RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 NPEPPSP55786 919 aa20.16■□□□□ 0.82
HTATSF1-204ENST00000535601 TRIM14Q14142 442 aa20.16■□□□□ 0.82
HTATSF1-204ENST00000535601 ARHGAP29Q52LW3 1261 aa20.16■□□□□ 0.82
HTATSF1-204ENST00000535601 NAA15Q9BXJ9 866 aaKnown RBP20.16■□□□□ 0.82
HTATSF1-204ENST00000535601 ELP3Q9H9T3 547 aa20.16■□□□□ 0.82
HTATSF1-204ENST00000535601 TUFT1Q9NNX1 390 aa20.16■□□□□ 0.82
HTATSF1-204ENST00000535601 SNCAIPQ9Y6H5 919 aa20.16■□□□□ 0.82
HTATSF1-204ENST00000535601 USO1O60763 962 aaKnown RBP20.16■□□□□ 0.82
HTATSF1-204ENST00000535601 CASQ1P31415 396 aa20.16■□□□□ 0.82
HTATSF1-204ENST00000535601 KNOP1Q1ED39 458 aaKnown RBP20.16■□□□□ 0.82
HTATSF1-204ENST00000535601 TCERG1LQ5VWI1 586 aa20.16■□□□□ 0.82
HTATSF1-204ENST00000535601 REPS2Q8NFH8 660 aa20.16■□□□□ 0.82
HTATSF1-204ENST00000535601 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.16■□□□□ 0.82
HTATSF1-204ENST00000535601 ERGIC2Q96RQ1 377 aa20.16■□□□□ 0.82
HTATSF1-204ENST00000535601 UBIAD1Q9Y5Z9 338 aa20.16■□□□□ 0.82
HTATSF1-204ENST00000535601 ASTN1O14525 1302 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 LRRC53A6NM62 1247 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 AKAP3O75969 853 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 DSG3P32926 999 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 EPHA7Q15375 998 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 ERCC6LQ2NKX8 1250 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 PCNX4Q63HM2 1172 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 B3GNT9Q6UX72 402 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 CCDC51Q96ER9 411 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 SYT17Q9BSW7 474 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 CARD6Q9BX69 1037 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 AFG3L2Q9Y4W6 797 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 DICER1Q9UPY3 1922 aaKnown RBP20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 ARHGEF35A5YM69 484 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 ODR4Q5SWX8 454 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 C9orf131Q5VYM1 1079 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 RDH13Q8NBN7 331 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 OTUD5Q96G74 571 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 JADE2Q9NQC1 790 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 TMOD4Q9NZQ9 345 aa20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.15■□□□□ 0.82
HTATSF1-204ENST00000535601 MYH10P35580 1976 aa20.14■□□□□ 0.82
HTATSF1-204ENST00000535601 SPDYE16A6NNV3 312 aaPredicted RBP20.14■□□□□ 0.82
HTATSF1-204ENST00000535601 HIP1RO75146 1068 aa20.14■□□□□ 0.82
HTATSF1-204ENST00000535601 ARHGAP25P42331 645 aa20.14■□□□□ 0.82
HTATSF1-204ENST00000535601 HERVK_113P62684 666 aa20.14■□□□□ 0.82
HTATSF1-204ENST00000535601 CNTN2Q02246 1040 aa20.14■□□□□ 0.82
HTATSF1-204ENST00000535601 TSR1Q2NL82 804 aaKnown RBP20.14■□□□□ 0.82
HTATSF1-204ENST00000535601 EPM2AIP1Q7L775 607 aaPredicted RBP20.14■□□□□ 0.82
HTATSF1-204ENST00000535601 DAW1Q8N136 415 aa20.14■□□□□ 0.82
HTATSF1-204ENST00000535601 SLC35F6Q8N357 371 aa20.14■□□□□ 0.82
HTATSF1-204ENST00000535601 LSM14BQ9BX40 385 aaKnown RBP20.14■□□□□ 0.82
HTATSF1-204ENST00000535601 NHEJ1Q9H9Q4 299 aaPredicted RBP20.14■□□□□ 0.82
HTATSF1-204ENST00000535601 KIF2AO00139 706 aaPredicted RBP20.14■□□□□ 0.81
HTATSF1-204ENST00000535601 NACC1Q96RE7 527 aa20.14■□□□□ 0.81
HTATSF1-204ENST00000535601 A1CFQ9NQ94 594 aaKnown RBP20.14■□□□□ 0.81
HTATSF1-204ENST00000535601 PADI6Q6TGC4 694 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 GADL1Q6ZQY3 521 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 CATSPERGQ6ZRH7 1159 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 ZMYM2Q9UBW7 1377 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 SLU7O95391 586 aaKnown RBP20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 NR3C2P08235 984 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 FECHP22830 423 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 CYP2J2P51589 502 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 TTLL12Q14166 644 aaPredicted RBP20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 LACRTQ9GZZ8 138 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 PARVGQ9HBI0 331 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 CETN3O15182 167 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 TGFB1I1O43294 461 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 RGS20O76081 388 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 FGFR1OPO95684 399 aaKnown RBP20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 NR3C1P04150 777 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 ZBED6P86452 979 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 DNAAF5Q86Y56 855 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 FAM178BQ8IXR5 827 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 PAGR1Q9BTK6 254 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 CEP350Q5VT06 3117 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 PHLPP2Q6ZVD8 1323 aa20.13■□□□□ 0.81
HTATSF1-204ENST00000535601 ENC1O14682 589 aa20.12■□□□□ 0.81
HTATSF1-204ENST00000535601 IRF6O14896 467 aa20.12■□□□□ 0.81
HTATSF1-204ENST00000535601 ZNF263O14978 683 aa20.12■□□□□ 0.81
HTATSF1-204ENST00000535601 POLR2FP61218 127 aaKnown RBP20.12■□□□□ 0.81
HTATSF1-204ENST00000535601 KCNH2Q12809 1159 aa20.12■□□□□ 0.81
HTATSF1-204ENST00000535601 TRIM59Q8IWR1 403 aa20.12■□□□□ 0.81
HTATSF1-204ENST00000535601 SULF1Q8IWU6 871 aa20.12■□□□□ 0.81
HTATSF1-204ENST00000535601 ZSWIM2Q8NEG5 633 aa20.12■□□□□ 0.81
HTATSF1-204ENST00000535601 FIZ1Q96SL8 496 aa20.12■□□□□ 0.81
HTATSF1-204ENST00000535601 RIT2Q99578 217 aa20.12■□□□□ 0.81
HTATSF1-204ENST00000535601 KIFC3Q9BVG8 833 aa20.12■□□□□ 0.81
HTATSF1-204ENST00000535601 ARHGAP20Q9P2F6 1191 aa20.12■□□□□ 0.81
HTATSF1-204ENST00000535601 TCEAL9Q9UHQ7 104 aa20.12■□□□□ 0.81
HTATSF1-204ENST00000535601 SLC9A1P19634 815 aa20.12■□□□□ 0.81
HTATSF1-204ENST00000535601 SUPT20HL1Q3ZLR7 823 aa20.12■□□□□ 0.81
HTATSF1-204ENST00000535601 DCPSQ96C86 337 aaKnown RBP20.12■□□□□ 0.81
HTATSF1-204ENST00000535601 GTPBP4Q9BZE4 634 aaKnown RBP20.12■□□□□ 0.81
HTATSF1-204ENST00000535601 BRCA2P51587 3418 aa20.12■□□□□ 0.81
HTATSF1-204ENST00000535601 BACH1O14867 736 aa20.11■□□□□ 0.81
HTATSF1-204ENST00000535601 NOL4O94818 638 aa20.11■□□□□ 0.81
HTATSF1-204ENST00000535601 CACNA2D4Q7Z3S7 1137 aa20.11■□□□□ 0.81
HTATSF1-204ENST00000535601 PCIF1Q9H4Z3 704 aa20.11■□□□□ 0.81
HTATSF1-204ENST00000535601 L2HGDHQ9H9P8 463 aa20.11■□□□□ 0.81
HTATSF1-204ENST00000535601 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.11■□□□□ 0.813e-10■■■■■ 153.8
HTATSF1-204ENST00000535601 PNMA6AP0CW24 399 aaPredicted RBP20.11■□□□□ 0.81
HTATSF1-204ENST00000535601 MAPK7Q13164 816 aa20.11■□□□□ 0.81
HTATSF1-204ENST00000535601 EEPD1Q7L9B9 569 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms