RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 GOLGA8AA7E2F4 631 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 M0R082 166 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 MARCH6O60337 910 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 WDHD1O75717 1129 aaPredicted RBP6.59□□□□□ -1.35
CHKA-208ENST00000533910 CDKL5O76039 1030 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 FDPSP14324 419 aaKnown RBP6.59□□□□□ -1.35
CHKA-208ENST00000533910 MAOBP27338 520 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 EIF6P56537 245 aaKnown RBP6.59□□□□□ -1.35
CHKA-208ENST00000533910 CCT2P78371 535 aaKnown RBP6.59□□□□□ -1.35
CHKA-208ENST00000533910 RESTQ13127 1097 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 SERINC3Q13530 473 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 R3HDM1Q15032 1099 aaKnown RBP6.59□□□□□ -1.35
CHKA-208ENST00000533910 LRRC14Q15048 493 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 NTRK3Q16288 839 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 APOBEC3HQ6NTF7 200 aaKnown RBP6.59□□□□□ -1.35
CHKA-208ENST00000533910 C16orf86Q6ZW13 317 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 MICU3Q86XE3 530 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 IQCA1Q86XH1 822 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 MAPKAPK5Q8IW41 473 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 ENAHQ8N8S7 591 aaPredicted RBP6.59□□□□□ -1.35
CHKA-208ENST00000533910 ZNF417Q8TAU3 575 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 TTC9Q92623 222 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 ANKS1AQ92625 1134 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 ZNF587Q96SQ5 575 aaPredicted RBP6.59□□□□□ -1.35
CHKA-208ENST00000533910 UBAC1Q9BSL1 405 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 LRRC3Q9BY71 257 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 CCDC86Q9H6F5 360 aaKnown RBP6.59□□□□□ -1.35
CHKA-208ENST00000533910 TOMM22Q9NS69 142 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 LMBRD1Q9NUN5 540 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 PIM2Q9P1W9 311 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 PCDHA4Q9UN74 947 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 PCDHB14Q9Y5E9 798 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 CSADQ9Y600 493 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 SLC12A7Q9Y666 1083 aa6.59□□□□□ -1.35
CHKA-208ENST00000533910 ATRNL1Q5VV63 1379 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 MYH4Q9Y623 1939 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 A0A0U1RQG5 324 aaPredicted RBP6.58□□□□□ -1.36
CHKA-208ENST00000533910 ERICH2A1L162 156 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 CCDC69A6NI79 296 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 C1QTNF9BB2RNN3 333 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 F8W031 263 aaPredicted RBP6.58□□□□□ -1.36
CHKA-208ENST00000533910 CPLX1O14810 134 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 FSCN2O14926 492 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 RANBP6O60518 1105 aaKnown RBP6.58□□□□□ -1.36
CHKA-208ENST00000533910 DTNBO60941 627 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 PRDM1O75626 825 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 DDAH1O94760 285 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 BPNT1O95861 308 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 IFNAR1P17181 557 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 LIG1P18858 919 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 NOVP48745 357 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 PLCD1P51178 756 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 NLRP12P59046 1061 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 GABPAQ06546 454 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 TROAPQ12815 778 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 PPP2R5BQ15173 497 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 KLHL40Q2TBA0 621 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 SKOR2Q2VWA4 1001 aaPredicted RBP6.58□□□□□ -1.36
CHKA-208ENST00000533910 DALRD3Q5D0E6 543 aaKnown RBP6.58□□□□□ -1.36
CHKA-208ENST00000533910 MCTP1Q6DN14 999 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 RCSD1Q6JBY9 416 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 CDC42EP5Q6NZY7 148 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 CPLX2Q6PUV4 134 aaKnown RBP6.58□□□□□ -1.36
CHKA-208ENST00000533910 NFXL1Q6ZNB6 911 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 CCDC84Q86UT8 332 aaPredicted RBP6.58□□□□□ -1.36
CHKA-208ENST00000533910 FAM184AQ8NB25 1140 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 GALNT11Q8NCW6 608 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 MICAL1Q8TDZ2 1067 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 DDX11Q96FC9 970 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 CHAMP1Q96JM3 812 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 MYL10Q9BUA6 226 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 IDI2Q9BXS1 227 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 EMILIN2Q9BXX0 1053 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 TRIM55Q9BYV6 548 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 OSBPL5Q9H0X9 879 aaPredicted RBP6.58□□□□□ -1.36
CHKA-208ENST00000533910 ZNF287Q9HBT7 754 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 DDX4Q9NQI0 724 aaKnown RBP6.58□□□□□ -1.36
CHKA-208ENST00000533910 TCP11L1Q9NUJ3 509 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 PRKAG3Q9UGI9 489 aa6.58□□□□□ -1.36
CHKA-208ENST00000533910 NAP1L2Q9ULW6 460 aaPredicted RBP6.58□□□□□ -1.36
CHKA-208ENST00000533910 MRPL42Q9Y6G3 142 aaKnown RBP6.58□□□□□ -1.36
CHKA-208ENST00000533910 ELP1O95163 1332 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 CCDC196A0A1B0GTZ2 297 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 SPDYE3A6NKU9 549 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 ZNF862O60290 1169 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 EIF4EBP3O60516 100 aaPredicted RBP6.57□□□□□ -1.36
CHKA-208ENST00000533910 DLGAP3O95886 979 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 VIL1P09327 827 aaKnown RBP6.57□□□□□ -1.36
CHKA-208ENST00000533910 FURINP09958 794 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 CALM1P0DP23 149 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 CALM2P0DP24 149 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 CALM3P0DP25 149 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 RXRAP19793 462 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 IARSP41252 1262 aaKnown RBP6.57□□□□□ -1.36
CHKA-208ENST00000533910 GIPRP48546 466 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 ZNF165P49910 485 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 C19orf57Q0VDD7 668 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 COL9A2Q14055 689 aaPredicted RBP6.57□□□□□ -1.36
CHKA-208ENST00000533910 RAB33AQ14088 237 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 POU4F3Q15319 338 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms