RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 IL23AQ9NPF7 189 aa10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 BARHL2Q9NY43 387 aa10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 TELO2Q9Y4R8 837 aa10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 RBAK-RBAKDNI3L0D1 243 aa10.2□□□□□ -0.78
CCDC90B-219ENST00000534753 DTNBO60941 627 aa10.2□□□□□ -0.78
CCDC90B-219ENST00000534753 ATP9AO75110 1047 aa10.2□□□□□ -0.78
CCDC90B-219ENST00000534753 PPFIA4O75335 1185 aa10.2□□□□□ -0.78
CCDC90B-219ENST00000534753 FGBP02675 491 aa10.2□□□□□ -0.78
CCDC90B-219ENST00000534753 SKIP12755 728 aa10.2□□□□□ -0.78
CCDC90B-219ENST00000534753 ZNF200P98182 395 aaPredicted RBP10.2□□□□□ -0.78
CCDC90B-219ENST00000534753 MTMR1Q13613 665 aa10.2□□□□□ -0.78
CCDC90B-219ENST00000534753 FRMPD4Q14CM0 1322 aa10.2□□□□□ -0.78
CCDC90B-219ENST00000534753 PFKFB3Q16875 520 aaPredicted RBP10.2□□□□□ -0.78
CCDC90B-219ENST00000534753 TMEM240Q5SV17 173 aa10.2□□□□□ -0.78
CCDC90B-219ENST00000534753 PPP1R18Q6NYC8 613 aa10.2□□□□□ -0.78
CCDC90B-219ENST00000534753 XRRA1Q6P2D8 792 aa10.2□□□□□ -0.78
CCDC90B-219ENST00000534753 TRIM50Q86XT4 487 aa10.2□□□□□ -0.78
CCDC90B-219ENST00000534753 ANO3Q9BYT9 981 aa10.2□□□□□ -0.78
CCDC90B-219ENST00000534753 C6orf50Q9HD87 102 aa10.2□□□□□ -0.78
CCDC90B-219ENST00000534753 GRXCR1A8MXD5 290 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 H3BRB1 525 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 hCG_1984214I3L0E3 225 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 DDX39AO00148 427 aaKnown RBP10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 ADAMTS3O15072 1205 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 PRPF3O43395 683 aaKnown RBP10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 LGALS2P05162 132 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 ITGB5P18084 799 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 ICAM3P32942 547 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 RCAN1P53805 252 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 PTPN11Q06124 597 aaPredicted RBP10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 SSRP1Q08945 709 aaKnown RBP10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 BFSP2Q13515 415 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 ZNF697Q5TEC3 545 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 FAM109BQ6ICB4 259 aaPredicted RBP10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 PSRC1Q6PGN9 363 aaPredicted RBP10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 METTL7BQ6UX53 244 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 TRIM22Q8IYM9 498 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 RPUSD2Q8IZ73 545 aaKnown RBP10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 CCDC155Q8N6L0 562 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 ZNF713Q8N859 430 aaPredicted RBP10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 CYP2W1Q8TAV3 490 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 RASGRP4Q8TDF6 673 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 CCDC12Q8WUD4 166 aaPredicted RBP10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 GPRASP2Q96D09 838 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 GPR20Q99678 358 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 TM6SF1Q9BZW5 370 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 TUT1Q9H6E5 874 aaKnown RBP10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 VPS54Q9P1Q0 977 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 GTF2IRD1Q9UHL9 959 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 DOCK5Q9H7D0 1870 aa10.19□□□□□ -0.78
CCDC90B-219ENST00000534753 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 C17orf102A2RUQ5 167 aa10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 EPB41L2O43491 1005 aaKnown RBP10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 F2P00734 622 aa10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 FOSP01100 380 aaPredicted RBP10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 SMIM10L2AP0DMW4 78 aa10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 SMIM10L2BP0DMW5 78 aa10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 ARP10275 920 aa10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 MARK3P27448 753 aa10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 TCF7P36402 384 aaPredicted RBP10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 NLRP5P59047 1200 aa10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 PKN1Q16512 942 aa10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 C4orf48Q5BLP8 95 aa10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 REXO1Q8N1G1 1221 aaKnown RBP10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 GIMAP8Q8ND71 665 aaPredicted RBP10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 GLG1Q92896 1179 aa10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 CDHR1Q96JP9 859 aa10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 MXRA8Q9BRK3 442 aa10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 C16orf70Q9BSU1 422 aa10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 AGXT2Q9BYV1 514 aa10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 GLT8D2Q9H1C3 349 aa10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 MTIF3Q9H2K0 278 aaKnown RBP10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 JADE2Q9NQC1 790 aa10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 CXXC1Q9P0U4 656 aaPredicted RBP10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 ZNF215Q9UL58 517 aaPredicted RBP10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 GPSM3Q9Y4H4 160 aa10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 UBIAD1Q9Y5Z9 338 aa10.18□□□□□ -0.78
CCDC90B-219ENST00000534753 IQCF3P0C7M6 154 aa10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 KCNA2P16389 499 aa10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 IFNAR1P17181 557 aa10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 THPOP40225 353 aa10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 ARHGAP4P98171 946 aa10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 NTRK3Q16288 839 aa10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 CPLX2Q6PUV4 134 aaKnown RBP10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 ZBTB33Q86T24 672 aa10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 FBXL16Q8N461 479 aa10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 CCDC148Q8NFR7 591 aa10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 ATP6V0A1Q93050 837 aa10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 ZNF274Q96GC6 653 aaPredicted RBP10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 SENP7Q9BQF6 1050 aa10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 SDF4Q9BRK5 362 aa10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 RNF26Q9BY78 433 aaPredicted RBP10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 SLKQ9H2G2 1235 aaPredicted RBP10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 KCNH7Q9NS40 1196 aa10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 SETD4Q9NVD3 440 aa10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 SLC4A7Q9Y6M7 1214 aa10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 SCN10AQ9Y5Y9 1956 aa10.17□□□□□ -0.78
CCDC90B-219ENST00000534753 HAS3O00219 553 aa10.16□□□□□ -0.78
CCDC90B-219ENST00000534753 TREHO43280 583 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms