RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 PAIP2BQ9ULR5 123 aaKnown RBP4.37□□□□□ -1.71
SOX6-217ENST00000533870 TRAPPC3O43617 180 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 SASH3O75995 380 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 AP3M2P53677 418 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 RASA2Q15283 850 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 C11orf63Q6NUN7 778 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 ANO5Q75V66 913 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 HEATR3Q7Z4Q2 680 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 LRGUKQ96M69 825 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 TCHPQ9BT92 498 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 PITPNM3Q9BZ71 974 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 MCM9Q9NXL9 1143 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 PCDHB6Q9Y5E3 794 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 IQANK1A0A1B0GTG1 560 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 PPP1R3GB7ZBB8 358 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 CALB2P22676 271 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 PMS2P54278 862 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 RPL26P61254 145 aaKnown RBP4.37□□□□□ -1.71
SOX6-217ENST00000533870 CYP27A1Q02318 531 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 PPP2R5CQ13362 524 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 GRM4Q14833 912 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 WDR44Q5JSH3 913 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 NUGGCQ68CJ6 796 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 MFSD5Q6N075 450 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 WDR75Q8IWA0 830 aaKnown RBP4.37□□□□□ -1.71
SOX6-217ENST00000533870 SYT2Q8N9I0 419 aaPredicted RBP4.37□□□□□ -1.71
SOX6-217ENST00000533870 U2AF1L4Q8WU68 220 aaKnown RBP4.37□□□□□ -1.71
SOX6-217ENST00000533870 PHKBQ93100 1093 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 INPP4AQ96PE3 977 aaPredicted RBP4.37□□□□□ -1.71
SOX6-217ENST00000533870 MTRQ99707 1265 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 RANBP17Q9H2T7 1088 aaKnown RBP4.37□□□□□ -1.71
SOX6-217ENST00000533870 TMCO1Q9UM00 188 aa4.37□□□□□ -1.71
SOX6-217ENST00000533870 CD163L1Q9NR16 1453 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 TTI1O43156 1089 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 NPTXRO95502 500 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 ABHD2P08910 425 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 NSFP46459 744 aaKnown RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 SLC18A1P54219 525 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 POLR2FP61218 127 aaKnown RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 MDM2Q00987 491 aaPredicted RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 CYLC2Q14093 348 aaPredicted RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 CALCRLQ16602 461 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 HADHQ16836 314 aaKnown RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 TRMT5Q32P41 509 aaKnown RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 DAB2IPQ5VWQ8 1189 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 CCNJLQ8IV13 435 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 SYCP3Q8IZU3 236 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 NSMCE1Q8WV22 266 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 ZFAND2BQ8WV99 257 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 CDKL2Q92772 493 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 SEC16BQ96JE7 1060 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 EYA3Q99504 573 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 CCDC134Q9H6E4 229 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 LGR6Q9HBX8 967 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 EMILIN3Q9NT22 766 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 TXNDC16Q9P2K2 825 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 TMEM94Q12767 1356 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 ROBO2Q9HCK4 1378 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 LRRC53A6NM62 1247 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 MGRN1O60291 552 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 CTDNEP1O95476 244 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 ATP1A1P05023 1023 aaKnown RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 NR2F2P24468 414 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 HIBADHP31937 336 aaKnown RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 SLC45A4Q5BKX6 768 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 TTI2Q6NXR4 508 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 KLC3Q6P597 504 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 NEK10Q6ZWH5 1172 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 PCGF5Q86SE9 256 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 CNBD1Q8NA66 436 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 NLRP7Q8WX94 980 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 VPS54Q9P1Q0 977 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 ADAMTS1Q9UHI8 967 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 A8MXQ7 604 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 RNF8O76064 485 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 LDHBP07195 334 aaKnown RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 ZFXP17010 805 aaPredicted RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 PEX19P40855 299 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 MKRN4PQ13434 485 aaPredicted RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 DDX27Q96GQ7 796 aaKnown RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 ZFP91Q96JP5 570 aaPredicted RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 NT5C1BQ96P26 610 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 ZIM3Q96PE6 472 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 LY9Q9HBG7 655 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 NLRC4Q9NPP4 1024 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 MTO1Q9Y2Z2 717 aaKnown RBP4.36□□□□□ -1.71
SOX6-217ENST00000533870 E9PCH4 1651 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 STRNO43815 780 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 FDX1P10109 184 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 CPA3P15088 417 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 CA4P22748 312 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 OCRLQ01968 901 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 NTRK3Q16288 839 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 HSP90AA4PQ58FG1 418 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 PALB2Q86YC2 1186 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 MAGEB6Q8N7X4 407 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 ATP11CQ8NB49 1132 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 LRRC37BQ96QE4 947 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 PRDM16Q9HAZ2 1276 aa4.36□□□□□ -1.71
SOX6-217ENST00000533870 RGL1Q9NZL6 768 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms