RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 BTBD18B2RXH4 712 aa17.36■□□□□ 0.37
CPSF1-210ENST00000532935 CHMP2AO43633 222 aa17.36■□□□□ 0.37
CPSF1-210ENST00000532935 HBP1O60381 514 aa17.36■□□□□ 0.37
CPSF1-210ENST00000532935 CCNT1O60563 726 aaKnown RBP17.36■□□□□ 0.37
CPSF1-210ENST00000532935 PSMD10O75832 226 aa17.36■□□□□ 0.37
CPSF1-210ENST00000532935 GCFC2P16383 781 aaKnown RBP17.36■□□□□ 0.37
CPSF1-210ENST00000532935 ATP2A2P16615 1042 aaKnown RBP17.36■□□□□ 0.37
CPSF1-210ENST00000532935 ATP4AP20648 1035 aa17.36■□□□□ 0.37
CPSF1-210ENST00000532935 SFNP31947 248 aa17.36■□□□□ 0.37
CPSF1-210ENST00000532935 PBX2P40425 430 aa17.36■□□□□ 0.37
CPSF1-210ENST00000532935 HMGN5P82970 282 aaKnown RBP17.36■□□□□ 0.37
CPSF1-210ENST00000532935 TCTN1Q2MV58 587 aa17.36■□□□□ 0.37
CPSF1-210ENST00000532935 FAM26DQ5JW98 314 aa17.36■□□□□ 0.37
CPSF1-210ENST00000532935 PPP4R3AQ6IN85 833 aa17.36■□□□□ 0.37
CPSF1-210ENST00000532935 DIS3L2Q8IYB7 885 aaKnown RBP17.36■□□□□ 0.37
CPSF1-210ENST00000532935 TRAPPC12Q8WVT3 735 aa17.36■□□□□ 0.37
CPSF1-210ENST00000532935 ZBTB10Q96DT7 871 aa17.36■□□□□ 0.37
CPSF1-210ENST00000532935 FAM161BQ96MY7 647 aa17.36■□□□□ 0.37
CPSF1-210ENST00000532935 NAP1L4Q99733 375 aaKnown RBP17.36■□□□□ 0.37
CPSF1-210ENST00000532935 DISC1Q9NRI5 854 aa17.36■□□□□ 0.37
CPSF1-210ENST00000532935 GABBR1Q9UBS5 961 aa17.36■□□□□ 0.37
CPSF1-210ENST00000532935 IGSF9BQ9UPX0 1349 aa17.36■□□□□ 0.37
CPSF1-210ENST00000532935 TMEM265A0A087WTH1 108 aa17.35■□□□□ 0.37
CPSF1-210ENST00000532935 RBAK-RBAKDNI3L0D1 243 aa17.35■□□□□ 0.37
CPSF1-210ENST00000532935 JAK3P52333 1124 aa17.35■□□□□ 0.37
CPSF1-210ENST00000532935 RAB30Q15771 203 aa17.35■□□□□ 0.37
CPSF1-210ENST00000532935 RSPH3Q86UC2 560 aa17.35■□□□□ 0.37
CPSF1-210ENST00000532935 CKAP2LQ8IYA6 745 aa17.35■□□□□ 0.37
CPSF1-210ENST00000532935 DNAJB3Q8WWF6 145 aa17.35■□□□□ 0.37
CPSF1-210ENST00000532935 TIFAQ96CG3 184 aa17.35■□□□□ 0.37
CPSF1-210ENST00000532935 C8orf76Q96K31 380 aa17.35■□□□□ 0.37
CPSF1-210ENST00000532935 SLC9A7Q96T83 725 aa17.35■□□□□ 0.37
CPSF1-210ENST00000532935 TTYH1Q9H313 450 aaPredicted RBP17.35■□□□□ 0.37
CPSF1-210ENST00000532935 SEMA6BQ9H3T3 888 aa17.35■□□□□ 0.37
CPSF1-210ENST00000532935 PCDHA2Q9Y5H9 948 aa17.35■□□□□ 0.37
CPSF1-210ENST00000532935 COL1A2P08123 1366 aa17.35■□□□□ 0.37
CPSF1-210ENST00000532935 CHD7Q9P2D1 2997 aa17.35■□□□□ 0.37
CPSF1-210ENST00000532935 ABHD14A-ACY1A0A1B0GW23 586 aa17.34■□□□□ 0.37
CPSF1-210ENST00000532935 CHRNA1P02708 482 aa17.34■□□□□ 0.37
CPSF1-210ENST00000532935 KCNJ6P48051 423 aa17.34■□□□□ 0.37
CPSF1-210ENST00000532935 RABGGTBP53611 331 aa17.34■□□□□ 0.37
CPSF1-210ENST00000532935 GUCY1B3Q02153 619 aa17.34■□□□□ 0.37
CPSF1-210ENST00000532935 PLEKHG4Q58EX7 1191 aa17.34■□□□□ 0.37
CPSF1-210ENST00000532935 ZNF484Q5JVG2 852 aa17.34■□□□□ 0.37
CPSF1-210ENST00000532935 MTHFD1LQ6UB35 978 aa17.34■□□□□ 0.37
CPSF1-210ENST00000532935 B3GNT9Q6UX72 402 aa17.34■□□□□ 0.37
CPSF1-210ENST00000532935 MIER3Q7Z3K6 550 aa17.34■□□□□ 0.37
CPSF1-210ENST00000532935 RDM1Q8NG50 284 aa17.34■□□□□ 0.37
CPSF1-210ENST00000532935 PHOSPHO2Q8TCD6 241 aa17.34■□□□□ 0.37
CPSF1-210ENST00000532935 BBXQ8WY36 941 aaPredicted RBP17.34■□□□□ 0.37
CPSF1-210ENST00000532935 FAM20AQ96MK3 541 aa17.34■□□□□ 0.37
CPSF1-210ENST00000532935 OSBPL7Q9BZF2 842 aa17.34■□□□□ 0.37
CPSF1-210ENST00000532935 FAM49AQ9H0Q0 323 aaPredicted RBP17.34■□□□□ 0.37
CPSF1-210ENST00000532935 KCNMB3Q9NPA1 279 aa17.34■□□□□ 0.37
CPSF1-210ENST00000532935 MSRAQ9UJ68 235 aa17.34■□□□□ 0.37
CPSF1-210ENST00000532935 ZBTB42B2RXF5 422 aa17.33■□□□□ 0.36
CPSF1-210ENST00000532935 RPLP2P05387 115 aaKnown RBP17.33■□□□□ 0.36
CPSF1-210ENST00000532935 WDR5P61964 334 aaKnown RBP17.33■□□□□ 0.36
CPSF1-210ENST00000532935 MGAT3Q09327 533 aa17.33■□□□□ 0.36
CPSF1-210ENST00000532935 IKBKEQ14164 716 aa17.33■□□□□ 0.36
CPSF1-210ENST00000532935 SAFBQ15424 915 aaKnown RBP eCLIP17.33■□□□□ 0.36
CPSF1-210ENST00000532935 FAM184AQ8NB25 1140 aa17.33■□□□□ 0.36
CPSF1-210ENST00000532935 DBF4BQ8NFT6 615 aa17.33■□□□□ 0.36
CPSF1-210ENST00000532935 FAM167AQ96KS9 214 aa17.33■□□□□ 0.36
CPSF1-210ENST00000532935 BACH2Q9BYV9 841 aa17.33■□□□□ 0.36
CPSF1-210ENST00000532935 SMIM35A0A1B0GVV1 85 aa17.32■□□□□ 0.36
CPSF1-210ENST00000532935 TBX3O15119 743 aa17.32■□□□□ 0.36
CPSF1-210ENST00000532935 ZNF862O60290 1169 aa17.32■□□□□ 0.36
CPSF1-210ENST00000532935 EFCAB14O75071 495 aa17.32■□□□□ 0.36
CPSF1-210ENST00000532935 CD2BP2O95400 341 aaKnown RBP17.32■□□□□ 0.36
CPSF1-210ENST00000532935 KLRC1P26715 233 aa17.32■□□□□ 0.36
CPSF1-210ENST00000532935 MRPS6P82932 125 aaKnown RBP17.32■□□□□ 0.36
CPSF1-210ENST00000532935 UGCGQ16739 394 aa17.32■□□□□ 0.36
CPSF1-210ENST00000532935 TRMT1LQ7Z2T5 733 aaKnown RBP17.32■□□□□ 0.36
CPSF1-210ENST00000532935 POTEDQ86YR6 584 aa17.32■□□□□ 0.36
CPSF1-210ENST00000532935 SEPT8Q92599 483 aa17.32■□□□□ 0.36
CPSF1-210ENST00000532935 HAS1Q92839 578 aa17.32■□□□□ 0.36
CPSF1-210ENST00000532935 TMX3Q96JJ7 454 aa17.32■□□□□ 0.36
CPSF1-210ENST00000532935 GUCD1Q96NT3 240 aa17.32■□□□□ 0.36
CPSF1-210ENST00000532935 VAV3Q9UKW4 847 aa17.32■□□□□ 0.36
CPSF1-210ENST00000532935 YBX2Q9Y2T7 364 aaKnown RBP17.32■□□□□ 0.36
CPSF1-210ENST00000532935 PCDHA11Q9Y5I1 949 aa17.32■□□□□ 0.36
CPSF1-210ENST00000532935 CDY2AQ9Y6F7 541 aa17.32■□□□□ 0.36
CPSF1-210ENST00000532935 EYSQ5T1H1 3165 aa17.32■□□□□ 0.36
CPSF1-210ENST00000532935 OATP04181 439 aa17.31■□□□□ 0.36
CPSF1-210ENST00000532935 MYOGP15173 224 aa17.31■□□□□ 0.36
CPSF1-210ENST00000532935 MCM2P49736 904 aa17.31■□□□□ 0.36
CPSF1-210ENST00000532935 DEFB103AP81534 67 aa17.31■□□□□ 0.36
CPSF1-210ENST00000532935 PRKCEQ02156 737 aa17.31■□□□□ 0.36
CPSF1-210ENST00000532935 PPP2R5CQ13362 524 aa17.31■□□□□ 0.36
CPSF1-210ENST00000532935 IER5Q5VY09 327 aa17.31■□□□□ 0.36
CPSF1-210ENST00000532935 HERC6Q8IVU3 1022 aa17.31■□□□□ 0.36
CPSF1-210ENST00000532935 FBXO18Q8NFZ0 1043 aa17.31■□□□□ 0.36
CPSF1-210ENST00000532935 NKX2-4Q9H2Z4 354 aa17.31■□□□□ 0.36
CPSF1-210ENST00000532935 ZNF576Q9H609 170 aa17.31■□□□□ 0.36
CPSF1-210ENST00000532935 CEP131Q9UPN4 1083 aa17.31■□□□□ 0.36
CPSF1-210ENST00000532935 TRANK1O15050 2925 aa17.31■□□□□ 0.36
CPSF1-210ENST00000532935 MARCH6O60337 910 aa17.3■□□□□ 0.36
CPSF1-210ENST00000532935 BAG4O95429 457 aaKnown RBP17.3■□□□□ 0.36
CPSF1-210ENST00000532935 C22orf31O95567 290 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms