RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 PACSIN2Q9UNF0 486 aaPredicted RBP13.29□□□□□ -0.28
CPSF7-218ENST00000537641 PCDHA2Q9Y5H9 948 aa13.29□□□□□ -0.28
CPSF7-218ENST00000537641 GOLGA6L7A0A1B0GV03 622 aa13.28□□□□□ -0.28
CPSF7-218ENST00000537641 FRMD3A2A2Y4 597 aa13.28□□□□□ -0.28
CPSF7-218ENST00000537641 GMNCA6NCL1 334 aa13.28□□□□□ -0.28
CPSF7-218ENST00000537641 CETN3O15182 167 aa13.28□□□□□ -0.28
CPSF7-218ENST00000537641 TRIM37O94972 964 aa13.28□□□□□ -0.28
CPSF7-218ENST00000537641 ZBTB48P10074 688 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-218ENST00000537641 CLK2P49760 499 aaKnown RBP13.28□□□□□ -0.28
CPSF7-218ENST00000537641 DNA2P51530 1060 aa13.28□□□□□ -0.28
CPSF7-218ENST00000537641 PPP2R2AP63151 447 aa13.28□□□□□ -0.28
CPSF7-218ENST00000537641 UAP1Q16222 522 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-218ENST00000537641 RNF187Q5TA31 235 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-218ENST00000537641 FRMD5Q7Z6J6 570 aa13.28□□□□□ -0.28
CPSF7-218ENST00000537641 LRRC57Q8N9N7 239 aa13.28□□□□□ -0.28
CPSF7-218ENST00000537641 LMBR1Q8WVP7 490 aa13.28□□□□□ -0.28
CPSF7-218ENST00000537641 CEP95Q96GE4 821 aa13.28□□□□□ -0.28
CPSF7-218ENST00000537641 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.28□□□□□ -0.281e-7■■■■□ 22.8
CPSF7-218ENST00000537641 VAT1LQ9HCJ6 419 aa13.28□□□□□ -0.28
CPSF7-218ENST00000537641 ADAMTS1Q9UHI8 967 aa13.28□□□□□ -0.28
CPSF7-218ENST00000537641 NOC2LQ9Y3T9 749 aaKnown RBP13.28□□□□□ -0.28
CPSF7-218ENST00000537641 DAGLAQ9Y4D2 1042 aa13.28□□□□□ -0.28
CPSF7-218ENST00000537641 COL11A2P13942 1736 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-218ENST00000537641 PITPNM2Q9BZ72 1349 aa13.28□□□□□ -0.28
CPSF7-218ENST00000537641 TRAPPC3O43617 180 aa13.27□□□□□ -0.28
CPSF7-218ENST00000537641 RASSF9O75901 435 aa13.27□□□□□ -0.28
CPSF7-218ENST00000537641 FLOT1O75955 427 aa13.27□□□□□ -0.28
CPSF7-218ENST00000537641 PDHBP11177 359 aa13.27□□□□□ -0.28
CPSF7-218ENST00000537641 CTNNA1P35221 906 aaKnown RBP13.27□□□□□ -0.28
CPSF7-218ENST00000537641 SEC24CP53992 1094 aa13.27□□□□□ -0.28
CPSF7-218ENST00000537641 NPEPPSP55786 919 aa13.27□□□□□ -0.28
CPSF7-218ENST00000537641 ZNF844Q08AG5 666 aa13.27□□□□□ -0.28
CPSF7-218ENST00000537641 KCNH2Q12809 1159 aa13.27□□□□□ -0.28
CPSF7-218ENST00000537641 ECM1Q16610 540 aa13.27□□□□□ -0.28
CPSF7-218ENST00000537641 CCDC121Q6ZUS5 278 aa13.27□□□□□ -0.28
CPSF7-218ENST00000537641 IRF2BP2Q7Z5L9 587 aa13.27□□□□□ -0.28
CPSF7-218ENST00000537641 SLFN11Q7Z7L1 901 aa13.27□□□□□ -0.28
CPSF7-218ENST00000537641 SYCE1Q8N0S2 351 aa13.27□□□□□ -0.28
CPSF7-218ENST00000537641 SEC14L1Q92503 715 aa13.27□□□□□ -0.28
CPSF7-218ENST00000537641 FAM114A2Q9NRY5 505 aa13.27□□□□□ -0.28
CPSF7-218ENST00000537641 SUCLA2Q9P2R7 463 aaPredicted RBP13.27□□□□□ -0.28
CPSF7-218ENST00000537641 DDX25Q9UHL0 483 aaKnown RBP13.27□□□□□ -0.28
CPSF7-218ENST00000537641 FBXL5Q9UKA1 691 aa13.27□□□□□ -0.28
CPSF7-218ENST00000537641 USP17L5A8MUK1 530 aa13.27□□□□□ -0.29
CPSF7-218ENST00000537641 CEP104O60308 925 aa13.27□□□□□ -0.29
CPSF7-218ENST00000537641 GFPT2O94808 682 aa13.27□□□□□ -0.29
CPSF7-218ENST00000537641 SNHG28P0DPA3 235 aa13.27□□□□□ -0.29
CPSF7-218ENST00000537641 TNNI2P48788 182 aa13.27□□□□□ -0.29
CPSF7-218ENST00000537641 CDR1P51861 262 aa13.27□□□□□ -0.29
CPSF7-218ENST00000537641 GTF2IP78347 998 aa13.27□□□□□ -0.29
CPSF7-218ENST00000537641 DPY19L2P1Q6NXN4 242 aa13.27□□□□□ -0.29
CPSF7-218ENST00000537641 ZNF571Q7Z3V5 609 aaPredicted RBP13.27□□□□□ -0.29
CPSF7-218ENST00000537641 CCDC13Q8IYE1 715 aa13.27□□□□□ -0.29
CPSF7-218ENST00000537641 TPCN2Q8NHX9 752 aa13.27□□□□□ -0.29
CPSF7-218ENST00000537641 CCDC26Q8TAB7 109 aa13.27□□□□□ -0.29
CPSF7-218ENST00000537641 SCFD1Q8WVM8 642 aa13.27□□□□□ -0.29
CPSF7-218ENST00000537641 CNOT10Q9H9A5 744 aaKnown RBP13.27□□□□□ -0.29
CPSF7-218ENST00000537641 EMILIN3Q9NT22 766 aa13.27□□□□□ -0.29
CPSF7-218ENST00000537641 HDAC9Q9UKV0 1011 aa13.27□□□□□ -0.29
CPSF7-218ENST00000537641 STXBP5LQ9Y2K9 1186 aa13.27□□□□□ -0.29
CPSF7-218ENST00000537641 SART1O43290 800 aaKnown RBP13.26□□□□□ -0.29
CPSF7-218ENST00000537641 AFPP02771 609 aaKnown RBP13.26□□□□□ -0.29
CPSF7-218ENST00000537641 PLA2G4BP0C869 781 aa13.26□□□□□ -0.29
CPSF7-218ENST00000537641 ERCC3P19447 782 aa13.26□□□□□ -0.29
CPSF7-218ENST00000537641 HPDP32754 393 aaPredicted RBP13.26□□□□□ -0.29
CPSF7-218ENST00000537641 MAP2K2P36507 400 aa13.26□□□□□ -0.29
CPSF7-218ENST00000537641 EIF3BP55884 814 aaKnown RBP13.26□□□□□ -0.29
CPSF7-218ENST00000537641 IFT88Q13099 833 aa13.26□□□□□ -0.29
CPSF7-218ENST00000537641 ADAM9Q13443 819 aa13.26□□□□□ -0.29
CPSF7-218ENST00000537641 TRADDQ15628 312 aa13.26□□□□□ -0.29
CPSF7-218ENST00000537641 VPS36Q86VN1 386 aa13.26□□□□□ -0.29
CPSF7-218ENST00000537641 CCDC50Q8IVM0 306 aa13.26□□□□□ -0.29
CPSF7-218ENST00000537641 NLGN1Q8N2Q7 840 aa13.26□□□□□ -0.29
CPSF7-218ENST00000537641 HAS1Q92839 578 aa13.26□□□□□ -0.29
CPSF7-218ENST00000537641 COA7Q96BR5 231 aa13.26□□□□□ -0.29
CPSF7-218ENST00000537641 SPAG5Q96R06 1193 aa13.26□□□□□ -0.29
CPSF7-218ENST00000537641 MXD3Q9BW11 206 aa13.26□□□□□ -0.29
CPSF7-218ENST00000537641 UBA5Q9GZZ9 404 aa13.26□□□□□ -0.29
CPSF7-218ENST00000537641 PPANQ9NQ55 473 aaKnown RBP13.26□□□□□ -0.29
CPSF7-218ENST00000537641 KLC4Q9NSK0 619 aa13.26□□□□□ -0.29
CPSF7-218ENST00000537641 NAGPAQ9UK23 515 aa13.26□□□□□ -0.29
CPSF7-218ENST00000537641 TTC7AQ9ULT0 858 aaPredicted RBP13.26□□□□□ -0.29
CPSF7-218ENST00000537641 TRAF3IP3Q9Y228 551 aa13.26□□□□□ -0.29
CPSF7-218ENST00000537641 DIS3Q9Y2L1 958 aaKnown RBP13.26□□□□□ -0.29
CPSF7-218ENST00000537641 PNMA6FA0A0J9YX94 578 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 GHRP10912 638 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 NPR1P16066 1061 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 CYP11B2P19099 503 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 RNASE9P60153 205 aaKnown RBP13.25□□□□□ -0.29
CPSF7-218ENST00000537641 ARID5AQ03989 594 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 PTK2Q05397 1052 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 PPP2R5EQ16537 467 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 LACTB2Q53H82 288 aaPredicted RBP13.25□□□□□ -0.29
CPSF7-218ENST00000537641 ALKBH5Q6P6C2 394 aaKnown RBP13.25□□□□□ -0.29
CPSF7-218ENST00000537641 GPBP1Q86WP2 473 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 NELFCDQ8IXH7 590 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 METTL13Q8N6R0 699 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 CUL5Q93034 780 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 FGFBP2Q9BYJ0 223 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 NEUROG2Q9H2A3 272 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms