RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 UTP14CQ5TAP6 766 aaKnown RBP22.58■■□□□ 1.21
TNFRSF1A-205ENST00000534885 GTPBP4Q9BZE4 634 aaKnown RBP22.58■■□□□ 1.21
TNFRSF1A-205ENST00000534885 PDGFCQ9NRA1 345 aa22.58■■□□□ 1.21
TNFRSF1A-205ENST00000534885 DDX41Q9UJV9 622 aaKnown RBP22.58■■□□□ 1.21
TNFRSF1A-205ENST00000534885 PCDHA2Q9Y5H9 948 aa22.58■■□□□ 1.21
TNFRSF1A-205ENST00000534885 SYNGAP1Q96PV0 1343 aa22.58■■□□□ 1.21
TNFRSF1A-205ENST00000534885 ZNF236Q9UL36 1845 aa22.58■■□□□ 1.2
TNFRSF1A-205ENST00000534885 ZNF18P17022 549 aa22.58■■□□□ 1.2
TNFRSF1A-205ENST00000534885 RARRES1P49788 294 aa22.58■■□□□ 1.2
TNFRSF1A-205ENST00000534885 NEDD9Q14511 834 aa22.58■■□□□ 1.2
TNFRSF1A-205ENST00000534885 LRRC41Q15345 812 aa22.58■■□□□ 1.2
TNFRSF1A-205ENST00000534885 COBLL1Q53SF7 1204 aa22.58■■□□□ 1.2
TNFRSF1A-205ENST00000534885 TMEM63BQ5T3F8 832 aa22.58■■□□□ 1.2
TNFRSF1A-205ENST00000534885 ZFYVE28Q9HCC9 887 aa22.58■■□□□ 1.2
TNFRSF1A-205ENST00000534885 DBR1Q9UK59 544 aaKnown RBP22.58■■□□□ 1.2
TNFRSF1A-205ENST00000534885 SUPT20HL2P0C7V6 817 aa22.57■■□□□ 1.2
TNFRSF1A-205ENST00000534885 MIS18BP1Q6P0N0 1132 aa22.57■■□□□ 1.2
TNFRSF1A-205ENST00000534885 MAML3Q96JK9 1138 aa22.57■■□□□ 1.2
TNFRSF1A-205ENST00000534885 ATG7O95352 703 aa22.56■■□□□ 1.2
TNFRSF1A-205ENST00000534885 PLA2G4FQ68DD2 849 aa22.56■■□□□ 1.2
TNFRSF1A-205ENST00000534885 CCDC62Q6P9F0 684 aa22.56■■□□□ 1.2
TNFRSF1A-205ENST00000534885 ZNF467Q7Z7K2 595 aaPredicted RBP22.56■■□□□ 1.2
TNFRSF1A-205ENST00000534885 SFR1Q86XK3 245 aa22.56■■□□□ 1.2
TNFRSF1A-205ENST00000534885 ATP6V0A1Q93050 837 aa22.56■■□□□ 1.2
TNFRSF1A-205ENST00000534885 DHTKD1Q96HY7 919 aaPredicted RBP22.56■■□□□ 1.2
TNFRSF1A-205ENST00000534885 MYH11P35749 1972 aa22.56■■□□□ 1.2
TNFRSF1A-205ENST00000534885 SLC15A5A6NIM6 579 aa22.56■■□□□ 1.2
TNFRSF1A-205ENST00000534885 SFI1A8K8P3 1242 aa22.56■■□□□ 1.2
TNFRSF1A-205ENST00000534885 FANCCQ00597 558 aa22.56■■□□□ 1.2
TNFRSF1A-205ENST00000534885 KCNV1Q6PIU1 500 aa22.56■■□□□ 1.2
TNFRSF1A-205ENST00000534885 PADI6Q6TGC4 694 aa22.56■■□□□ 1.2
TNFRSF1A-205ENST00000534885 METTL7BQ6UX53 244 aa22.56■■□□□ 1.2
TNFRSF1A-205ENST00000534885 ANO5Q75V66 913 aa22.56■■□□□ 1.2
TNFRSF1A-205ENST00000534885 NPLOC4Q8TAT6 608 aa22.56■■□□□ 1.2
TNFRSF1A-205ENST00000534885 IGSF9BQ9UPX0 1349 aa22.55■■□□□ 1.2
TNFRSF1A-205ENST00000534885 BACH1O14867 736 aa22.55■■□□□ 1.2
TNFRSF1A-205ENST00000534885 TBCAO75347 108 aaKnown RBP22.55■■□□□ 1.2
TNFRSF1A-205ENST00000534885 NPEPPSP55786 919 aa22.55■■□□□ 1.2
TNFRSF1A-205ENST00000534885 TTI2Q6NXR4 508 aa22.55■■□□□ 1.2
TNFRSF1A-205ENST00000534885 GUF1Q8N442 669 aaKnown RBP22.55■■□□□ 1.2
TNFRSF1A-205ENST00000534885 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.55■■□□□ 1.2
TNFRSF1A-205ENST00000534885 KCND2Q9NZV8 630 aa22.55■■□□□ 1.2
TNFRSF1A-205ENST00000534885 IFNKQ9P0W0 207 aa22.55■■□□□ 1.2
TNFRSF1A-205ENST00000534885 GSTTP1A0A1W2PQM5 241 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 STBD1O95210 358 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 PTGS1P23219 599 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 PPP1R2P41236 205 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 TPD52L1Q16890 204 aaPredicted RBP22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 MORN1Q5T089 497 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 MAMDC4Q6UXC1 1216 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 ZNF784Q8NCA9 323 aaPredicted RBP22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 COPS5Q92905 334 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 P2RX5Q93086 422 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 MLXIPQ9HAP2 919 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 DIS3Q9Y2L1 958 aaKnown RBP22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 AOC2O75106 756 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 SNAI1O95863 264 aaPredicted RBP22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 TXNP10599 105 aaKnown RBP22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 CCNE1P24864 410 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 GUCY2CP25092 1073 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 CASP5P51878 434 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 CELF3Q5SZQ8 465 aaKnown RBP22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 CDKAL1Q5VV42 579 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 TAPT1Q6NXT6 567 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 UBE2Q2Q8WVN8 375 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 CCDC43Q96MW1 224 aaKnown RBP22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 XPO4Q9C0E2 1151 aaKnown RBP22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 SEMA6BQ9H3T3 888 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 COL4A3BPQ9Y5P4 624 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 ARID2Q68CP9 1835 aa22.54■■□□□ 1.2
TNFRSF1A-205ENST00000534885 USO1O60763 962 aaKnown RBP22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 FAM13AO94988 1023 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 PRKCEQ02156 737 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 HSDL1Q3SXM5 330 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 XKR9Q5GH70 373 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 ANKRD40Q6AI12 368 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 SCFD2Q8WU76 684 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 KATNBL1Q9H079 304 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 ANKEF1Q9NU02 776 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 IGKV6D-21A0A0A0MT36 114 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 CA12O43570 354 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 CDK11BP21127 795 aaKnown RBP22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 MAPK7Q13164 816 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 NOGQ13253 232 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 TTLL4Q14679 1199 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 MAEAQ7L5Y9 396 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 MYOCDQ8IZQ8 938 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 DAW1Q8N136 415 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 SPC24Q8NBT2 197 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 MRFAP1L1Q96HT8 127 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 TRIM47Q96LD4 638 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 PCYT2Q99447 389 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 DUSP9Q99956 384 aaKnown RBP22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 VTA1Q9NP79 307 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 ZNF302Q9NR11 478 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 ODF2LQ9ULJ1 636 aa22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 MAFBQ9Y5Q3 323 aaPredicted RBP22.53■■□□□ 1.2
TNFRSF1A-205ENST00000534885 DKC1O60832 514 aaKnown RBP eCLIP22.52■■□□□ 1.2
TNFRSF1A-205ENST00000534885 HIP1RO75146 1068 aa22.52■■□□□ 1.2
TNFRSF1A-205ENST00000534885 SERPINC1P01008 464 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms