RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 ATP8A1Q9Y2Q0 1164 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 EFCAB8A8MWE9 144 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 GNGT2O14610 69 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 GPC4O75487 556 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 PMLP29590 882 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 YWHAHQ04917 246 aaPredicted RBP12.08□□□□□ -0.48
LINC00346-201ENST00000538077 SLC39A14Q15043 492 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 ACCSLQ4AC99 568 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.08□□□□□ -0.48
LINC00346-201ENST00000538077 PPP6R3Q5H9R7 873 aaPredicted RBP12.08□□□□□ -0.48
LINC00346-201ENST00000538077 SPATA33Q96N06 139 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 MRPL46Q9H2W6 279 aaKnown RBP12.08□□□□□ -0.48
LINC00346-201ENST00000538077 CLTCQ00610 1675 aaKnown RBP12.08□□□□□ -0.48
LINC00346-201ENST00000538077 SYNDIG1LA6NDD5 238 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 ADORA2BP29275 332 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 SLC7A5Q01650 507 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 DBN1Q16643 649 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 SWSAP1Q6NVH7 229 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 CYB5R4Q7L1T6 521 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 CFAP61Q8NHU2 1237 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 URGCPQ8TCY9 931 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 AK8Q96MA6 479 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 FAM213AQ9BRX8 229 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 GPR108Q9NPR9 543 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 RPS6KA4O75676 772 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 RFC1P35251 1148 aaPredicted RBP12.08□□□□□ -0.48
LINC00346-201ENST00000538077 MSH2P43246 934 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 RC3H1Q5TC82 1133 aaKnown RBP12.08□□□□□ -0.48
LINC00346-201ENST00000538077 EPB41L5Q9HCM4 733 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 FEM1BQ9UK73 627 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 RBM6P78332 1123 aaKnown RBP12.07□□□□□ -0.48
LINC00346-201ENST00000538077 CDR2Q01850 454 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 NME3Q13232 169 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 R3HDM1Q15032 1099 aaKnown RBP12.07□□□□□ -0.48
LINC00346-201ENST00000538077 ZNF568Q3ZCX4 644 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 TBC1D10CQ8IV04 446 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 DCAF4Q8WV16 495 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 DHTKD1Q96HY7 919 aaPredicted RBP12.07□□□□□ -0.48
LINC00346-201ENST00000538077 RPGRIP1Q96KN7 1286 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 CLTCL1P53675 1640 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 GPC3P51654 580 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 ARMCX2Q7L311 632 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 STK17AQ9UEE5 414 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 KIF3CO14782 793 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 ECEL1O95672 775 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 EIF4A3P38919 411 aaKnown RBP12.07□□□□□ -0.48
LINC00346-201ENST00000538077 MXI1P50539 228 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 CYP27A1Q02318 531 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 MAN2A1Q16706 1144 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 MYRIPQ8NFW9 859 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 TRIM11Q96F44 468 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 MXD3Q9BW11 206 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 MAGEF1Q9HAY2 307 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 GOLGA8MH3BSY2 632 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 GCFC2P16383 781 aaKnown RBP12.07□□□□□ -0.48
LINC00346-201ENST00000538077 RASSF2P50749 326 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 SPP2Q13103 211 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 PRAMEF18Q5VWM3 479 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 ERICH1Q86X53 443 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 HVCN1Q96D96 273 aa12.07□□□□□ -0.48
LINC00346-201ENST00000538077 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.07□□□□□ -0.48
LINC00346-201ENST00000538077 IQGAP3Q86VI3 1631 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 ARHGAP4P98171 946 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 SLMAPQ14BN4 828 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 FGD4Q96M96 766 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 SYNDIG1Q9H7V2 258 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 HOXC10Q9NYD6 342 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 PYCARDQ9ULZ3 195 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 SMIM24O75264 130 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 CD2BP2O95400 341 aaKnown RBP12.06□□□□□ -0.48
LINC00346-201ENST00000538077 ARL13BQ3SXY8 428 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 POTEDQ86YR6 584 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 BBOF1Q8ND07 529 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 TCP11Q8WWU5 503 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 CAPS2Q9BXY5 557 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 GINM1Q9NU53 330 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 PCDHA13Q9Y5I0 950 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 CAPN7Q9Y6W3 813 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 MBD5Q9P267 1494 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 NEMP1O14524 444 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 GNAT1P11488 350 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 ATICP31939 592 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 PRELPP51888 382 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 FBXW4P57775 412 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 RAET1EQ8TD07 263 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 CUEDC2Q9H467 287 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 RPAP3Q9H6T3 665 aaPredicted RBP12.06□□□□□ -0.48
LINC00346-201ENST00000538077 SARS2Q9NP81 518 aaKnown RBP12.06□□□□□ -0.48
LINC00346-201ENST00000538077 SYNMO15061 1565 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 CPDO75976 1380 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 ERVK-7P63135 1459 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 MOCS2O96007 188 aaPredicted RBP12.06□□□□□ -0.48
LINC00346-201ENST00000538077 FASTKD5Q7L8L6 764 aaKnown RBP12.06□□□□□ -0.48
LINC00346-201ENST00000538077 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.06□□□□□ -0.48
LINC00346-201ENST00000538077 SDCCAG3Q96C92 435 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 FAF2Q96CS3 445 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 TRPC7Q9HCX4 862 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 KRT10P13645 584 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 STX1BP61266 288 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 HOMER3Q9NSC5 361 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms