RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 HOXD10P28358 340 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 SNX1Q13596 522 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 PFKFB3Q16875 520 aaPredicted RBP15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 CATSPER4Q7RTX7 472 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 DYDC2Q96IM9 177 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 RNF146Q9NTX7 359 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 PCK1P35558 622 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 ECE1P42892 770 aa15.98■□□□□ 0.15
PCDHA9-202ENST00000532602 SLC4A1P02730 911 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 PDE1BQ01064 536 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 MTMR2Q13614 643 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 ZBED2Q9BTP6 218 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 DONSONQ9NYP3 566 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 LMCD1Q9NZU5 365 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 CNOT7Q9UIV1 285 aaKnown RBP15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 BAG5Q9UL15 447 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 DYNLT1P63172 113 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 DSTYKQ6XUX3 929 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 PPP4R3CPQ6ZMV5 832 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 SPON1Q9HCB6 807 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 INPP5FQ9Y2H2 1132 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 ZC3H13Q5T200 1668 aaKnown RBP15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 F5H6K3 240 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 ETF1P62495 437 aaKnown RBP15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 IRX4P78413 519 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 KLRC3Q07444 240 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 RAB44Q7Z6P3 723 aaPredicted RBP15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 CLEC10AQ8IUN9 316 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 THNSL1Q8IYQ7 743 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 HEXIM2Q96MH2 286 aaKnown RBP15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 TOPORSQ9NS56 1045 aaPredicted RBP15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 HMGCS2P54868 508 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 FAM114A2Q9NRY5 505 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 NXNQ6DKJ4 435 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 MCPH1Q8NEM0 835 aa15.97■□□□□ 0.15
PCDHA9-202ENST00000532602 IKBKBO14920 756 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 MCF2LO15068 1137 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 CCNYQ8ND76 341 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 ANGPTL3Q9Y5C1 460 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 GOLGA8QA0A0J9YX86 632 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 GOLGA8OA6NCC3 632 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 GOLGA8NF8WBI6 632 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 APBA1Q02410 837 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 CUL4AQ13619 759 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 SPATA31A5Q5VU36 1347 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 SPATA31A7Q8IWB4 1347 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 HSPA6P17066 643 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 COPB2P35606 906 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 HDAC11Q96DB2 347 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 IQSEC2Q5JU85 1478 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 E9PMD0 336 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 INHBAP08476 426 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 FDX1P10109 184 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 CCNE1P24864 410 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 ASPHQ12797 758 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 TSTA3Q13630 321 aaPredicted RBP15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 ARHGEF40Q8TER5 1519 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 FAM8A1Q9UBU6 413 aa15.96■□□□□ 0.15
PCDHA9-202ENST00000532602 GPC4O75487 556 aa15.96■□□□□ 0.14
PCDHA9-202ENST00000532602 CIITAP33076 1130 aa15.96■□□□□ 0.14
PCDHA9-202ENST00000532602 PRELPP51888 382 aa15.96■□□□□ 0.14
PCDHA9-202ENST00000532602 GAS2L3Q86XJ1 694 aa15.96■□□□□ 0.14
PCDHA9-202ENST00000532602 SGK1O00141 431 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 KPNA2P52292 529 aaKnown RBP15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 SEPT6Q14141 434 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 ARL13BQ3SXY8 428 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 MICAL1Q8TDZ2 1067 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 VCX3AQ9NNX9 186 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 GDAQ9Y2T3 454 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 IQCA1LA6NCM1 817 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 OR6B2Q6IFH4 312 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 SWSAP1Q6NVH7 229 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 GRM4Q14833 912 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 MB21D2Q8IYB1 491 aaPredicted RBP15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 PARD3BQ8TEW8 1205 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 MAGOHBQ96A72 148 aaKnown RBP15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 TBC1D22BQ9NU19 505 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 HAUS8Q9BT25 410 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 JRKLQ9Y4A0 524 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 PSMD14O00487 310 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 ACTN1P12814 892 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 GTF2A1P52655 376 aaPredicted RBP15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 TNFAIP2Q03169 654 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 PNMA8AQ86V59 439 aaPredicted RBP15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 NSUN6Q8TEA1 469 aaKnown RBP15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 RWDD2AQ9UIY3 292 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 RCOR1Q9UKL0 485 aa15.95■□□□□ 0.14
PCDHA9-202ENST00000532602 ITSN1Q15811 1721 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 QRICH1Q2TAL8 776 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 ZNF394Q53GI3 561 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 C10orf76Q5T2E6 689 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 MYRIPQ8NFW9 859 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 CCHCR1Q8TD31 782 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 NSUN4Q96CB9 384 aaKnown RBP15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 INO80Q9ULG1 1556 aaPredicted RBP15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 POLR1AO95602 1720 aaPredicted RBP15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 GOLGA8KD6RF30 607 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 RHPN2Q8IUC4 686 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 PRPSAP2O60256 369 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 MOCS3O95396 460 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms