RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 NDUFV1P49821 464 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 PLEKHG4Q58EX7 1191 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 FAM26DQ5JW98 314 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 PPP1R18Q6NYC8 613 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 ASCL5Q7RTU5 278 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 HEATR3Q7Z4Q2 680 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 TRIM50Q86XT4 487 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 ZNF713Q8N859 430 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 SEPT1Q8WYJ6 367 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 TOP1MTQ969P6 601 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 MXRA8Q9BRK3 442 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 ALG13Q9NP73 1137 aaKnown RBP11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 SETD4Q9NVD3 440 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 BARHL2Q9NY43 387 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 SNX14Q9Y5W7 946 aa11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 V9GY48 417 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-203ENST00000534830 KLF18A0A0U1RQI7 1052 aa11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 GRM6O15303 877 aa11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 FOSP01100 380 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 GNAT1P11488 350 aa11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 CPA1P15085 419 aa11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 ADD1P35611 737 aaKnown RBP11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 TCF7P36402 384 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 ID4P47928 161 aa11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 SIGLEC14Q08ET2 396 aa11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 MTMR1Q13613 665 aa11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 UTP14CQ5TAP6 766 aaKnown RBP11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 CYP2W1Q8TAV3 490 aa11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 LMBR1Q8WVP7 490 aa11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 CRYGNQ8WXF5 182 aa11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 SEPT8Q92599 483 aa11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 PCYT2Q99447 389 aa11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 C11orf84Q9BUA3 381 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 IFIH1Q9BYX4 1025 aaKnown RBP11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 ZNF215Q9UL58 517 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 TRPC6Q9Y210 931 aa11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 NRCAMQ92823 1304 aa11.51□□□□□ -0.57
CLSTN3-203ENST00000534830 DCHS1Q96JQ0 3298 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 MBLAC1A4D2B0 266 aaPredicted RBP11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 SMCO2A6NFE2 343 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 GOLGA8AA7E2F4 631 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 GOLGA8BA8MQT2 603 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 PROB1E7EW31 1015 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 MEIS1O00470 390 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 EPB41L2O43491 1005 aaKnown RBP11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 ATG7O95352 703 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 RB1P06400 928 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 SREBF1P36956 1147 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 NAPAP54920 295 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 EVCP57679 992 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 APOBRQ0VD83 1088 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 PFKFB3Q16875 520 aaPredicted RBP11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 Q6ZUG5 572 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 FIBCD1Q8N539 461 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 IL17RAQ96F46 866 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 CCDC136Q96JN2 1154 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 LMAN2LQ9H0V9 348 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 GLT8D2Q9H1C3 349 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 EHMT1Q9H9B1 1298 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 KCNH7Q9NS40 1196 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 NFASCO94856 1347 aa11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 MYH9P35579 1960 aaKnown RBP11.5□□□□□ -0.57
CLSTN3-203ENST00000534830 COL4A6Q14031 1691 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 EVPLQ92817 2033 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 ESYT2A0FGR8 921 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 PRR23AA6NEV1 266 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 LOC730098B7Z3J9 87 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 ADAMTS3O15072 1205 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 EYA4O95677 639 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 CHRNA1P02708 482 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 ARP10275 920 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 BMPR1AP36894 532 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 METAP2P50579 478 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 ADCY7P51828 1080 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 SP4Q02446 784 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 MGAT3Q09327 533 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 AP3B2Q13367 1082 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 ADAM15Q13444 863 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 NTRK3Q16288 839 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 CEP55Q53EZ4 464 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 MARCH8Q5T0T0 291 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 NIPA1Q7RTP0 329 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 ASIC4Q96FT7 647 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 PGBD1Q96JS3 809 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 MSLNLQ96KJ4 702 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 RPGRIP1Q96KN7 1286 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 JAKMIP1Q96N16 626 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 ANO3Q9BYT9 981 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 ZMYND12Q9H0C1 365 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 SMARCAD1Q9H4L7 1026 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 ERAP1Q9NZ08 941 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 SLC9A2Q9UBY0 812 aa11.49□□□□□ -0.57
CLSTN3-203ENST00000534830 TTC3P53804 2025 aa11.48□□□□□ -0.57
CLSTN3-203ENST00000534830 IGKV6D-21A0A0A0MT36 114 aa11.48□□□□□ -0.57
CLSTN3-203ENST00000534830 CCDC196A0A1B0GTZ2 297 aa11.48□□□□□ -0.57
CLSTN3-203ENST00000534830 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.48□□□□□ -0.57
CLSTN3-203ENST00000534830 C5orf67F2Z3F1 127 aa11.48□□□□□ -0.57
CLSTN3-203ENST00000534830 PRPF3O43395 683 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-203ENST00000534830 CYP3A4P08684 503 aa11.48□□□□□ -0.57
CLSTN3-203ENST00000534830 SCG2P13521 617 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms