RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 KCNMB3Q9NPA1 279 aa14.88□□□□□ -0.03
PRKDC-206ENST00000536429 DISC1Q9NRI5 854 aa14.88□□□□□ -0.03
PRKDC-206ENST00000536429 MTMR10Q9NXD2 777 aa14.88□□□□□ -0.03
PRKDC-206ENST00000536429 YBX2Q9Y2T7 364 aaKnown RBP14.88□□□□□ -0.03
PRKDC-206ENST00000536429 SAMM50Q9Y512 469 aa14.88□□□□□ -0.03
PRKDC-206ENST00000536429 PCDHA10Q9Y5I2 948 aa14.88□□□□□ -0.03
PRKDC-206ENST00000536429 SLC4A7Q9Y6M7 1214 aa14.88□□□□□ -0.03
PRKDC-206ENST00000536429 EYSQ5T1H1 3165 aa14.88□□□□□ -0.03
PRKDC-206ENST00000536429 IGSF9BQ9UPX0 1349 aa14.88□□□□□ -0.03
PRKDC-206ENST00000536429 RRN3P2A6NIE6 340 aa14.87□□□□□ -0.03
PRKDC-206ENST00000536429 ATP2A2P16615 1042 aaKnown RBP14.87□□□□□ -0.03
PRKDC-206ENST00000536429 SLC26A2P50443 739 aa14.87□□□□□ -0.03
PRKDC-206ENST00000536429 MGAT3Q09327 533 aa14.87□□□□□ -0.03
PRKDC-206ENST00000536429 FAM26DQ5JW98 314 aa14.87□□□□□ -0.03
PRKDC-206ENST00000536429 ZNF697Q5TEC3 545 aa14.87□□□□□ -0.03
PRKDC-206ENST00000536429 PPP4R3AQ6IN85 833 aa14.87□□□□□ -0.03
PRKDC-206ENST00000536429 TAF2Q6P1X5 1199 aa14.87□□□□□ -0.03
PRKDC-206ENST00000536429 RPAINQ86UA6 219 aa14.87□□□□□ -0.03
PRKDC-206ENST00000536429 POTEDQ86YR6 584 aa14.87□□□□□ -0.03
PRKDC-206ENST00000536429 DBF4BQ8NFT6 615 aa14.87□□□□□ -0.03
PRKDC-206ENST00000536429 HAS1Q92839 578 aa14.87□□□□□ -0.03
PRKDC-206ENST00000536429 TMX3Q96JJ7 454 aa14.87□□□□□ -0.03
PRKDC-206ENST00000536429 FAM49AQ9H0Q0 323 aaPredicted RBP14.87□□□□□ -0.03
PRKDC-206ENST00000536429 MTIF3Q9H2K0 278 aaKnown RBP14.87□□□□□ -0.03
PRKDC-206ENST00000536429 SEMA6BQ9H3T3 888 aa14.87□□□□□ -0.03
PRKDC-206ENST00000536429 BRMS1Q9HCU9 246 aa14.87□□□□□ -0.03
PRKDC-206ENST00000536429 TCEAL9Q9UHQ7 104 aa14.87□□□□□ -0.03
PRKDC-206ENST00000536429 VAV3Q9UKW4 847 aa14.87□□□□□ -0.03
PRKDC-206ENST00000536429 EML1O00423 815 aa14.86□□□□□ -0.03
PRKDC-206ENST00000536429 ST18O60284 1047 aa14.86□□□□□ -0.03
PRKDC-206ENST00000536429 HBP1O60381 514 aa14.86□□□□□ -0.03
PRKDC-206ENST00000536429 CAND2O75155 1236 aa14.86□□□□□ -0.03
PRKDC-206ENST00000536429 PARNO95453 639 aaKnown RBP14.86□□□□□ -0.03
PRKDC-206ENST00000536429 ACTN1P12814 892 aa14.86□□□□□ -0.03
PRKDC-206ENST00000536429 WDR5P61964 334 aaKnown RBP14.86□□□□□ -0.03
PRKDC-206ENST00000536429 DEFB103AP81534 67 aa14.86□□□□□ -0.03
PRKDC-206ENST00000536429 TRIM29Q14134 588 aa14.86□□□□□ -0.03
PRKDC-206ENST00000536429 CNKSR3Q6P9H4 555 aa14.86□□□□□ -0.03
PRKDC-206ENST00000536429 MTHFD1LQ6UB35 978 aa14.86□□□□□ -0.03
PRKDC-206ENST00000536429 CKAP2LQ8IYA6 745 aa14.86□□□□□ -0.03
PRKDC-206ENST00000536429 TIFAQ96CG3 184 aa14.86□□□□□ -0.03
PRKDC-206ENST00000536429 C8orf76Q96K31 380 aa14.86□□□□□ -0.03
PRKDC-206ENST00000536429 PCDHA2Q9Y5H9 948 aa14.86□□□□□ -0.03
PRKDC-206ENST00000536429 ARHGEF15O94989 841 aa14.85□□□□□ -0.03
PRKDC-206ENST00000536429 GHRP10912 638 aa14.85□□□□□ -0.03
PRKDC-206ENST00000536429 GCFC2P16383 781 aaKnown RBP14.85□□□□□ -0.03
PRKDC-206ENST00000536429 KLRC1P26715 233 aa14.85□□□□□ -0.03
PRKDC-206ENST00000536429 JAK3P52333 1124 aa14.85□□□□□ -0.03
PRKDC-206ENST00000536429 HMGN5P82970 282 aaKnown RBP14.85□□□□□ -0.03
PRKDC-206ENST00000536429 TMEM62Q0P6H9 643 aa14.85□□□□□ -0.03
PRKDC-206ENST00000536429 MKRN4PQ13434 485 aaPredicted RBP14.85□□□□□ -0.03
PRKDC-206ENST00000536429 PLEKHG4Q58EX7 1191 aa14.85□□□□□ -0.03
PRKDC-206ENST00000536429 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.85□□□□□ -0.038e-17■■■■□ 26.2
PRKDC-206ENST00000536429 MIER3Q7Z3K6 550 aa14.85□□□□□ -0.03
PRKDC-206ENST00000536429 NKX2-4Q9H2Z4 354 aa14.85□□□□□ -0.03
PRKDC-206ENST00000536429 CDY2AQ9Y6F7 541 aa14.85□□□□□ -0.03
PRKDC-206ENST00000536429 SPTBN5Q9NRC6 3674 aaKnown RBP14.85□□□□□ -0.03
PRKDC-206ENST00000536429 TMEM150BA6NC51 233 aa14.84□□□□□ -0.03
PRKDC-206ENST00000536429 KIF28PB7ZC32 967 aa14.84□□□□□ -0.03
PRKDC-206ENST00000536429 BAIAP3O94812 1187 aa14.84□□□□□ -0.03
PRKDC-206ENST00000536429 STBD1O95210 358 aa14.84□□□□□ -0.03
PRKDC-206ENST00000536429 C22orf31O95567 290 aa14.84□□□□□ -0.03
PRKDC-206ENST00000536429 SFNP31947 248 aa14.84□□□□□ -0.03
PRKDC-206ENST00000536429 MRPS6P82932 125 aaKnown RBP14.84□□□□□ -0.03
PRKDC-206ENST00000536429 PRKCEQ02156 737 aa14.84□□□□□ -0.03
PRKDC-206ENST00000536429 LPIN1Q14693 890 aa14.84□□□□□ -0.03
PRKDC-206ENST00000536429 GRIN2CQ14957 1233 aa14.84□□□□□ -0.03
PRKDC-206ENST00000536429 ZNF484Q5JVG2 852 aa14.84□□□□□ -0.03
PRKDC-206ENST00000536429 FAM184AQ8NB25 1140 aa14.84□□□□□ -0.03
PRKDC-206ENST00000536429 FBXO18Q8NFZ0 1043 aa14.84□□□□□ -0.03
PRKDC-206ENST00000536429 BBXQ8WY36 941 aaPredicted RBP14.84□□□□□ -0.03
PRKDC-206ENST00000536429 SMIM35A0A1B0GVV1 85 aa14.83□□□□□ -0.04
PRKDC-206ENST00000536429 OATP04181 439 aa14.83□□□□□ -0.04
PRKDC-206ENST00000536429 ATP2B1P20020 1258 aa14.83□□□□□ -0.04
PRKDC-206ENST00000536429 SPIRE1Q08AE8 756 aa14.83□□□□□ -0.04
PRKDC-206ENST00000536429 PPP2R5CQ13362 524 aa14.83□□□□□ -0.04
PRKDC-206ENST00000536429 FBXO47Q5MNV8 452 aa14.83□□□□□ -0.04
PRKDC-206ENST00000536429 HERC6Q8IVU3 1022 aa14.83□□□□□ -0.04
PRKDC-206ENST00000536429 KIAA0319LQ8IZA0 1049 aa14.83□□□□□ -0.04
PRKDC-206ENST00000536429 BANK1Q8NDB2 785 aa14.83□□□□□ -0.04
PRKDC-206ENST00000536429 TNPO1Q92973 898 aaKnown RBP14.83□□□□□ -0.04
PRKDC-206ENST00000536429 FAM20AQ96MK3 541 aa14.83□□□□□ -0.04
PRKDC-206ENST00000536429 SLC9A7Q96T83 725 aa14.83□□□□□ -0.04
PRKDC-206ENST00000536429 CDX2Q99626 313 aaPredicted RBP14.83□□□□□ -0.04
PRKDC-206ENST00000536429 SH2D3AQ9BRG2 576 aa14.83□□□□□ -0.04
PRKDC-206ENST00000536429 TMEM60Q9H2L4 133 aa14.83□□□□□ -0.04
PRKDC-206ENST00000536429 ZNF576Q9H609 170 aa14.83□□□□□ -0.04
PRKDC-206ENST00000536429 AGO3Q9H9G7 860 aaKnown RBP14.83□□□□□ -0.04
PRKDC-206ENST00000536429 MSRAQ9UJ68 235 aa14.83□□□□□ -0.04
PRKDC-206ENST00000536429 COL1A2P08123 1366 aa14.83□□□□□ -0.04
PRKDC-206ENST00000536429 ABHD14A-ACY1A0A1B0GW23 586 aa14.82□□□□□ -0.04
PRKDC-206ENST00000536429 KCNJ6P48051 423 aa14.82□□□□□ -0.04
PRKDC-206ENST00000536429 IKBKEQ14164 716 aa14.82□□□□□ -0.04
PRKDC-206ENST00000536429 SAFBQ15424 915 aaKnown RBP eCLIP14.82□□□□□ -0.04
PRKDC-206ENST00000536429 RAB30Q15771 203 aa14.82□□□□□ -0.04
PRKDC-206ENST00000536429 SPRED2Q7Z698 418 aa14.82□□□□□ -0.04
PRKDC-206ENST00000536429 RSPH3Q86UC2 560 aa14.82□□□□□ -0.04
PRKDC-206ENST00000536429 RDM1Q8NG50 284 aa14.82□□□□□ -0.04
PRKDC-206ENST00000536429 PHOSPHO2Q8TCD6 241 aa14.82□□□□□ -0.04
PRKDC-206ENST00000536429 MYLIPQ8WY64 445 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms