RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 ANTXR2P58335 489 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 EPHA7Q15375 998 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 SPECC1LQ69YQ0 1117 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 SCN4BQ8IWT1 228 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 CCDC63Q8NA47 563 aa8.67□□□□□ -1.02
CTNND1-230ENST00000532245 BBXQ8WY36 941 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-230ENST00000532245 SECISBP2LQ93073 1101 aaKnown RBP8.67□□□□□ -1.02
CTNND1-230ENST00000532245 ATP8B3O60423 1300 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 GOLGA8SH3BPF8 625 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 CXCL11O14625 94 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 CALCOCO2Q13137 446 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 BSPRYQ5W0U4 402 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 SYT10Q6XYQ8 523 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 LEKR1Q6ZMV7 388 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 UBE2TQ9NPD8 197 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-230ENST00000532245 MAN1B1Q9UKM7 699 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 ATP11BQ9Y2G3 1177 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 TMX2Q9Y320 296 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 XRCC6P12956 609 aaKnown RBP eCLIP8.66□□□□□ -1.022e-8■□□□□ 8.5
CTNND1-230ENST00000532245 CUL4BQ13620 913 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 ZNF394Q53GI3 561 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 IER5Q5VY09 327 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 TMTC1Q8IUR5 882 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 SIX6OS1Q8N1H7 587 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 ELMOD1Q8N336 334 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 NME8Q8N427 588 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 IFIH1Q9BYX4 1025 aaKnown RBP8.66□□□□□ -1.02
CTNND1-230ENST00000532245 EHD4Q9H223 541 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 AK9Q5TCS8 1911 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 CYP2C9P11712 490 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 ZNF365Q70YC5 407 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 P2RX7Q99572 595 aaKnown RBP8.66□□□□□ -1.02
CTNND1-230ENST00000532245 MRPL4Q9BYD3 311 aaKnown RBP8.66□□□□□ -1.02
CTNND1-230ENST00000532245 HAUS2Q9NVX0 235 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 SEPT10Q9P0V9 454 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 PPP1R9AQ9ULJ8 1098 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 FMN2Q9NZ56 1722 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 SMIM23A6NLE4 172 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 MAP2K1Q02750 393 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-230ENST00000532245 PSMD2Q13200 908 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 RGMBQ6NW40 437 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 PEX26Q7Z412 305 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 BEST2Q8NFU1 509 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 ZBTB9Q96C00 473 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 ERO1AQ96HE7 468 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 GCNT4Q9P109 453 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 SALL1Q9NSC2 1324 aa8.66□□□□□ -1.02
CTNND1-230ENST00000532245 POLR1AO95602 1720 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-230ENST00000532245 FAM205CA6NFA0 338 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 CEP104O60308 925 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 HUS1O60921 280 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 RPS6KA5O75582 802 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 COPB1P53618 953 aaKnown RBP8.65□□□□□ -1.02
CTNND1-230ENST00000532245 BPIFB4P59827 614 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 GRIK5Q16478 980 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 HADHQ16836 314 aaKnown RBP8.65□□□□□ -1.02
CTNND1-230ENST00000532245 XKR3Q5GH77 459 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 PHLDB2Q86SQ0 1253 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.65□□□□□ -1.02
CTNND1-230ENST00000532245 PAIP2Q9BPZ3 127 aaKnown RBP8.65□□□□□ -1.02
CTNND1-230ENST00000532245 SPATC1LQ9H0A9 340 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 ASCC2Q9H1I8 757 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-230ENST00000532245 MAD2L2Q9UI95 211 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 TAF6LQ9Y6J9 622 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 DCDC2CA8MYV0 355 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 MYL1P05976 194 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 PPATQ06203 517 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 LAMC2Q13753 1193 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 PTPN21Q16825 1174 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 ZNF667Q5HYK9 610 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 ARMCX2Q7L311 632 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 TTC30AQ86WT1 665 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 RYBPQ8N488 228 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-230ENST00000532245 LRRC71Q8N4P6 559 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 CCDC77Q9BR77 488 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 TSKSQ9UJT2 592 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 ANAPC4Q9UJX5 808 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 ZNF541Q9H0D2 1346 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 STXBP3O00186 592 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 HIP1RO75146 1068 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 ATP2A2P16615 1042 aaKnown RBP8.65□□□□□ -1.02
CTNND1-230ENST00000532245 TAL1P17542 331 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-230ENST00000532245 GPC3P51654 580 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 NOLC1Q14978 699 aaKnown RBP eCLIP8.65□□□□□ -1.02
CTNND1-230ENST00000532245 UAP1Q16222 522 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-230ENST00000532245 CERS5Q8N5B7 392 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 ARRDC4Q8NCT1 418 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 MRRFQ96E11 262 aaKnown RBP8.65□□□□□ -1.02
CTNND1-230ENST00000532245 MXRA8Q9BRK3 442 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 ADAMTSL3P82987 1691 aa8.65□□□□□ -1.02
CTNND1-230ENST00000532245 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.65□□□□□ -1.03
CTNND1-230ENST00000532245 RNF8O76064 485 aa8.65□□□□□ -1.03
CTNND1-230ENST00000532245 SHMT1P34896 483 aa8.65□□□□□ -1.03
CTNND1-230ENST00000532245 TCF7P36402 384 aaPredicted RBP8.65□□□□□ -1.03
CTNND1-230ENST00000532245 OR8K1Q8NGG5 319 aa8.65□□□□□ -1.03
CTNND1-230ENST00000532245 RNF139Q8WU17 664 aa8.65□□□□□ -1.03
CTNND1-230ENST00000532245 SAAL1Q96ER3 474 aa8.65□□□□□ -1.03
CTNND1-230ENST00000532245 PPANQ9NQ55 473 aaKnown RBP8.65□□□□□ -1.03
CTNND1-230ENST00000532245 KCNH7Q9NS40 1196 aa8.65□□□□□ -1.03
CTNND1-230ENST00000532245 TMEM88BA6NKF7 163 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms