RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 PSPC1Q8WXF1 523 aaKnown RBP5.81□□□□□ -1.48
LRP6-203ENST00000538239 HSPH1Q92598 858 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 KCNA4P22459 653 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 CDC27P30260 824 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 TMEM62Q0P6H9 643 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 TOB2Q14106 344 aaPredicted RBP5.81□□□□□ -1.48
LRP6-203ENST00000538239 C12orf60Q5U649 245 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 DENND2CQ68D51 928 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 PPP1R18Q6NYC8 613 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 SFR1Q86XK3 245 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 BEST2Q8NFU1 509 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 ZKSCAN4Q969J2 545 aaPredicted RBP5.81□□□□□ -1.48
LRP6-203ENST00000538239 RAB17Q9H0T7 212 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 TOPORSQ9NS56 1045 aaPredicted RBP5.81□□□□□ -1.48
LRP6-203ENST00000538239 POTEFA5A3E0 1075 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 C19orf81C9J6K1 198 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 PFDN6O15212 129 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 POTEIP0CG38 1075 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 GYS1P13807 737 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 CASP14P31944 242 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 POTEGQ6S5H5 508 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 POTEEQ6S8J3 1075 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 TTC30BQ8N4P2 665 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 TRIM58Q8NG06 486 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 LXNQ9BS40 222 aa5.81□□□□□ -1.48
LRP6-203ENST00000538239 A0A1W2PQ27 194 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 A0A1W2PQ64 194 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 A0A1W2PQD8 194 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 IPO5O00410 1097 aaKnown RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 LDHAP00338 332 aaKnown RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 ACTN1P12814 892 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 KLRK1P26718 216 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 MAN2A1Q16706 1144 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 CACYBPQ9HB71 228 aaKnown RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 SLFN14P0C7P3 912 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 ATF2P15336 505 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 SFNP31947 248 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 ARL4AP40617 200 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 QARSP47897 775 aaKnown RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 RBL2Q08999 1139 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 PSMD2Q13200 908 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 ALCAMQ13740 583 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 BAATQ14032 418 aaPredicted RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 ZNF667Q5HYK9 610 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 TMED8Q6PL24 325 aaPredicted RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 MCPH1Q8NEM0 835 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 RBM46Q8TBY0 533 aaKnown RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 TRIM56Q9BRZ2 755 aaKnown RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 ZWILCHQ9H900 591 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 MOSPD1Q9UJG1 213 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 PNPLA6Q8IY17 1366 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 I3L4J1 428 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 WDR46O15213 610 aaKnown RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 HUS1O60921 280 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 HEXIM1O94992 359 aaKnown RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 RPS12P25398 132 aaKnown RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 ECE1P42892 770 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 FCGRTP55899 365 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 ZNF699Q32M78 642 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 RAD54LQ92698 747 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 GDAP1L1Q96MZ0 367 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 HINFPQ9BQA5 517 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 BARHL2Q9NY43 387 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 SAR1BQ9Y6B6 198 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 TDP2O95551 362 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 P4HBP07237 508 aaKnown RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 SRGAP2BP0DMP2 458 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 CAPN2P17655 700 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 CALRP27797 417 aaKnown RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 PHBP35232 272 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 EPHB1P54762 984 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 FKBP3Q00688 224 aaKnown RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 TUBB2AQ13885 445 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 DPCR1Q3MIW9 517 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 ANKRD42Q8N9B4 389 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 GPRC5AQ8NFJ5 357 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 ATP2A3Q93084 1043 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 TUBB2BQ9BVA1 445 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 CALN1Q9BXU9 219 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 SMYD2Q9NRG4 433 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 PIN4Q9Y237 131 aaKnown RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 KDM6AO15550 1401 aaPredicted RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 PRPSAP2O60256 369 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 CPB1P15086 417 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 CIITAP33076 1130 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 ZNF445P59923 1031 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 RESTQ13127 1097 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 PAK2Q13177 524 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 SEPT6Q14141 434 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 ERCC6LQ2NKX8 1250 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 RNF219Q5W0B1 726 aaPredicted RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 NBPF11Q86T75 865 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 PASD1Q8IV76 773 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 MB21D2Q8IYB1 491 aaPredicted RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 UHMK1Q8TAS1 419 aaKnown RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 GDAP1Q8TB36 358 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 FAM151AQ8WW52 585 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 TRIM11Q96F44 468 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 RABEP2Q9H5N1 569 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 JPH1Q9HDC5 661 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms