RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 SECISBP2LQ93073 1101 aaKnown RBP17.24■□□□□ 0.35
MKS1-204ENST00000537529 PARVGQ9HBI0 331 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 SLC38A10Q9HBR0 1119 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 LTBP3Q9NS15 1303 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 MAP3K20Q9NYL2 800 aaKnown RBP17.24■□□□□ 0.35
MKS1-204ENST00000537529 ODF2LQ9ULJ1 636 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 CTDP1Q9Y5B0 961 aaPredicted RBP17.24■□□□□ 0.35
MKS1-204ENST00000537529 ANO9A1A5B4 782 aa17.23■□□□□ 0.35
MKS1-204ENST00000537529 AFPP02771 609 aaKnown RBP17.23■□□□□ 0.35
MKS1-204ENST00000537529 ALAS1P13196 640 aa17.23■□□□□ 0.35
MKS1-204ENST00000537529 POLR2FP61218 127 aaKnown RBP17.23■□□□□ 0.35
MKS1-204ENST00000537529 SLC9C1Q4G0N8 1177 aa17.23■□□□□ 0.35
MKS1-204ENST00000537529 ZFP91Q96JP5 570 aaPredicted RBP17.23■□□□□ 0.35
MKS1-204ENST00000537529 LXNQ9BS40 222 aa17.23■□□□□ 0.35
MKS1-204ENST00000537529 NLRC4Q9NPP4 1024 aa17.23■□□□□ 0.35
MKS1-204ENST00000537529 COL20A1Q9P218 1284 aa17.23■□□□□ 0.35
MKS1-204ENST00000537529 FLOT1O75955 427 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 SERPING1P05155 500 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 XRCC5P13010 732 aaKnown RBP17.22■□□□□ 0.35
MKS1-204ENST00000537529 ITGB5P18084 799 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 USP14P54578 494 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 TDRD12Q587J7 1177 aaKnown RBP17.22■□□□□ 0.35
MKS1-204ENST00000537529 PAPD7Q5XG87 772 aaKnown RBP17.22■□□□□ 0.35
MKS1-204ENST00000537529 PCNX4Q63HM2 1172 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 DCAF15Q66K64 600 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 CPXCR1Q8N123 301 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 KRT222Q8N1A0 295 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 CRACR2AQ9BSW2 395 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 PARD6BQ9BYG5 372 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 RAVER2Q9HCJ3 691 aaKnown RBP17.22■□□□□ 0.35
MKS1-204ENST00000537529 PPP1R1BQ9UD71 204 aaPredicted RBP17.22■□□□□ 0.35
MKS1-204ENST00000537529 HACL1Q9UJ83 578 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 PPP1R9AQ9ULJ8 1098 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 BRCA1P38398 1863 aaKnown RBP17.22■□□□□ 0.35
MKS1-204ENST00000537529 MACROD2A1Z1Q3 448 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 ARHGEF35A5YM69 484 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 ZBED4O75132 1171 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 ZSCAN20P17040 1043 aaPredicted RBP17.22■□□□□ 0.35
MKS1-204ENST00000537529 VCAM1P19320 739 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 ZNF131P52739 623 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 NFIL3Q16649 462 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 MIER3Q7Z3K6 550 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 GANQ9H2C0 597 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 EPC1Q9H2F5 836 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 SAR1BQ9Y6B6 198 aa17.22■□□□□ 0.35
MKS1-204ENST00000537529 TACC1O75410 805 aa17.21■□□□□ 0.35
MKS1-204ENST00000537529 ATP1A1P05023 1023 aaKnown RBP17.21■□□□□ 0.35
MKS1-204ENST00000537529 FDX1P10109 184 aa17.21■□□□□ 0.35
MKS1-204ENST00000537529 MTMR2Q13614 643 aa17.21■□□□□ 0.35
MKS1-204ENST00000537529 ASTE1Q2TB18 679 aaPredicted RBP17.21■□□□□ 0.35
MKS1-204ENST00000537529 TBC1D10BQ4KMP7 808 aaPredicted RBP17.21■□□□□ 0.35
MKS1-204ENST00000537529 HGSNATQ68CP4 663 aa17.21■□□□□ 0.35
MKS1-204ENST00000537529 SAMD7Q7Z3H4 446 aa17.21■□□□□ 0.35
MKS1-204ENST00000537529 TRIM58Q8NG06 486 aa17.21■□□□□ 0.35
MKS1-204ENST00000537529 SYTL5Q8TDW5 730 aaPredicted RBP17.21■□□□□ 0.35
MKS1-204ENST00000537529 LUC7LQ9NQ29 371 aaKnown RBP17.21■□□□□ 0.35
MKS1-204ENST00000537529 KCNH7Q9NS40 1196 aa17.21■□□□□ 0.35
MKS1-204ENST00000537529 FAM53CQ9NYF3 392 aa17.21■□□□□ 0.35
MKS1-204ENST00000537529 WRAP73Q9P2S5 460 aaPredicted RBP17.21■□□□□ 0.35
MKS1-204ENST00000537529 CNOT7Q9UIV1 285 aaKnown RBP17.21■□□□□ 0.35
MKS1-204ENST00000537529 BCS1LQ9Y276 419 aa17.21■□□□□ 0.35
MKS1-204ENST00000537529 UBIAD1Q9Y5Z9 338 aa17.21■□□□□ 0.35
MKS1-204ENST00000537529 GJA3Q9Y6H8 435 aa17.21■□□□□ 0.35
MKS1-204ENST00000537529 SFI1A8K8P3 1242 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 DDX39AO00148 427 aaKnown RBP17.2■□□□□ 0.34
MKS1-204ENST00000537529 AKAP3O75969 853 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 ZRANB2O95218 330 aaKnown RBP eCLIP17.2■□□□□ 0.34
MKS1-204ENST00000537529 GUCY2CP25092 1073 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 MAGEA1P43355 309 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 CKAP4Q07065 602 aaKnown RBP17.2■□□□□ 0.34
MKS1-204ENST00000537529 BRD3Q15059 726 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 TKFCQ3LXA3 575 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 BANK1Q8NDB2 785 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 IL31RAQ8NI17 732 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 RPAP3Q9H6T3 665 aaPredicted RBP17.2■□□□□ 0.34
MKS1-204ENST00000537529 PLCB1Q9NQ66 1216 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 ZMYM2Q9UBW7 1377 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 RBAK-RBAKDNI3L0D1 243 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 ENC1O14682 589 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 ZBTB39O15060 712 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 ATP8B1O43520 1251 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 NMT1P30419 496 aaKnown RBP17.2■□□□□ 0.34
MKS1-204ENST00000537529 RAPGEF1Q13905 1077 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 ASIC2Q16515 512 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 MUM1L1Q5H9M0 696 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 CC2D1AQ6P1N0 951 aaPredicted RBP17.2■□□□□ 0.34
MKS1-204ENST00000537529 FAM178BQ8IXR5 827 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 MSANTD4Q8NCY6 345 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 AGO4Q9HCK5 861 aaKnown RBP17.2■□□□□ 0.34
MKS1-204ENST00000537529 POLD4Q9HCU8 107 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 JADE2Q9NQC1 790 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 HOMER2Q9NSB8 354 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 DUSP10Q9Y6W6 482 aa17.2■□□□□ 0.34
MKS1-204ENST00000537529 ASTN2O75129 1339 aaPredicted RBP17.19■□□□□ 0.34
MKS1-204ENST00000537529 PJA2O43164 708 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 TGFB1I1O43294 461 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 PPP1R12BO60237 982 aaPredicted RBP17.19■□□□□ 0.34
MKS1-204ENST00000537529 P4HBP07237 508 aaKnown RBP17.19■□□□□ 0.34
MKS1-204ENST00000537529 DCAF17Q5H9S7 520 aaPredicted RBP17.19■□□□□ 0.34
MKS1-204ENST00000537529 ALS2CR12Q96Q35 445 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms