RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 STK4Q13043 487 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 HGSNATQ68CP4 663 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 CCDC26Q8TAB7 109 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 RSPH1Q8WYR4 309 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 STAMBPL1Q96FJ0 436 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 SLITRK6Q9H5Y7 841 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 GREM2Q9H772 168 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 FAM114A2Q9NRY5 505 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 CNOT8Q9UFF9 292 aaKnown RBP9.84□□□□□ -0.83
SNHG1-209ENST00000538654 PCDHA4Q9UN74 947 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 CTNND1O60716 968 aaKnown RBP9.84□□□□□ -0.83
SNHG1-209ENST00000538654 FGFR2P21802 821 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 CCND1P24385 295 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 KIF5BP33176 963 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 RASGRF1Q13972 1273 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 ZNF268Q14587 947 aaPredicted RBP9.84□□□□□ -0.83
SNHG1-209ENST00000538654 SLC18A3Q16572 532 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 ACCSLQ4AC99 568 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 CAPRIN2Q6IMN6 1127 aaKnown RBP9.84□□□□□ -0.83
SNHG1-209ENST00000538654 GALNT17Q6IS24 598 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 BZW1Q7L1Q6 419 aaKnown RBP9.84□□□□□ -0.83
SNHG1-209ENST00000538654 SRBD1Q8N5C6 995 aaKnown RBP9.84□□□□□ -0.83
SNHG1-209ENST00000538654 OR2W6PQ8NHA6 318 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 TLCD1Q96CP7 247 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 SCYL1Q96KG9 808 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 RSPH9Q9H1X1 276 aaPredicted RBP9.84□□□□□ -0.83
SNHG1-209ENST00000538654 KANSL2Q9H9L4 492 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 CORO1CQ9ULV4 474 aaPredicted RBP9.84□□□□□ -0.83
SNHG1-209ENST00000538654 NUB1Q9Y5A7 615 aa9.84□□□□□ -0.83
SNHG1-209ENST00000538654 PAPPAQ13219 1627 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 KCPQ6ZWJ8 1503 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 ERVV-2B6SEH9 535 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 F8W031 263 aaPredicted RBP9.83□□□□□ -0.84
SNHG1-209ENST00000538654 PGRMC1O00264 195 aaKnown RBP9.83□□□□□ -0.84
SNHG1-209ENST00000538654 CLTAP09496 248 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 NAT2P11245 290 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 ALADP13716 330 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 ADCY2Q08462 1091 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 SEPT2Q15019 361 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 TRADDQ15628 312 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 CDCA2Q69YH5 1023 aaPredicted RBP9.83□□□□□ -0.84
SNHG1-209ENST00000538654 TMC3Q7Z5M5 1100 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 FBXO33Q7Z6M2 555 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 PIGWQ7Z7B1 504 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 CABP7Q86V35 215 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 EEF2KMTQ96G04 330 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 ZMIZ1Q9ULJ6 1067 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 ATP6V0A2Q9Y487 856 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 GJA3Q9Y6H8 435 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 KCNK3O14649 394 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 PLCG1P19174 1290 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 DNA2P51530 1060 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 USP11P51784 963 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 KIAA0753Q2KHM9 967 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 PNMA8AQ86V59 439 aaPredicted RBP9.83□□□□□ -0.84
SNHG1-209ENST00000538654 GBP7Q8N8V2 638 aaPredicted RBP9.83□□□□□ -0.84
SNHG1-209ENST00000538654 ANKS1AQ92625 1134 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 L3MBTL3Q96JM7 780 aaPredicted RBP9.83□□□□□ -0.84
SNHG1-209ENST00000538654 ZNF317Q96PQ6 595 aaPredicted RBP9.83□□□□□ -0.84
SNHG1-209ENST00000538654 TSG101Q99816 390 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 SEMA6BQ9H3T3 888 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 HDAC9Q9UKV0 1011 aa9.83□□□□□ -0.84
SNHG1-209ENST00000538654 PVALEFA0A1B0GWK0 134 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 F8VZ95 297 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 SART1O43290 800 aaKnown RBP9.82□□□□□ -0.84
SNHG1-209ENST00000538654 NDUFV2P19404 249 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 KLRC1P26715 233 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 CEBPAP49715 358 aaPredicted RBP9.82□□□□□ -0.84
SNHG1-209ENST00000538654 ZNF131P52739 623 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 VAC14Q08AM6 782 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 RBBP5Q15291 538 aaKnown RBP9.82□□□□□ -0.84
SNHG1-209ENST00000538654 LMBRD2Q68DH5 695 aaPredicted RBP9.82□□□□□ -0.84
SNHG1-209ENST00000538654 TRPM8Q7Z2W7 1104 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 GUF1Q8N442 669 aaKnown RBP9.82□□□□□ -0.84
SNHG1-209ENST00000538654 THOC1Q96FV9 657 aaKnown RBP9.82□□□□□ -0.84
SNHG1-209ENST00000538654 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.82□□□□□ -0.842e-17■■■□□ 16.2
SNHG1-209ENST00000538654 FAM126AQ9BYI3 521 aaPredicted RBP9.82□□□□□ -0.84
SNHG1-209ENST00000538654 LRP2BPQ9P2M1 347 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 UTP11Q9Y3A2 253 aaKnown RBP9.82□□□□□ -0.84
SNHG1-209ENST00000538654 AFF2P51816 1311 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 PP2D1A8MPX8 630 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 FGRP09769 529 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 SEC14L1Q92503 715 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 ACSBG1Q96GR2 724 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 PLIN2Q99541 437 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 STMN4Q9H169 189 aaPredicted RBP9.82□□□□□ -0.84
SNHG1-209ENST00000538654 CCDC134Q9H6E4 229 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 RIC8AQ9NPQ8 531 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 C1orf167Q5SNV9 1468 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 MYH4Q9Y623 1939 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 CASZ1Q86V15 1759 aa9.82□□□□□ -0.84
SNHG1-209ENST00000538654 MAGEB6P1A0A0J9YX57 407 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 CEP104O60308 925 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 PPFIA2O75334 1257 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 SMNDC1O75940 238 aaKnown RBP eCLIP9.81□□□□□ -0.843e-14■■■■■ 31.4
SNHG1-209ENST00000538654 MMEP08473 750 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 FCER1AP12319 257 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 RWDD2BP57060 319 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 RNASE9P60153 205 aaKnown RBP9.81□□□□□ -0.84
SNHG1-209ENST00000538654 LMNB2Q03252 620 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms