RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 ADGRE1Q14246 886 aa19.5■□□□□ 0.71
PHRF1-204ENST00000532550 NONOQ15233 471 aaKnown RBP eCLIP19.5■□□□□ 0.71
PHRF1-204ENST00000532550 Q4G0T1 1027 aa19.5■□□□□ 0.71
PHRF1-204ENST00000532550 ZNF484Q5JVG2 852 aa19.5■□□□□ 0.71
PHRF1-204ENST00000532550 MTHFD1LQ6UB35 978 aa19.5■□□□□ 0.71
PHRF1-204ENST00000532550 KRT25Q7Z3Z0 450 aa19.5■□□□□ 0.71
PHRF1-204ENST00000532550 MYOCDQ8IZQ8 938 aa19.5■□□□□ 0.71
PHRF1-204ENST00000532550 NME8Q8N427 588 aa19.5■□□□□ 0.71
PHRF1-204ENST00000532550 PPM1EQ8WY54 764 aa19.5■□□□□ 0.71
PHRF1-204ENST00000532550 ZBTB10Q96DT7 871 aa19.5■□□□□ 0.71
PHRF1-204ENST00000532550 RIT2Q99578 217 aa19.5■□□□□ 0.71
PHRF1-204ENST00000532550 ORC3Q9UBD5 711 aaPredicted RBP19.5■□□□□ 0.71
PHRF1-204ENST00000532550 CDY2AQ9Y6F7 541 aa19.5■□□□□ 0.71
PHRF1-204ENST00000532550 CHD9Q3L8U1 2897 aa19.5■□□□□ 0.71
PHRF1-204ENST00000532550 PTPRSQ13332 1948 aa19.49■□□□□ 0.71
PHRF1-204ENST00000532550 CYP3A7-CYP3A51PA0A087WV96 503 aa19.49■□□□□ 0.71
PHRF1-204ENST00000532550 WDR64B1ANS9 1081 aa19.49■□□□□ 0.71
PHRF1-204ENST00000532550 GAS7O60861 476 aa19.49■□□□□ 0.71
PHRF1-204ENST00000532550 GHRP10912 638 aa19.49■□□□□ 0.71
PHRF1-204ENST00000532550 CYP3A7P24462 503 aa19.49■□□□□ 0.71
PHRF1-204ENST00000532550 KLRC1P26715 233 aa19.49■□□□□ 0.71
PHRF1-204ENST00000532550 MGAT3Q09327 533 aa19.49■□□□□ 0.71
PHRF1-204ENST00000532550 ME3Q16798 604 aa19.49■□□□□ 0.71
PHRF1-204ENST00000532550 NECAB1Q8N987 351 aa19.49■□□□□ 0.71
PHRF1-204ENST00000532550 BBXQ8WY36 941 aaPredicted RBP19.49■□□□□ 0.71
PHRF1-204ENST00000532550 ARNTL2Q8WYA1 636 aa19.49■□□□□ 0.71
PHRF1-204ENST00000532550 PHF20Q9BVI0 1012 aa19.49■□□□□ 0.71
PHRF1-204ENST00000532550 GABBR1Q9UBS5 961 aa19.49■□□□□ 0.71
PHRF1-204ENST00000532550 INSL6Q9Y581 213 aa19.49■□□□□ 0.71
PHRF1-204ENST00000532550 MAFBQ9Y5Q3 323 aaPredicted RBP19.49■□□□□ 0.71
PHRF1-204ENST00000532550 MICAL3Q7RTP6 2002 aa19.49■□□□□ 0.71
PHRF1-204ENST00000532550 COL1A2P08123 1366 aa19.48■□□□□ 0.71
PHRF1-204ENST00000532550 CCDC194A0A1B0GVG4 234 aa19.48■□□□□ 0.71
PHRF1-204ENST00000532550 SMIM35A0A1B0GVV1 85 aa19.48■□□□□ 0.71
PHRF1-204ENST00000532550 LCHNA4D1U4 455 aa19.48■□□□□ 0.71
PHRF1-204ENST00000532550 CTDNEP1O95476 244 aa19.48■□□□□ 0.71
PHRF1-204ENST00000532550 ATP4AP20648 1035 aa19.48■□□□□ 0.71
PHRF1-204ENST00000532550 MKRN4PQ13434 485 aaPredicted RBP19.48■□□□□ 0.71
PHRF1-204ENST00000532550 LPIN1Q14693 890 aa19.48■□□□□ 0.71
PHRF1-204ENST00000532550 NPY5RQ15761 445 aa19.48■□□□□ 0.71
PHRF1-204ENST00000532550 FBXO47Q5MNV8 452 aa19.48■□□□□ 0.71
PHRF1-204ENST00000532550 LRCH2Q5VUJ6 765 aa19.48■□□□□ 0.71
PHRF1-204ENST00000532550 TRMT1LQ7Z2T5 733 aaKnown RBP19.48■□□□□ 0.71
PHRF1-204ENST00000532550 SLC5A5Q92911 643 aa19.48■□□□□ 0.71
PHRF1-204ENST00000532550 TOP1MTQ969P6 601 aa19.48■□□□□ 0.71
PHRF1-204ENST00000532550 TEKT3Q9BXF9 490 aa19.48■□□□□ 0.71
PHRF1-204ENST00000532550 DISC1Q9NRI5 854 aa19.48■□□□□ 0.71
PHRF1-204ENST00000532550 RFXAPO00287 272 aa19.47■□□□□ 0.71
PHRF1-204ENST00000532550 DTNBO60941 627 aa19.47■□□□□ 0.71
PHRF1-204ENST00000532550 UPP2O95045 317 aa19.47■□□□□ 0.71
PHRF1-204ENST00000532550 TDP2O95551 362 aa19.47■□□□□ 0.71
PHRF1-204ENST00000532550 TMEM62Q0P6H9 643 aa19.47■□□□□ 0.71
PHRF1-204ENST00000532550 CCDC85BQ15834 202 aaPredicted RBP19.47■□□□□ 0.71
PHRF1-204ENST00000532550 INF2Q27J81 1249 aa19.47■□□□□ 0.71
PHRF1-204ENST00000532550 MOXD1Q6UVY6 613 aa19.47■□□□□ 0.71
PHRF1-204ENST00000532550 USP38Q8NB14 1042 aa19.47■□□□□ 0.71
PHRF1-204ENST00000532550 GTF3C6Q969F1 213 aa19.47■□□□□ 0.71
PHRF1-204ENST00000532550 NRBP2Q9NSY0 501 aa19.47■□□□□ 0.71
PHRF1-204ENST00000532550 TRPV2Q9Y5S1 764 aa19.47■□□□□ 0.71
PHRF1-204ENST00000532550 SQORQ9Y6N5 450 aa19.47■□□□□ 0.71
PHRF1-204ENST00000532550 EVPLQ92817 2033 aa19.47■□□□□ 0.71
PHRF1-204ENST00000532550 A0A0C4DFX4 3053 aa19.47■□□□□ 0.71
PHRF1-204ENST00000532550 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.46■□□□□ 0.71
PHRF1-204ENST00000532550 CHMP2AO43633 222 aa19.46■□□□□ 0.71
PHRF1-204ENST00000532550 GTPBP6O43824 516 aaPredicted RBP19.46■□□□□ 0.71
PHRF1-204ENST00000532550 ARHGEF15O94989 841 aa19.46■□□□□ 0.71
PHRF1-204ENST00000532550 SFNP31947 248 aa19.46■□□□□ 0.71
PHRF1-204ENST00000532550 JAK3P52333 1124 aa19.46■□□□□ 0.71
PHRF1-204ENST00000532550 LETM2Q2VYF4 491 aa19.46■□□□□ 0.71
PHRF1-204ENST00000532550 TSHZ1Q6ZSZ6 1077 aa19.46■□□□□ 0.71
PHRF1-204ENST00000532550 FAM167AQ96KS9 214 aa19.46■□□□□ 0.71
PHRF1-204ENST00000532550 CELF4Q9BZC1 486 aaKnown RBP19.46■□□□□ 0.71
PHRF1-204ENST00000532550 GJB4Q9NTQ9 266 aa19.46■□□□□ 0.71
PHRF1-204ENST00000532550 CEP131Q9UPN4 1083 aa19.46■□□□□ 0.71
PHRF1-204ENST00000532550 DLL1O00548 723 aa19.45■□□□□ 0.7
PHRF1-204ENST00000532550 PSMD10O75832 226 aa19.45■□□□□ 0.7
PHRF1-204ENST00000532550 LARGE1O95461 756 aa19.45■□□□□ 0.7
PHRF1-204ENST00000532550 HTRA4P83105 476 aaPredicted RBP19.45■□□□□ 0.7
PHRF1-204ENST00000532550 GJA10Q969M2 543 aa19.45■□□□□ 0.7
PHRF1-204ENST00000532550 MBOAT7Q96N66 472 aa19.45■□□□□ 0.7
PHRF1-204ENST00000532550 TGS1Q96RS0 853 aaKnown RBP19.45■□□□□ 0.7
PHRF1-204ENST00000532550 YME1L1Q96TA2 773 aa19.45■□□□□ 0.7
PHRF1-204ENST00000532550 UNC45AQ9H3U1 944 aa19.45■□□□□ 0.7
PHRF1-204ENST00000532550 BRMS1Q9HCU9 246 aa19.45■□□□□ 0.7
PHRF1-204ENST00000532550 DDX25Q9UHL0 483 aaKnown RBP19.45■□□□□ 0.7
PHRF1-204ENST00000532550 EYSQ5T1H1 3165 aa19.44■□□□□ 0.7
PHRF1-204ENST00000532550 LINC01553A4QN01 128 aa19.44■□□□□ 0.7
PHRF1-204ENST00000532550 ENPP3O14638 875 aa19.44■□□□□ 0.7
PHRF1-204ENST00000532550 FDPSP14324 419 aaKnown RBP19.44■□□□□ 0.7
PHRF1-204ENST00000532550 POU3F3P20264 500 aaPredicted RBP19.44■□□□□ 0.7
PHRF1-204ENST00000532550 CD52P31358 61 aa19.44■□□□□ 0.7
PHRF1-204ENST00000532550 PIK3AP1Q6ZUJ8 805 aa19.44■□□□□ 0.7
PHRF1-204ENST00000532550 MIER3Q7Z3K6 550 aa19.44■□□□□ 0.7
PHRF1-204ENST00000532550 NEK8Q86SG6 692 aa19.44■□□□□ 0.7
PHRF1-204ENST00000532550 KIAA0319LQ8IZA0 1049 aa19.44■□□□□ 0.7
PHRF1-204ENST00000532550 MICALL1Q8N3F8 863 aa19.44■□□□□ 0.7
PHRF1-204ENST00000532550 METTL13Q8N6R0 699 aa19.44■□□□□ 0.7
PHRF1-204ENST00000532550 RDM1Q8NG50 284 aa19.44■□□□□ 0.7
PHRF1-204ENST00000532550 NAP1L4Q99733 375 aaKnown RBP19.44■□□□□ 0.7
PHRF1-204ENST00000532550 AGO3Q9H9G7 860 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms