RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 IFNAR1P17181 557 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 ABCD1P33897 745 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 SERPINB8P50452 374 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 CUL4BQ13620 913 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 USH1GQ495M9 461 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 CCDC92Q53HC0 331 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-213ENST00000537002 WASHC2DQ5SRD0 308 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 ARL6IP4Q66PJ3 421 aaKnown RBP5.83□□□□□ -1.48
PTPRD-213ENST00000537002 XPO6Q96QU8 1125 aaKnown RBP5.83□□□□□ -1.48
PTPRD-213ENST00000537002 LBHD1Q9BQE6 289 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-213ENST00000537002 ETNK1Q9HBU6 452 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 BZW2Q9Y6E2 419 aaKnown RBP5.83□□□□□ -1.48
PTPRD-213ENST00000537002 MAP3K19Q56UN5 1328 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 TRIM49BA6NDI0 452 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 KIF28PB7ZC32 967 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 ATF2P15336 505 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 NQO1P15559 274 aaKnown RBP5.83□□□□□ -1.48
PTPRD-213ENST00000537002 ATP6V1C1P21283 382 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 HERC4Q5GLZ8 1057 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-213ENST00000537002 ZNF658Q5TYW1 1059 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-213ENST00000537002 SHC4Q6S5L8 630 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 ARHGEF18Q6ZSZ5 1173 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 KIF2BQ8N4N8 673 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 FAM133AQ8N9E0 248 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 CXorf38Q8TB03 319 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 LGR6Q9HBX8 967 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 ATXN10Q9UBB4 475 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 HDAC9Q9UKV0 1011 aa5.83□□□□□ -1.48
PTPRD-213ENST00000537002 PASKQ96RG2 1323 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 PLEKHG3A1L390 1219 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 A6NHS1 94 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 RNF8O76064 485 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 HNRNPCP07910 306 aaKnown RBP eCLIP5.82□□□□□ -1.48
PTPRD-213ENST00000537002 ATP4AP20648 1035 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 DR1Q01658 176 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 TRIP13Q15645 432 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-213ENST00000537002 SGMS1Q86VZ5 419 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 TEKT4Q8WW24 435 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 NUDCD1Q96RS6 583 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 NRDE2Q9H7Z3 1164 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 USP40Q9NVE5 1235 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 DNAJC17Q9NVM6 304 aaKnown RBP5.82□□□□□ -1.48
PTPRD-213ENST00000537002 PALMO75781 387 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 H2AFZP0C0S5 128 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 NR1H3Q13133 447 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 H2AFVQ71UI9 128 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 ATXN2LQ8WWM7 1075 aaKnown RBP5.82□□□□□ -1.48
PTPRD-213ENST00000537002 INPP5DQ92835 1189 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 SLC12A6Q9UHW9 1150 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 ZNF532Q9HCE3 1301 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 LRRC37A3O60309 1634 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 SPECC1L-ADORA2AF8WAN1 911 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 NONOQ15233 471 aaKnown RBP eCLIP5.82□□□□□ -1.48
PTPRD-213ENST00000537002 CCDC80Q76M96 950 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 LONP2Q86WA8 852 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 IFNL2Q8IZJ0 200 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 FLAD1Q8NFF5 587 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 ZNF653Q96CK0 615 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 NR1H4Q96RI1 486 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-213ENST00000537002 XAB2Q9HCS7 855 aaKnown RBP5.82□□□□□ -1.48
PTPRD-213ENST00000537002 LEMD3Q9Y2U8 911 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 PPIP5K2O43314 1243 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 APBA3O96018 575 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 NR5A1Q13285 461 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 ANKRD20A2Q5SQ80 823 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 ANKRD20A1Q5TYW2 823 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 OLFML2BQ68BL8 750 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 PASD1Q8IV76 773 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 IRGQQ8WZA9 623 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 ERGIC2Q96RQ1 377 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 METTL22Q9BUU2 404 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-213ENST00000537002 FBXL5Q9UKA1 691 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 ARL2BPQ9Y2Y0 163 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 DNAJC6O75061 913 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 E2F6O75461 281 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 ZWINTO95229 277 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 CTDNEP1O95476 244 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 GNAT1P11488 350 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 GNA11P29992 359 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 STRN3Q13033 797 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 GCKRQ14397 625 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 TTMPQ5BVD1 217 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 TRIM74Q86UV6 250 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 TRIM73Q86UV7 250 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 SNRNP27Q8WVK2 155 aaKnown RBP5.82□□□□□ -1.48
PTPRD-213ENST00000537002 P2RX5Q93086 422 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 CCDC97Q96F63 343 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-213ENST00000537002 PPCSQ9HAB8 311 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 CNOT7Q9UIV1 285 aaKnown RBP5.82□□□□□ -1.48
PTPRD-213ENST00000537002 PLAGL2Q9UPG8 496 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 FRMD4BQ9Y2L6 1034 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 PNPLA7Q6ZV29 1317 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 KCNQ3O43525 872 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 CD151P48509 253 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 ACADVLP49748 655 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 PHEXP78562 749 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 MDM2Q00987 491 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-213ENST00000537002 TRPC3Q13507 836 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 SNX1Q13596 522 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 CREG2Q8IUH2 290 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms