RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 ATP2B4P23634 1241 aa10.22□□□□□ -0.77
BDNF-216ENST00000532997 PPP4CP60510 307 aa10.22□□□□□ -0.77
BDNF-216ENST00000532997 DHX34Q14147 1143 aaKnown RBP10.22□□□□□ -0.77
BDNF-216ENST00000532997 CCDC13Q8IYE1 715 aa10.22□□□□□ -0.77
BDNF-216ENST00000532997 SEC16BQ96JE7 1060 aa10.22□□□□□ -0.77
BDNF-216ENST00000532997 KCNK9Q9NPC2 374 aa10.22□□□□□ -0.77
BDNF-216ENST00000532997 PASKQ96RG2 1323 aa10.22□□□□□ -0.77
BDNF-216ENST00000532997 ZNF142P52746 1687 aaPredicted RBP10.22□□□□□ -0.77
BDNF-216ENST00000532997 USP17L5A8MUK1 530 aa10.22□□□□□ -0.77
BDNF-216ENST00000532997 RBAK-RBAKDNI3L0D1 243 aa10.22□□□□□ -0.77
BDNF-216ENST00000532997 DAPK3O43293 454 aa10.22□□□□□ -0.77
BDNF-216ENST00000532997 SUN1O94901 812 aa10.22□□□□□ -0.77
BDNF-216ENST00000532997 SETDB1Q15047 1291 aa10.22□□□□□ -0.77
BDNF-216ENST00000532997 KNOP1Q1ED39 458 aaKnown RBP10.22□□□□□ -0.77
BDNF-216ENST00000532997 INTS5Q6P9B9 1019 aaKnown RBP10.22□□□□□ -0.77
BDNF-216ENST00000532997 RHOT2Q8IXI1 618 aa10.22□□□□□ -0.77
BDNF-216ENST00000532997 FAM186BQ8IYM0 893 aa10.22□□□□□ -0.77
BDNF-216ENST00000532997 GBP7Q8N8V2 638 aaPredicted RBP10.22□□□□□ -0.77
BDNF-216ENST00000532997 CEP95Q96GE4 821 aa10.22□□□□□ -0.77
BDNF-216ENST00000532997 SLC40A1Q9NP59 571 aa10.22□□□□□ -0.77
BDNF-216ENST00000532997 SYNGAP1Q96PV0 1343 aa10.22□□□□□ -0.77
BDNF-216ENST00000532997 PITPNM2Q9BZ72 1349 aa10.22□□□□□ -0.77
BDNF-216ENST00000532997 CFAP73A6NFT4 308 aa10.21□□□□□ -0.77
BDNF-216ENST00000532997 ZNF233A6NK53 670 aa10.21□□□□□ -0.77
BDNF-216ENST00000532997 MMEP08473 750 aa10.21□□□□□ -0.77
BDNF-216ENST00000532997 PLTPP55058 493 aa10.21□□□□□ -0.77
BDNF-216ENST00000532997 HIBCHQ6NVY1 386 aaPredicted RBP10.21□□□□□ -0.77
BDNF-216ENST00000532997 DPP8Q6V1X1 898 aaPredicted RBP10.21□□□□□ -0.77
BDNF-216ENST00000532997 USP37Q86T82 979 aa10.21□□□□□ -0.77
BDNF-216ENST00000532997 MYCT1Q8N699 235 aa10.21□□□□□ -0.77
BDNF-216ENST00000532997 N4BP2L2Q92802 583 aaPredicted RBP10.21□□□□□ -0.77
BDNF-216ENST00000532997 SGSM3Q96HU1 749 aa10.21□□□□□ -0.77
BDNF-216ENST00000532997 TYW1Q9NV66 732 aaKnown RBP10.21□□□□□ -0.77
BDNF-216ENST00000532997 FLT1P17948 1338 aa10.21□□□□□ -0.77
BDNF-216ENST00000532997 BTNL10A8MVZ5 291 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 PDXKO00764 312 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 UCHL3P15374 230 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 MFSD14BQ5SR56 506 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 C16orf86Q6ZW13 317 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 TRIM59Q8IWR1 403 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 FBF1Q8TES7 1133 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 RFFLQ8WZ73 363 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 SHISA4Q96DD7 197 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 IL17RBQ9NRM6 502 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 BLOC1S4Q9NUP1 217 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 AMACRQ9UHK6 382 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 A0A1W2PRG0 241 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 E9PMD0 336 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 SMIM22K7EJ46 135 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 SLC16A3O15427 465 aaKnown RBP10.21□□□□□ -0.78
BDNF-216ENST00000532997 FAM153BP0C7A2 387 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 VEGFAP15692 232 aaPredicted RBP10.21□□□□□ -0.78
BDNF-216ENST00000532997 CACNB1Q02641 598 aaPredicted RBP10.21□□□□□ -0.78
BDNF-216ENST00000532997 PABPC4Q13310 644 aaKnown RBP eCLIP10.21□□□□□ -0.78
BDNF-216ENST00000532997 UBE2SQ16763 222 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 FAM153CQ494X1 144 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 LRRC55Q6ZSA7 311 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 INTS8Q75QN2 995 aaKnown RBP10.21□□□□□ -0.78
BDNF-216ENST00000532997 CNBD1Q8NA66 436 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 FAM153AQ9UHL3 310 aa10.21□□□□□ -0.78
BDNF-216ENST00000532997 A0A0A6YYK5 440 aaPredicted RBP10.2□□□□□ -0.78
BDNF-216ENST00000532997 GNPATO15228 680 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 CLTAP09496 248 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 PMS2P54278 862 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 NPEPPSP55786 919 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 PPARDQ03181 441 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 AP3B2Q13367 1082 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 PNMA5Q96PV4 448 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 THRAP3Q9Y2W1 955 aaKnown RBP10.2□□□□□ -0.78
BDNF-216ENST00000532997 RABGAP1Q9Y3P9 1069 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 MYO5AQ9Y4I1 1855 aaKnown RBP10.2□□□□□ -0.78
BDNF-216ENST00000532997 LOC102724159A0A0B4J2E5 919 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 EXOC3O60645 756 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 NR3C1P04150 777 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 ALDH3A1P30838 453 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 PDE6CP51160 858 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 PTK2Q05397 1052 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 PWP2Q15269 919 aaKnown RBP10.2□□□□□ -0.78
BDNF-216ENST00000532997 PRR16Q569H4 304 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 INPP4AQ96PE3 977 aaPredicted RBP10.2□□□□□ -0.78
BDNF-216ENST00000532997 XPO6Q96QU8 1125 aaKnown RBP10.2□□□□□ -0.78
BDNF-216ENST00000532997 DHX36Q9H2U1 1008 aaKnown RBP10.2□□□□□ -0.78
BDNF-216ENST00000532997 NAGPAQ9UK23 515 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 PCDHA1Q9Y5I3 950 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 MYH10P35580 1976 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 EPHB6O15197 1021 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 DDR1Q08345 913 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 E2F5Q15329 346 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 TMEM119Q4V9L6 283 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 SPDYCQ5MJ68 293 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 TPCN2Q8NHX9 752 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 GJA10Q969M2 543 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 CCDC17Q96LX7 622 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 SLC4A9Q96Q91 983 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.2□□□□□ -0.78
BDNF-216ENST00000532997 GRIN2DO15399 1336 aa10.2□□□□□ -0.78
BDNF-216ENST00000532997 POTEB3A0JP26 581 aa10.19□□□□□ -0.78
BDNF-216ENST00000532997 POTECB2RU33 542 aa10.19□□□□□ -0.78
BDNF-216ENST00000532997 RASGRF2O14827 1237 aa10.19□□□□□ -0.78
BDNF-216ENST00000532997 ZBTB5O15062 677 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms