RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 ZSCAN10Q96SZ4 725 aaPredicted RBP14.24□□□□□ -0.13
SVIP-205ENST00000533774 ZNF215Q9UL58 517 aaPredicted RBP14.24□□□□□ -0.13
SVIP-205ENST00000533774 TRIM6-TRIM34B2RNG4 842 aa14.23□□□□□ -0.13
SVIP-205ENST00000533774 C2CD4DB7Z1M9 353 aa14.23□□□□□ -0.13
SVIP-205ENST00000533774 GCOM1H8Y6P7 765 aaPredicted RBP14.23□□□□□ -0.13
SVIP-205ENST00000533774 ZBTB5O15062 677 aa14.23□□□□□ -0.13
SVIP-205ENST00000533774 KRT37O76014 449 aa14.23□□□□□ -0.13
SVIP-205ENST00000533774 POLR2MP0CAP2 368 aa14.23□□□□□ -0.13
SVIP-205ENST00000533774 SCG2P13521 617 aa14.23□□□□□ -0.13
SVIP-205ENST00000533774 MARK3P27448 753 aa14.23□□□□□ -0.13
SVIP-205ENST00000533774 TMEM62Q0P6H9 643 aa14.23□□□□□ -0.13
SVIP-205ENST00000533774 PPFIA1Q13136 1202 aa14.23□□□□□ -0.13
SVIP-205ENST00000533774 ASTLQ6HA08 431 aaPredicted RBP14.23□□□□□ -0.13
SVIP-205ENST00000533774 LLGL2Q6P1M3 1020 aa14.23□□□□□ -0.13
SVIP-205ENST00000533774 ZSWIM5Q9P217 1185 aa14.23□□□□□ -0.13
SVIP-205ENST00000533774 MAD2L2Q9UI95 211 aa14.23□□□□□ -0.13
SVIP-205ENST00000533774 TUBE1Q9UJT0 475 aa14.23□□□□□ -0.13
SVIP-205ENST00000533774 PADI3Q9ULW8 664 aa14.23□□□□□ -0.13
SVIP-205ENST00000533774 SORCS3Q9UPU3 1222 aa14.23□□□□□ -0.13
SVIP-205ENST00000533774 PCDHB15Q9Y5E8 787 aa14.23□□□□□ -0.13
SVIP-205ENST00000533774 C2orf16Q68DN1 1984 aa14.23□□□□□ -0.13
SVIP-205ENST00000533774 GSTTP1A0A1W2PQM5 241 aa14.22□□□□□ -0.13
SVIP-205ENST00000533774 HIDE1A8MVS5 230 aa14.22□□□□□ -0.13
SVIP-205ENST00000533774 KLRF2D3W0D1 207 aa14.22□□□□□ -0.13
SVIP-205ENST00000533774 MGEA5O60502 916 aa14.22□□□□□ -0.13
SVIP-205ENST00000533774 FGF18O76093 207 aa14.22□□□□□ -0.13
SVIP-205ENST00000533774 ASGR2P07307 311 aa14.22□□□□□ -0.13
SVIP-205ENST00000533774 IBSPP21815 317 aaPredicted RBP14.22□□□□□ -0.13
SVIP-205ENST00000533774 TCF7P36402 384 aaPredicted RBP14.22□□□□□ -0.13
SVIP-205ENST00000533774 SAMD3Q8N6K7 520 aa14.22□□□□□ -0.13
SVIP-205ENST00000533774 RMDN1Q96DB5 314 aa14.22□□□□□ -0.13
SVIP-205ENST00000533774 PIGSQ96S52 555 aa14.22□□□□□ -0.13
SVIP-205ENST00000533774 CDCA3Q99618 268 aaPredicted RBP14.22□□□□□ -0.13
SVIP-205ENST00000533774 FAM49AQ9H0Q0 323 aaPredicted RBP14.22□□□□□ -0.13
SVIP-205ENST00000533774 RNF41Q9H4P4 317 aaPredicted RBP14.22□□□□□ -0.13
SVIP-205ENST00000533774 POMKQ9H5K3 350 aa14.22□□□□□ -0.13
SVIP-205ENST00000533774 TSHZ2Q9NRE2 1034 aa14.22□□□□□ -0.13
SVIP-205ENST00000533774 OTOGLQ3ZCN5 2332 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 FIBPO43427 364 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 PI15O43692 258 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 ATP9AO75110 1047 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 STAG3L1P0CL83 205 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 IGBP1P78318 339 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 UBE3AQ05086 875 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 MTMR3Q13615 1198 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 TMEM266Q2M3C6 531 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 GNPTABQ3T906 1256 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 FAM102BQ5T8I3 360 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 PLPP4Q5VZY2 271 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 CWF19L1Q69YN2 538 aaKnown RBP14.21□□□□□ -0.13
SVIP-205ENST00000533774 RSPH3Q86UC2 560 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 IQCA1Q86XH1 822 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 HOMER1Q86YM7 354 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 UBALD2Q8IYN6 164 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 COLGALT1Q8NBJ5 622 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 FEZF2Q8TBJ5 459 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 RASGRP4Q8TDF6 673 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 CWH43Q9H720 699 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 TMEM260Q9NX78 707 aa14.21□□□□□ -0.13
SVIP-205ENST00000533774 SPTBN2O15020 2390 aa14.2□□□□□ -0.14
SVIP-205ENST00000533774 IGSF9BQ9UPX0 1349 aa14.2□□□□□ -0.14
SVIP-205ENST00000533774 PALM3A6NDB9 673 aaPredicted RBP14.2□□□□□ -0.14
SVIP-205ENST00000533774 TBKBP1A7MCY6 615 aa14.2□□□□□ -0.14
SVIP-205ENST00000533774 CYTH3O43739 400 aa14.2□□□□□ -0.14
SVIP-205ENST00000533774 CCDC178Q5BJE1 867 aa14.2□□□□□ -0.14
SVIP-205ENST00000533774 TRAPPC12Q8WVT3 735 aa14.2□□□□□ -0.14
SVIP-205ENST00000533774 PCYT2Q99447 389 aa14.2□□□□□ -0.14
SVIP-205ENST00000533774 SENP7Q9BQF6 1050 aa14.2□□□□□ -0.14
SVIP-205ENST00000533774 FTHL17Q9BXU8 183 aa14.2□□□□□ -0.14
SVIP-205ENST00000533774 TYW1Q9NV66 732 aaKnown RBP14.2□□□□□ -0.14
SVIP-205ENST00000533774 PCDHB12Q9Y5F1 795 aa14.2□□□□□ -0.14
SVIP-205ENST00000533774 TRPV2Q9Y5S1 764 aa14.2□□□□□ -0.14
SVIP-205ENST00000533774 SQORQ9Y6N5 450 aa14.2□□□□□ -0.14
SVIP-205ENST00000533774 WDR81Q562E7 1941 aa14.19□□□□□ -0.14
SVIP-205ENST00000533774 ZNF213O14771 459 aa14.19□□□□□ -0.14
SVIP-205ENST00000533774 STAM2O75886 525 aa14.19□□□□□ -0.14
SVIP-205ENST00000533774 WEE2P0C1S8 567 aa14.19□□□□□ -0.14
SVIP-205ENST00000533774 INSRRP14616 1297 aa14.19□□□□□ -0.14
SVIP-205ENST00000533774 KCNA2P16389 499 aa14.19□□□□□ -0.14
SVIP-205ENST00000533774 NPR3P17342 541 aa14.19□□□□□ -0.14
SVIP-205ENST00000533774 SARSP49591 514 aaKnown RBP14.19□□□□□ -0.14
SVIP-205ENST00000533774 PDE1AP54750 535 aa14.19□□□□□ -0.14
SVIP-205ENST00000533774 SEC23AQ15436 765 aa14.19□□□□□ -0.14
SVIP-205ENST00000533774 SPOUT1Q5T280 376 aaKnown RBP14.19□□□□□ -0.14
SVIP-205ENST00000533774 KANK3Q6NY19 840 aa14.19□□□□□ -0.14
SVIP-205ENST00000533774 THNSL1Q8IYQ7 743 aa14.19□□□□□ -0.14
SVIP-205ENST00000533774 RIOX1Q9H6W3 641 aa14.19□□□□□ -0.14
SVIP-205ENST00000533774 RCAN3Q9UKA8 241 aa14.19□□□□□ -0.14
SVIP-205ENST00000533774 LRFN2Q9ULH4 789 aa14.19□□□□□ -0.14
SVIP-205ENST00000533774 NR2E1Q9Y466 385 aa14.19□□□□□ -0.14
SVIP-205ENST00000533774 CACNA1IQ9P0X4 2223 aa14.18□□□□□ -0.14
SVIP-205ENST00000533774 CLCN5P51795 746 aa14.18□□□□□ -0.14
SVIP-205ENST00000533774 PAK2Q13177 524 aa14.18□□□□□ -0.14
SVIP-205ENST00000533774 MCTP2Q6DN12 878 aa14.18□□□□□ -0.14
SVIP-205ENST00000533774 CELF4Q9BZC1 486 aaKnown RBP14.18□□□□□ -0.14
SVIP-205ENST00000533774 CDHR5Q9HBB8 845 aa14.18□□□□□ -0.14
SVIP-205ENST00000533774 ERAP1Q9NZ08 941 aa14.18□□□□□ -0.14
SVIP-205ENST00000533774 LIMD1Q9UGP4 676 aa14.18□□□□□ -0.14
SVIP-205ENST00000533774 HOXB8P17481 243 aaPredicted RBP14.17□□□□□ -0.14
SVIP-205ENST00000533774 PBX3P40426 434 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms