RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 ATP2A2P16615 1042 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 ITGA6P23229 1130 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 HNF4AP41235 474 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 CLCN2P51788 898 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 SLC12A2P55011 1212 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 NRG1Q02297 640 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 MLECQ14165 292 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 TNIP1Q15025 636 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 SMAD1Q15797 465 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 ZNF362Q5T0B9 420 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 JMJD6Q6NYC1 403 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 RAPH1Q70E73 1250 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 TRIML1Q8N9V2 468 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 ATG16L2Q8NAA4 619 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 PPP1R14CQ8TAE6 165 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 HTRA1Q92743 480 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 LRCH3Q96II8 777 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 OSMRQ99650 979 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 C7orf25Q9BPX7 421 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 ZNF576Q9H609 170 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 KCNH4Q9UQ05 1017 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 TRAF6Q9Y4K3 522 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 PCDHA9Q9Y5H5 950 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 RSF1Q96T23 1441 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 CCDC66A2RUB6 948 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 F8W031 263 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 TRAF5O00463 557 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 DNAJA2O60884 412 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 SOAT2O75908 522 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 GOSR1O95249 250 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 GUCA1CO95843 209 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 FSHRP23945 695 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 MC4RP32245 332 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 PSEN2P49810 448 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 ADKP55263 362 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 RAC1P63000 192 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 LRRC74AQ0VAA2 488 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 CUL4AQ13619 759 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 LRP8Q14114 963 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 SEMA3AQ14563 771 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 LRRC14Q15048 493 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 TAF7Q15545 349 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 NTRK3Q16288 839 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 BROXQ5VW32 411 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 CDCP2Q5VXM1 449 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 PPFIBP1Q86W92 1011 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 ZNF619Q8N2I2 560 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 GALNT15Q8N3T1 639 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 BORCS6Q96GS4 357 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 C7orf26Q96N11 449 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 GAS2L1Q99501 681 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 PAIP2Q9BPZ3 127 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 LRFN3Q9BTN0 628 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 C2orf40Q9H1Z8 148 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 SPON1Q9HCB6 807 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 REV1Q9UBZ9 1251 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 SIK3Q9Y2K2 1263 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 WDR64B1ANS9 1081 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 PI4K2BG5E9Z4 385 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 FYB1O15117 783 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 SLC7A4O43246 635 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 FGF18O76093 207 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 EGFRP00533 1210 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 CLTBP09497 229 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 HNRNPLP14866 589 aaKnown RBP eCLIP5.88□□□□□ -1.471e-9■□□□□ 8.8
ECHDC1-222ENST00000531967 ENPP1P22413 925 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 HOXD13P35453 343 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 ITGA8P53708 1063 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 CLN3Q13286 438 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 RASA2Q15283 850 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 FAM110CQ1W6H9 321 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 BBS9Q3SYG4 887 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 C5orf22Q49AR2 442 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 KRTCAP3Q53RY4 240 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 CCDC91Q7Z6B0 441 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 SLC9B2Q86UD5 537 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 AVL9Q8NBF6 648 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 MAELQ96JY0 434 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 CNDP2Q96KP4 475 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 TRERF1Q96PN7 1200 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 SLC4A5Q9BY07 1137 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 CNTD2Q9H8S5 307 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 CCM2LQ9NUG4 571 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 HPF1Q9NWY4 346 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 TMOD4Q9NZQ9 345 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 LRFN1Q9P244 771 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 CORINQ9Y5Q5 1042 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 ZFP37Q9Y6Q3 630 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 NACADO15069 1562 aa5.88□□□□□ -1.47
ECHDC1-222ENST00000531967 CAPN8A6NHC0 703 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 KRT13P13646 458 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 ACPPP15309 386 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 NME2P22392 152 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 ALAS2P22557 587 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 HSPA4P34932 840 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 HADHAP40939 763 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 CTCFP49711 727 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 ERV3-1Q14264 604 aa5.87□□□□□ -1.47
ECHDC1-222ENST00000531967 FBXO47Q5MNV8 452 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms