RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 RABGGTAQ92696 567 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 SKA1Q96BD8 255 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 TBC1D20Q96BZ9 403 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 GIMAP5Q96F15 307 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 TMEM87BQ96K49 555 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 MEGF10Q96KG7 1140 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 SAMD11Q96NU1 681 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 TRAPPC9Q96Q05 1148 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 SPZ1Q9BXG8 430 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 LACRTQ9GZZ8 138 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 GBP3Q9H0R5 595 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 CENPHQ9H3R5 247 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 VCX3AQ9NNX9 186 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 ARFGAP3Q9NP61 516 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 CD93Q9NPY3 652 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 CCDC87Q9NVE4 849 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 KCTD5Q9NXV2 234 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 NDUFA13Q9P0J0 144 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 ATPIF1Q9UII2 106 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 HERC5Q9UII4 1024 aaKnown RBP5.71□□□□□ -1.5
SNHG1-201ENST00000535076 SALL4Q9UJQ4 1053 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 USTQ9Y2C2 406 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 EFR3BQ9Y2G0 817 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 RABGAP1Q9Y3P9 1069 aa5.71□□□□□ -1.5
SNHG1-201ENST00000535076 GOLGA6L7A0A1B0GV03 622 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 CCDC151A5D8V7 595 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 NFKBIEO00221 500 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 MCF2LO15068 1137 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 TEX28O15482 410 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 ORC4O43929 436 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 NMT2O60551 498 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 CDC45O75419 566 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 GFPT2O94808 682 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 BAIAP3O94812 1187 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 ALX3O95076 343 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 WISP1O95388 367 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 UBL4AP11441 157 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 CPA3P15088 417 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 RPS2P15880 293 aaKnown RBP5.7□□□□□ -1.5
SNHG1-201ENST00000535076 MZF1P28698 734 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-201ENST00000535076 ALDH3A1P30838 453 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 ZNF76P36508 570 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 LIFRP42702 1097 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 ACADSBP45954 432 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 SERPINB4P48594 390 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 LIG3P49916 1009 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 SERPINB8P50452 374 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 CCNG1P51959 295 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 BLVRAP53004 296 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 AP2B1P63010 937 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 AKAP17AQ02040 695 aaKnown RBP5.7□□□□□ -1.5
SNHG1-201ENST00000535076 GSTM4Q03013 218 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 STK3Q13188 491 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 RIPK1Q13546 671 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 ITGA7Q13683 1181 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 SIM2Q14190 667 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-201ENST00000535076 NONOQ15233 471 aaKnown RBP eCLIP5.7□□□□□ -1.5
SNHG1-201ENST00000535076 ANKRD39Q53RE8 183 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 ARMC4Q5T2S8 1044 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 TWF2Q6IBS0 349 aaKnown RBP5.7□□□□□ -1.5
SNHG1-201ENST00000535076 PDE12Q6L8Q7 609 aaKnown RBP5.7□□□□□ -1.5
SNHG1-201ENST00000535076 INTS8Q75QN2 995 aaKnown RBP5.7□□□□□ -1.5
SNHG1-201ENST00000535076 ZNF438Q7Z4V0 828 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 TMEM151BQ8IW70 566 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 CCDC13Q8IYE1 715 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 ARHGAP18Q8N392 663 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.7□□□□□ -1.55e-11■■□□□ 12.1
SNHG1-201ENST00000535076 SCAIQ8N9R8 606 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 LEO1Q8WVC0 666 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-201ENST00000535076 WFDC12Q8WWY7 111 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 P3H4Q92791 437 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 ARHGEF2Q92974 986 aaKnown RBP5.7□□□□□ -1.5
SNHG1-201ENST00000535076 NRBF2Q96F24 287 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 PSKH2Q96QS6 385 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 KCNF1Q9H3M0 494 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 VCPKMTQ9H867 229 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 SH2B1Q9NRF2 756 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-201ENST00000535076 AATFQ9NY61 560 aaKnown RBP eCLIP5.7□□□□□ -1.51e-323■■■□□ 18.6
SNHG1-201ENST00000535076 KCNK4Q9NYG8 393 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 ORC3Q9UBD5 711 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-201ENST00000535076 USP21Q9UK80 565 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 PYCARDQ9ULZ3 195 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 FNDC3AQ9Y2H6 1198 aaKnown RBP5.7□□□□□ -1.5
SNHG1-201ENST00000535076 CD2APQ9Y5K6 639 aa5.7□□□□□ -1.5
SNHG1-201ENST00000535076 ABCA10Q8WWZ4 1543 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 NCOA1Q15788 1441 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 VPS8Q8N3P4 1428 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 ERBINQ96RT1 1412 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 ARPC4-TTLL3A0A0A6YYG9 625 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 DYTNA2CJ06 578 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 LINC01387J3KSC0 135 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 YKT6O15498 198 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 ASAP2O43150 1006 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 KCNJ13O60928 360 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 ZC3H11AO75152 810 aaKnown RBP eCLIP5.69□□□□□ -1.51e-6■■□□□ 11.7
SNHG1-201ENST00000535076 SMIM24O75264 130 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 TADA3O75528 432 aa5.69□□□□□ -1.5
SNHG1-201ENST00000535076 LDHAP00338 332 aaKnown RBP5.69□□□□□ -1.5
SNHG1-201ENST00000535076 S100BP04271 92 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-201ENST00000535076 LDHBP07195 334 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms