RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 CLK2P49760 499 aaKnown RBP3.98□□□□□ -1.77
PTPN22-211ENST00000538253 ACLYP53396 1101 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 PPFIA1Q13136 1202 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 PPP2R5CQ13362 524 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 MFSD10Q14728 455 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 LRRC41Q15345 812 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 UVSSAQ2YD98 709 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 FAM47CQ5HY64 1035 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 MFSD4BQ5TF39 518 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 DLK2Q6UY11 383 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 C4orf19Q8IY42 314 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 CEP57L1Q8IYX8 460 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 MICALL1Q8N3F8 863 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 ACRBPQ8NEB7 543 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 KLHDC9Q8NEP7 349 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 NPLOC4Q8TAT6 608 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 PIBF1Q8WXW3 757 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 GPKOWQ92917 476 aaPredicted RBP eCLIP3.98□□□□□ -1.77
PTPN22-211ENST00000538253 PHKBQ93100 1093 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 DISC1Q9NRI5 854 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 DACH1Q9UI36 760 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 DBR1Q9UK59 544 aaKnown RBP3.98□□□□□ -1.77
PTPN22-211ENST00000538253 POLR2AP24928 1970 aaKnown RBP3.98□□□□□ -1.77
PTPN22-211ENST00000538253 BAZ2AQ9UIF9 1905 aaKnown RBP3.98□□□□□ -1.77
PTPN22-211ENST00000538253 SMIM35A0A1B0GVV1 85 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 CCDC189A1A4V9 331 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 CTAGE5O15320 804 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 CYTH3O43739 400 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 CHGBP05060 677 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 PGK2P07205 417 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 RAG1P15918 1043 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 SFPQP23246 707 aaKnown RBP eCLIP3.98□□□□□ -1.77
PTPN22-211ENST00000538253 HTRA3P83110 453 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 TBC1D8BQ0IIM8 1120 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 MKRN4PQ13434 485 aaPredicted RBP3.98□□□□□ -1.77
PTPN22-211ENST00000538253 BIRC2Q13490 618 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 RAB30Q15771 203 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 KRI1Q8N9T8 703 aaKnown RBP3.98□□□□□ -1.77
PTPN22-211ENST00000538253 IQUBQ8NA54 791 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 DPF3Q92784 378 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 PGBD4Q96DM1 585 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 ZIC5Q96T25 663 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 PAIP2Q9BPZ3 127 aaKnown RBP3.98□□□□□ -1.77
PTPN22-211ENST00000538253 GCOM2Q9BZD3 368 aaPredicted RBP3.98□□□□□ -1.77
PTPN22-211ENST00000538253 UNC93B1Q9H1C4 597 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 INCENPQ9NQS7 918 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 AAASQ9NRG9 546 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 KCNH7Q9NS40 1196 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 TMEM39AQ9NV64 488 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 DACT1Q9NYF0 836 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 DONSONQ9NYP3 566 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 GABRQQ9UN88 632 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 OTOFQ9HC10 1997 aa3.98□□□□□ -1.77
PTPN22-211ENST00000538253 TULP2O00295 520 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 GPR182O15218 404 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 LPXNO60711 386 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 SNAI1O95863 264 aaPredicted RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 MBD3O95983 291 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 MMP3P08254 477 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 CLTBP09497 229 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 NAT1P18440 290 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 RXRAP19793 462 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 RGS19P49795 217 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 FOSBP53539 338 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 TERF1P54274 439 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 RTP1P59025 263 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 POU5F1Q01860 360 aaKnown RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 RBL2Q08999 1139 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 POSTNQ15063 836 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 SURF1Q15526 300 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 SKOR2Q2VWA4 1001 aaPredicted RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 LONRF3Q496Y0 759 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 KIAA1755Q5JYT7 1200 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 MYSM1Q5VVJ2 828 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 USP17L6PQ6QN14 398 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 SRGAP1Q7Z6B7 1085 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 TCEANC2Q96MN5 208 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 ADPGKQ9BRR6 497 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 ATP6V0A4Q9HBG4 840 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 FAM217BQ9NTX9 383 aaPredicted RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 LARSQ9P2J5 1176 aaKnown RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 FEZ2Q9UHY8 353 aaPredicted RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 FRMD4BQ9Y2L6 1034 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 A0A0G2JMZ2 1700 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 POTEB3A0JP26 581 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 H3BRB1 525 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 F2P00734 622 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 ELNP15502 786 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 UBA1P22314 1058 aaKnown RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 HOXA13P31271 388 aaPredicted RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 CCT6AP40227 531 aaKnown RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 ACTR2P61160 394 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 CNTN2Q02246 1040 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 ITGA7Q13683 1181 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 PKN1Q16512 942 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 INF2Q27J81 1249 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 L1TD1Q5T7N2 865 aaKnown RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 ANO1Q5XXA6 986 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 CCDC62Q6P9F0 684 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 POTEBQ6S5H4 581 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms