000540230 HMGN5P82970 282 aaKnown RBP17■□□□□ 0.31
UBE3B-212ENST00000540230 TMEM62Q0P6H9 643 aa17■□□□□ 0.31
UBE3B-212ENST00000540230 MKRN4PQ13434 485 aaPredicted RBP17■□□□□ 0.31
UBE3B-212ENST00000540230 MIER3Q7Z3K6 550 aa17■□□□□ 0.31
UBE3B-212ENST00000540230 NKX2-4Q9H2Z4 354 aa17■□□□□ 0.31
UBE3B-212ENST00000540230 PCDHA2Q9Y5H9 948 aa17■□□□□ 0.31
UBE3B-212ENST00000540230 CDY2AQ9Y6F7 541 aa17■□□□□ 0.31
UBE3B-212ENST00000540230 GHRP10912 638 aa16.99■□□□□ 0.31
UBE3B-212ENST00000540230 SFNP31947 248 aa16.99■□□□□ 0.31
UBE3B-212ENST00000540230 PRKCEQ02156 737 aa16.99■□□□□ 0.31
UBE3B-212ENST00000540230 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.99■□□□□ 0.31
UBE3B-212ENST00000540230 FAM184AQ8NB25 1140 aa16.99■□□□□ 0.31
UBE3B-212ENST00000540230 FBXO18Q8NFZ0 1043 aa16.99■□□□□ 0.31
UBE3B-212ENST00000540230 BBXQ8WY36 941 aaPredicted RBP16.99■□□□□ 0.31
UBE3B-212ENST00000540230 COL1A2P08123 1366 aa16.99■□□□□ 0.31
UBE3B-212ENST00000540230 TMEM150BA6NC51 233 aa16.98■□□□□ 0.31
UBE3B-212ENST00000540230 KIF28PB7ZC32 967 aa16.98■□□□□ 0.31
UBE3B-212ENST00000540230 ARHGEF15O94989 841 aa16.98■□□□□ 0.31
UBE3B-212ENST00000540230 C22orf31O95567 290 aa16.98■□□□□ 0.31
UBE3B-212ENST00000540230 OATP04181 439 aa16.98■□□□□ 0.31
UBE3B-212ENST00000540230 MRPS6P82932 125 aaKnown RBP16.98■□□□□ 0.31
UBE3B-212ENST00000540230 ZNF484Q5JVG2 852 aa16.98■□□□□ 0.31
UBE3B-212ENST00000540230 TNPO1Q92973 898 aaKnown RBP16.98■□□□□ 0.31
UBE3B-212ENST00000540230 FAM20AQ96MK3 541 aa16.98■□□□□ 0.31
UBE3B-212ENST00000540230 SLC9A7Q96T83 725 aa16.98■□□□□ 0.31
UBE3B-212ENST00000540230 ZNF576Q9H609 170 aa16.98■□□□□ 0.31
UBE3B-212ENST00000540230 SMIM35A0A1B0GVV1 85 aa16.97■□□□□ 0.31
UBE3B-212ENST00000540230 ABHD14A-ACY1A0A1B0GW23 586 aa16.97■□□□□ 0.31
UBE3B-212ENST00000540230 STBD1O95210 358 aa16.97■□□□□ 0.31
UBE3B-212ENST00000540230 KCNJ6P48051 423 aa16.97■□□□□ 0.31
UBE3B-212ENST00000540230 SPIRE1Q08AE8 756 aa16.97■□□□□ 0.31
UBE3B-212ENST00000540230 PPP2R5CQ13362 524 aa16.97■□□□□ 0.31
UBE3B-212ENST00000540230 IKBKEQ14164 716 aa16.97■□□□□ 0.31
UBE3B-212ENST00000540230 LPIN1Q14693 890 aa16.97■□□□□ 0.31
UBE3B-212ENST00000540230 GRIN2CQ14957 1233 aa16.97■□□□□ 0.31
UBE3B-212ENST00000540230 RAB30Q15771 203 aa16.97■□□□□ 0.31
UBE3B-212ENST00000540230 FBXO47Q5MNV8 452 aa16.97■□□□□ 0.31
UBE3B-212ENST00000540230 RSPH3Q86UC2 560 aa16.97■□□□□ 0.31
UBE3B-212ENST00000540230 HERC6Q8IVU3 1022 aa16.97■□□□□ 0.31
UBE3B-212ENST00000540230 BANK1Q8NDB2 785 aa16.97■□□□□ 0.31
UBE3B-212ENST00000540230 RDM1Q8NG50 284 aa16.97■□□□□ 0.31
UBE3B-212ENST00000540230 TMEM265A0A087WTH1 108 aa16.96■□□□□ 0.31
UBE3B-212ENST00000540230 TBX3O15119 743 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms