RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 POLR2MP0CAP2 368 aa27.36■■□□□ 1.97
RAB40C-204ENST00000538492 MATR3P43243 847 aaKnown RBP eCLIP27.36■■□□□ 1.97
RAB40C-204ENST00000538492 CASP4P49662 377 aa27.36■■□□□ 1.97
RAB40C-204ENST00000538492 TCERG1LQ5VWI1 586 aa27.36■■□□□ 1.97
RAB40C-204ENST00000538492 IQCEQ6IPM2 695 aa27.36■■□□□ 1.97
RAB40C-204ENST00000538492 FAM151AQ8WW52 585 aa27.36■■□□□ 1.97
RAB40C-204ENST00000538492 HSD17B14Q9BPX1 270 aa27.36■■□□□ 1.97
RAB40C-204ENST00000538492 HYOU1Q9Y4L1 999 aa27.36■■□□□ 1.97
RAB40C-204ENST00000538492 SLITRK3O94933 977 aa27.36■■□□□ 1.97
RAB40C-204ENST00000538492 NR3C1P04150 777 aa27.36■■□□□ 1.97
RAB40C-204ENST00000538492 XRCC5P13010 732 aaKnown RBP27.36■■□□□ 1.97
RAB40C-204ENST00000538492 TNNT3P45378 269 aaPredicted RBP27.36■■□□□ 1.97
RAB40C-204ENST00000538492 SYNPO2Q9UMS6 1093 aa27.36■■□□□ 1.97
RAB40C-204ENST00000538492 AFPP02771 609 aaKnown RBP27.35■■□□□ 1.97
RAB40C-204ENST00000538492 ASIC2Q16515 512 aa27.35■■□□□ 1.97
RAB40C-204ENST00000538492 CCDC102AQ96A19 550 aa27.35■■□□□ 1.97
RAB40C-204ENST00000538492 TLR10Q9BXR5 811 aa27.35■■□□□ 1.97
RAB40C-204ENST00000538492 TMEM39BQ9GZU3 492 aa27.35■■□□□ 1.97
RAB40C-204ENST00000538492 VPS18Q9P253 973 aa27.35■■□□□ 1.97
RAB40C-204ENST00000538492 CNTNAP1P78357 1384 aa27.35■■□□□ 1.97
RAB40C-204ENST00000538492 MYBL2P10244 700 aa27.35■■□□□ 1.97
RAB40C-204ENST00000538492 PRLRP16471 622 aa27.35■■□□□ 1.97
RAB40C-204ENST00000538492 MCM3P25205 808 aa27.35■■□□□ 1.97
RAB40C-204ENST00000538492 MRPS25P82663 173 aaKnown RBP27.35■■□□□ 1.97
RAB40C-204ENST00000538492 SLC15A2Q16348 729 aa27.35■■□□□ 1.97
RAB40C-204ENST00000538492 SLC18A3Q16572 532 aa27.35■■□□□ 1.97
RAB40C-204ENST00000538492 KLHDC7AQ5VTJ3 777 aa27.35■■□□□ 1.97
RAB40C-204ENST00000538492 OGFOD1Q8N543 542 aa27.35■■□□□ 1.97
RAB40C-204ENST00000538492 TYW1Q9NV66 732 aaKnown RBP27.35■■□□□ 1.97
RAB40C-204ENST00000538492 FBXO28Q9NVF7 368 aa27.35■■□□□ 1.97
RAB40C-204ENST00000538492 PSMD10O75832 226 aa27.34■■□□□ 1.97
RAB40C-204ENST00000538492 EZH2Q15910 746 aaKnown RBP27.34■■□□□ 1.97
RAB40C-204ENST00000538492 ZNF772Q68DY9 489 aaPredicted RBP27.34■■□□□ 1.97
RAB40C-204ENST00000538492 TXLNBQ8N3L3 684 aa27.34■■□□□ 1.97
RAB40C-204ENST00000538492 GLIS2Q9BZE0 524 aaPredicted RBP27.34■■□□□ 1.97
RAB40C-204ENST00000538492 ZNF277Q9NRM2 450 aaPredicted RBP27.34■■□□□ 1.97
RAB40C-204ENST00000538492 AIPL1Q9NZN9 384 aa27.34■■□□□ 1.97
RAB40C-204ENST00000538492 ADAM21Q9UKJ8 722 aa27.34■■□□□ 1.97
RAB40C-204ENST00000538492 TCP1P17987 556 aaKnown RBP27.34■■□□□ 1.97
RAB40C-204ENST00000538492 MYCT1Q8N699 235 aa27.34■■□□□ 1.97
RAB40C-204ENST00000538492 SPATA4Q8NEY3 305 aa27.34■■□□□ 1.97
RAB40C-204ENST00000538492 PACSIN1Q9BY11 444 aa27.34■■□□□ 1.97
RAB40C-204ENST00000538492 KLRC1P26715 233 aa27.33■■□□□ 1.97
RAB40C-204ENST00000538492 NMT1P30419 496 aaKnown RBP27.33■■□□□ 1.97
RAB40C-204ENST00000538492 DNA2P51530 1060 aa27.33■■□□□ 1.97
RAB40C-204ENST00000538492 CCDC181Q5TID7 509 aa27.33■■□□□ 1.97
RAB40C-204ENST00000538492 LARGE2Q8N3Y3 721 aa27.33■■□□□ 1.97
RAB40C-204ENST00000538492 RNF10Q8N5U6 811 aaKnown RBP27.33■■□□□ 1.97
RAB40C-204ENST00000538492 RANBP17Q9H2T7 1088 aaKnown RBP27.33■■□□□ 1.97
RAB40C-204ENST00000538492 PCDHB13Q9Y5F0 798 aa27.33■■□□□ 1.97
RAB40C-204ENST00000538492 EXOC3L4Q17RC7 722 aa27.33■■□□□ 1.97
RAB40C-204ENST00000538492 BMT2Q1RMZ1 405 aa27.33■■□□□ 1.97
RAB40C-204ENST00000538492 ZC2HC1CQ53FD0 456 aaPredicted RBP27.33■■□□□ 1.97
RAB40C-204ENST00000538492 CHURC1Q8WUH1 139 aa27.33■■□□□ 1.97
RAB40C-204ENST00000538492 HDAC7Q8WUI4 952 aa27.33■■□□□ 1.97
RAB40C-204ENST00000538492 SPAG5Q96R06 1193 aa27.33■■□□□ 1.97
RAB40C-204ENST00000538492 GAS7O60861 476 aa27.32■■□□□ 1.96
RAB40C-204ENST00000538492 PHACTR2O75167 634 aa27.32■■□□□ 1.96
RAB40C-204ENST00000538492 FAM13AO94988 1023 aa27.32■■□□□ 1.96
RAB40C-204ENST00000538492 UCHL3P15374 230 aa27.32■■□□□ 1.96
RAB40C-204ENST00000538492 PON1P27169 355 aa27.32■■□□□ 1.96
RAB40C-204ENST00000538492 KIAA0753Q2KHM9 967 aa27.32■■□□□ 1.96
RAB40C-204ENST00000538492 MAP9Q49MG5 647 aa27.32■■□□□ 1.96
RAB40C-204ENST00000538492 DPY19L2P1Q6NXN4 242 aa27.32■■□□□ 1.96
RAB40C-204ENST00000538492 MSL3Q8N5Y2 521 aaKnown RBP27.32■■□□□ 1.96
RAB40C-204ENST00000538492 LRRC1Q9BTT6 524 aa27.32■■□□□ 1.96
RAB40C-204ENST00000538492 LUC7LQ9NQ29 371 aaKnown RBP27.32■■□□□ 1.96
RAB40C-204ENST00000538492 PALMO75781 387 aa27.32■■□□□ 1.96
RAB40C-204ENST00000538492 TRAF1Q13077 416 aa27.32■■□□□ 1.96
RAB40C-204ENST00000538492 KSR1Q8IVT5 923 aa27.32■■□□□ 1.96
RAB40C-204ENST00000538492 VCPKMTQ9H867 229 aa27.32■■□□□ 1.96
RAB40C-204ENST00000538492 TUFT1Q9NNX1 390 aa27.32■■□□□ 1.96
RAB40C-204ENST00000538492 RPL13P26373 211 aaKnown RBP27.31■■□□□ 1.96
RAB40C-204ENST00000538492 PTK2Q05397 1052 aa27.31■■□□□ 1.96
RAB40C-204ENST00000538492 CEP55Q53EZ4 464 aa27.31■■□□□ 1.96
RAB40C-204ENST00000538492 SLC5A5Q92911 643 aa27.31■■□□□ 1.96
RAB40C-204ENST00000538492 PDGFDQ9GZP0 370 aaPredicted RBP27.31■■□□□ 1.96
RAB40C-204ENST00000538492 OLFML3Q9NRN5 406 aa27.31■■□□□ 1.96
RAB40C-204ENST00000538492 TGFB1I1O43294 461 aa27.31■■□□□ 1.96
RAB40C-204ENST00000538492 ARP10275 920 aa27.31■■□□□ 1.96
RAB40C-204ENST00000538492 EPB41P11171 864 aaKnown RBP27.31■■□□□ 1.96
RAB40C-204ENST00000538492 PPP2R5CQ13362 524 aa27.31■■□□□ 1.96
RAB40C-204ENST00000538492 NAB2Q15742 525 aa27.31■■□□□ 1.96
RAB40C-204ENST00000538492 SPDYE2Q495Y8 402 aa27.31■■□□□ 1.96
RAB40C-204ENST00000538492 C1orf186Q6ZWK4 172 aa27.31■■□□□ 1.96
RAB40C-204ENST00000538492 MS4A14Q96JA4 679 aa27.31■■□□□ 1.96
RAB40C-204ENST00000538492 GMLQ99445 158 aa27.31■■□□□ 1.96
RAB40C-204ENST00000538492 WRAP73Q9P2S5 460 aaPredicted RBP27.31■■□□□ 1.96
RAB40C-204ENST00000538492 SCAF8Q9UPN6 1271 aaKnown RBP27.31■■□□□ 1.96
RAB40C-204ENST00000538492 FAN1Q9Y2M0 1017 aa27.31■■□□□ 1.96
RAB40C-204ENST00000538492 PSME4Q14997 1843 aa27.31■■□□□ 1.96
RAB40C-204ENST00000538492 FTCDO95954 541 aa27.3■■□□□ 1.96
RAB40C-204ENST00000538492 VIL1P09327 827 aaKnown RBP27.3■■□□□ 1.96
RAB40C-204ENST00000538492 PRELPP51888 382 aa27.3■■□□□ 1.96
RAB40C-204ENST00000538492 CCDC70Q6NSX1 233 aa27.3■■□□□ 1.96
RAB40C-204ENST00000538492 CCNI2Q6ZMN8 369 aaPredicted RBP27.3■■□□□ 1.96
RAB40C-204ENST00000538492 MMGT1Q8N4V1 131 aa27.3■■□□□ 1.96
RAB40C-204ENST00000538492 SLC35C1Q96A29 364 aa27.3■■□□□ 1.96
RAB40C-204ENST00000538492 ZNF577Q9BSK1 485 aa27.3■■□□□ 1.96
RAB40C-204ENST00000538492 MRPL11Q9Y3B7 192 aaKnown RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms