RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 MEI1Q5TIA1 1274 aa17.31■□□□□ 0.36
MCF2L-232ENST00000535094 HOOK3Q86VS8 718 aa17.31■□□□□ 0.36
MCF2L-232ENST00000535094 GDF3Q9NR23 364 aa17.31■□□□□ 0.36
MCF2L-232ENST00000535094 SWAP70Q9UH65 585 aa17.31■□□□□ 0.36
MCF2L-232ENST00000535094 SCNN1DP51172 638 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 MESDQ14696 234 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 TPH2Q8IWU9 490 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 ERMNQ8TAM6 284 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 PBKQ96KB5 322 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 NT5C3AQ9H0P0 336 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 TMBIM4Q9HC24 238 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 OSGEPQ9NPF4 335 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 USP17L10C9JJH3 530 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 RFC4P35249 363 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 ZNF746Q6NUN9 644 aaPredicted RBP17.3■□□□□ 0.36
MCF2L-232ENST00000535094 LRRC55Q6ZSA7 311 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 PIGOQ8TEQ8 1089 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 ISCUQ9H1K1 167 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 BHMT2Q9H2M3 363 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 AZI2Q9H6S1 392 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 PCDHA1Q9Y5I3 950 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 C4AP0C0L4 1744 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 C4BP0C0L5 1744 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 CAMTA1Q9Y6Y1 1673 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 SPOPO43791 374 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 SLURP2P0DP57 97 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 RPL13P26373 211 aaKnown RBP17.3■□□□□ 0.36
MCF2L-232ENST00000535094 DR1Q01658 176 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 ZNF844Q08AG5 666 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 EP400NLQ6ZTU2 488 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 RASAL2Q9UJF2 1139 aa17.3■□□□□ 0.36
MCF2L-232ENST00000535094 UBXN2AP68543 259 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 GTF2IP78347 998 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 MYO1EQ12965 1108 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 SBK1Q52WX2 424 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 HGSNATQ68CP4 663 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 CYB5D1Q6P9G0 228 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 MTRF1LQ9UGC7 380 aaKnown RBP17.29■□□□□ 0.36
MCF2L-232ENST00000535094 MYH6P13533 1939 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 ECM1Q16610 540 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 PHLDB2Q86SQ0 1253 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 GDAP1Q8TB36 358 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 RAB17Q9H0T7 212 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 TBK1Q9UHD2 729 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 ZBTB21Q9ULJ3 1066 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 SUFUQ9UMX1 484 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 NID2Q14112 1375 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 ZNF335Q9H4Z2 1342 aaPredicted RBP17.29■□□□□ 0.36
MCF2L-232ENST00000535094 SCP2P22307 547 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 ITGB3BPQ13352 177 aaPredicted RBP17.29■□□□□ 0.36
MCF2L-232ENST00000535094 SNX1Q13596 522 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 NFIXQ14938 502 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 TRIP13Q15645 432 aaPredicted RBP17.29■□□□□ 0.36
MCF2L-232ENST00000535094 CNPY4Q8N129 248 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 PRPF38AQ8NAV1 312 aaKnown RBP17.29■□□□□ 0.36
MCF2L-232ENST00000535094 TMX4Q9H1E5 349 aaPredicted RBP17.29■□□□□ 0.36
MCF2L-232ENST00000535094 NEUROG2Q9H2A3 272 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 NAGPAQ9UK23 515 aa17.29■□□□□ 0.36
MCF2L-232ENST00000535094 SPEF2Q9C093 1822 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 CAND2O75155 1236 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 ACSL3O95573 720 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 CPP00450 1065 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 FGFR4P22455 802 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 CASP4P49662 377 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 PSMD2Q13200 908 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 SYCE1Q8N0S2 351 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 VCPKMTQ9H867 229 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 CALUO43852 315 aaPredicted RBP17.28■□□□□ 0.36
MCF2L-232ENST00000535094 GALCP54803 685 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 FAM98CQ17RN3 349 aaKnown RBP17.28■□□□□ 0.36
MCF2L-232ENST00000535094 ZNF662Q6ZS27 426 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 PROM2Q8N271 834 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 MICAL1Q8TDZ2 1067 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 RSRC1Q96IZ7 334 aaKnown RBP17.28■□□□□ 0.36
MCF2L-232ENST00000535094 LEMD3Q9Y2U8 911 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 A0A1B0GUA9 196 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 TRIM49P0CI25 452 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 TRIM49CP0CI26 452 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 CHN1P15882 459 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 USP11P51784 963 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 ITIH3Q06033 890 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 HS2ST1Q7LGA3 356 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 ZKSCAN4Q969J2 545 aaPredicted RBP17.28■□□□□ 0.36
MCF2L-232ENST00000535094 INPP4AQ96PE3 977 aaPredicted RBP17.28■□□□□ 0.36
MCF2L-232ENST00000535094 TAOK3Q9H2K8 898 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 ASIC3Q9UHC3 531 aa17.28■□□□□ 0.36
MCF2L-232ENST00000535094 DBR1Q9UK59 544 aaKnown RBP17.28■□□□□ 0.36
MCF2L-232ENST00000535094 DDX39AO00148 427 aaKnown RBP17.27■□□□□ 0.36
MCF2L-232ENST00000535094 SKAP2O75563 359 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-232ENST00000535094 SPZ1Q9BXG8 430 aa17.27■□□□□ 0.36
MCF2L-232ENST00000535094 NYXQ9GZU5 481 aa17.27■□□□□ 0.36
MCF2L-232ENST00000535094 IKZF4Q9H2S9 585 aa17.27■□□□□ 0.36
MCF2L-232ENST00000535094 YY1AP1Q9H869 796 aa17.27■□□□□ 0.36
MCF2L-232ENST00000535094 MYBP10242 640 aa17.27■□□□□ 0.36
MCF2L-232ENST00000535094 AKR1B1P15121 316 aa17.27■□□□□ 0.36
MCF2L-232ENST00000535094 BIRC3Q13489 604 aa17.27■□□□□ 0.36
MCF2L-232ENST00000535094 PPP2R5AQ15172 486 aa17.27■□□□□ 0.36
MCF2L-232ENST00000535094 CAPN12Q6ZSI9 719 aa17.27■□□□□ 0.36
MCF2L-232ENST00000535094 NEK9Q8TD19 979 aa17.27■□□□□ 0.36
MCF2L-232ENST00000535094 CHMP6Q96FZ7 201 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms