RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 IGBP1P78318 339 aa27.87■■■□□ 2.05
USP48-214ENST00000532737 PRKCEQ02156 737 aa27.87■■■□□ 2.05
USP48-214ENST00000532737 TRAPPC12Q8WVT3 735 aa27.87■■■□□ 2.05
USP48-214ENST00000532737 TNPO1Q92973 898 aaKnown RBP27.87■■■□□ 2.05
USP48-214ENST00000532737 WNT8BQ93098 351 aa27.87■■■□□ 2.05
USP48-214ENST00000532737 DYDC2Q96IM9 177 aa27.87■■■□□ 2.05
USP48-214ENST00000532737 EIF2AK1Q9BQI3 630 aaKnown RBP27.87■■■□□ 2.05
USP48-214ENST00000532737 PPP1R12CQ9BZL4 782 aa27.87■■■□□ 2.05
USP48-214ENST00000532737 FTOQ9C0B1 505 aaKnown RBP eCLIP27.87■■■□□ 2.05
USP48-214ENST00000532737 WRAP73Q9P2S5 460 aaPredicted RBP27.87■■■□□ 2.05
USP48-214ENST00000532737 COL6A3P12111 3177 aa27.87■■■□□ 2.05
USP48-214ENST00000532737 RRN3P2A6NIE6 340 aa27.86■■■□□ 2.05
USP48-214ENST00000532737 OATP04181 439 aa27.86■■■□□ 2.05
USP48-214ENST00000532737 P4HBP07237 508 aaKnown RBP27.86■■■□□ 2.05
USP48-214ENST00000532737 RAG1P15918 1043 aa27.86■■■□□ 2.05
USP48-214ENST00000532737 PRPHP41219 470 aa27.86■■■□□ 2.05
USP48-214ENST00000532737 MAGEA10P43363 369 aaPredicted RBP27.86■■■□□ 2.05
USP48-214ENST00000532737 QARSP47897 775 aaKnown RBP27.86■■■□□ 2.05
USP48-214ENST00000532737 FXR2P51116 673 aaKnown RBP eCLIP27.86■■■□□ 2.055e-12■□□□□ 9.9
USP48-214ENST00000532737 PTK7Q13308 1070 aa27.86■■■□□ 2.05
USP48-214ENST00000532737 SF3A1Q15459 793 aaKnown RBP27.86■■■□□ 2.05
USP48-214ENST00000532737 SERINC5Q86VE9 423 aa27.86■■■□□ 2.05
USP48-214ENST00000532737 BBXQ8WY36 941 aaPredicted RBP27.86■■■□□ 2.05
USP48-214ENST00000532737 ZBTB10Q96DT7 871 aa27.86■■■□□ 2.05
USP48-214ENST00000532737 HSD17B14Q9BPX1 270 aa27.86■■■□□ 2.05
USP48-214ENST00000532737 HIPK3Q9H422 1215 aa27.86■■■□□ 2.05
USP48-214ENST00000532737 CLIC4Q9Y696 253 aa27.86■■■□□ 2.05
USP48-214ENST00000532737 UMODL1Q5DID0 1318 aa27.86■■■□□ 2.05
USP48-214ENST00000532737 ZBTB42B2RXF5 422 aa27.85■■■□□ 2.05
USP48-214ENST00000532737 SLITRK3O94933 977 aa27.85■■■□□ 2.05
USP48-214ENST00000532737 F13A1P00488 732 aa27.85■■■□□ 2.05
USP48-214ENST00000532737 TIMP1P01033 207 aa27.85■■■□□ 2.05
USP48-214ENST00000532737 CYP2C18P33260 490 aa27.85■■■□□ 2.05
USP48-214ENST00000532737 CYP4A11Q02928 519 aa27.85■■■□□ 2.05
USP48-214ENST00000532737 CTTNQ14247 550 aaKnown RBP27.85■■■□□ 2.05
USP48-214ENST00000532737 TMEM266Q2M3C6 531 aa27.85■■■□□ 2.05
USP48-214ENST00000532737 FAM167AQ96KS9 214 aa27.85■■■□□ 2.05
USP48-214ENST00000532737 NRBP2Q9NSY0 501 aa27.85■■■□□ 2.05
USP48-214ENST00000532737 MBLAC1A4D2B0 266 aaPredicted RBP27.84■■■□□ 2.05
USP48-214ENST00000532737 TRIM71Q2Q1W2 868 aaKnown RBP27.84■■■□□ 2.05
USP48-214ENST00000532737 XKR3Q5GH77 459 aa27.84■■■□□ 2.05
USP48-214ENST00000532737 ZNF484Q5JVG2 852 aa27.84■■■□□ 2.05
USP48-214ENST00000532737 DTHD1Q6ZMT9 781 aa27.84■■■□□ 2.05
USP48-214ENST00000532737 BADQ92934 168 aa27.84■■■□□ 2.05
USP48-214ENST00000532737 LXNQ9BS40 222 aa27.84■■■□□ 2.05
USP48-214ENST00000532737 ZDHHC9Q9Y397 364 aa27.84■■■□□ 2.05
USP48-214ENST00000532737 RUFY4Q6ZNE9 571 aa27.83■■■□□ 2.05
USP48-214ENST00000532737 TPH2Q8IWU9 490 aa27.83■■■□□ 2.05
USP48-214ENST00000532737 USP28Q96RU2 1077 aa27.83■■■□□ 2.05
USP48-214ENST00000532737 TUBE1Q9UJT0 475 aa27.83■■■□□ 2.05
USP48-214ENST00000532737 TMEM150BA6NC51 233 aa27.82■■■□□ 2.04
USP48-214ENST00000532737 DDX11L8A8MPP1 907 aa27.82■■■□□ 2.04
USP48-214ENST00000532737 BRD1O95696 1058 aa27.82■■■□□ 2.04
USP48-214ENST00000532737 BMP15O95972 392 aa27.82■■■□□ 2.04
USP48-214ENST00000532737 MDM2Q00987 491 aaPredicted RBP27.82■■■□□ 2.04
USP48-214ENST00000532737 CEBPZQ03701 1054 aaKnown RBP27.82■■■□□ 2.04
USP48-214ENST00000532737 PDIA5Q14554 519 aa27.82■■■□□ 2.04
USP48-214ENST00000532737 PTPAQ15257 358 aa27.82■■■□□ 2.04
USP48-214ENST00000532737 ARL6IP4Q66PJ3 421 aaKnown RBP27.82■■■□□ 2.04
USP48-214ENST00000532737 IGSF22Q8N9C0 903 aa27.82■■■□□ 2.04
USP48-214ENST00000532737 WNT8AQ9H1J5 351 aa27.82■■■□□ 2.04
USP48-214ENST00000532737 ZSWIM4Q9H7M6 989 aa27.82■■■□□ 2.04
USP48-214ENST00000532737 CEP131Q9UPN4 1083 aa27.82■■■□□ 2.04
USP48-214ENST00000532737 COL1A2P08123 1366 aa27.82■■■□□ 2.04
USP48-214ENST00000532737 TRIP12Q14669 1992 aaPredicted RBP27.82■■■□□ 2.04
USP48-214ENST00000532737 DKC1O60832 514 aaKnown RBP eCLIP27.81■■■□□ 2.04
USP48-214ENST00000532737 SPATA31C1P0DKV0 1188 aa27.81■■■□□ 2.04
USP48-214ENST00000532737 KLRC1P26715 233 aa27.81■■■□□ 2.04
USP48-214ENST00000532737 CCL23P55773 120 aa27.81■■■□□ 2.04
USP48-214ENST00000532737 RBL2Q08999 1139 aa27.81■■■□□ 2.04
USP48-214ENST00000532737 BFSP2Q13515 415 aa27.81■■■□□ 2.04
USP48-214ENST00000532737 TARBP2Q15633 366 aaKnown RBP27.81■■■□□ 2.04
USP48-214ENST00000532737 MFSD5Q6N075 450 aa27.81■■■□□ 2.04
USP48-214ENST00000532737 MTHFD1LQ6UB35 978 aa27.81■■■□□ 2.04
USP48-214ENST00000532737 ANO5Q75V66 913 aa27.81■■■□□ 2.04
USP48-214ENST00000532737 C4orf19Q8IY42 314 aa27.81■■■□□ 2.04
USP48-214ENST00000532737 NEK9Q8TD19 979 aa27.81■■■□□ 2.04
USP48-214ENST00000532737 LBHD1Q9BQE6 289 aaPredicted RBP27.81■■■□□ 2.04
USP48-214ENST00000532737 NIFKQ9BYG3 293 aaKnown RBP27.81■■■□□ 2.04
USP48-214ENST00000532737 LRWD1Q9UFC0 647 aa27.81■■■□□ 2.04
USP48-214ENST00000532737 SEPT9Q9UHD8 586 aaPredicted RBP27.81■■■□□ 2.04
USP48-214ENST00000532737 MYH9P35579 1960 aaKnown RBP27.8■■■□□ 2.04
USP48-214ENST00000532737 MED24O75448 989 aa27.8■■■□□ 2.04
USP48-214ENST00000532737 FOXD4L6Q3SYB3 417 aaPredicted RBP27.8■■■□□ 2.04
USP48-214ENST00000532737 FOXD4L3Q6VB84 417 aaPredicted RBP27.8■■■□□ 2.04
USP48-214ENST00000532737 CATSPER3Q86XQ3 398 aa27.8■■■□□ 2.04
USP48-214ENST00000532737 RETREG2Q8NC44 543 aa27.8■■■□□ 2.04
USP48-214ENST00000532737 CAGE1Q8TC20 777 aa27.8■■■□□ 2.04
USP48-214ENST00000532737 PCDHA2Q9Y5H9 948 aa27.8■■■□□ 2.04
USP48-214ENST00000532737 WDR81Q562E7 1941 aa27.8■■■□□ 2.04
USP48-214ENST00000532737 LTBP2Q14767 1821 aa27.79■■■□□ 2.04
USP48-214ENST00000532737 VWA3AA6NCI4 1184 aa27.79■■■□□ 2.04
USP48-214ENST00000532737 PP2D1A8MPX8 630 aa27.79■■■□□ 2.04
USP48-214ENST00000532737 PITPNM1O00562 1244 aa27.79■■■□□ 2.04
USP48-214ENST00000532737 ZBTB39O15060 712 aa27.79■■■□□ 2.04
USP48-214ENST00000532737 LYPLA2O95372 231 aa27.79■■■□□ 2.04
USP48-214ENST00000532737 CKBP12277 381 aa27.79■■■□□ 2.04
USP48-214ENST00000532737 ANP32AP39687 249 aaKnown RBP27.79■■■□□ 2.04
USP48-214ENST00000532737 LRIT3Q3SXY7 679 aa27.79■■■□□ 2.04
USP48-214ENST00000532737 PLA2G4FQ68DD2 849 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms