RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 SLC37A4O43826 429 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 HBP1O60381 514 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 GAS7O60861 476 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 ACTN1P12814 892 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 INSRRP14616 1297 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 ATP4AP20648 1035 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 U2AF2P26368 475 aaKnown RBP eCLIP12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 JAK3P52333 1124 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 PPFIA1Q13136 1202 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 PPP2R5CQ13362 524 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 CUL4AQ13619 759 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 GRIN2CQ14957 1233 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 GRIK4Q16099 956 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 FAM26DQ5JW98 314 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 SWSAP1Q6NVH7 229 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 LRRC8DQ7L1W4 858 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 FAM184AQ8NB25 1140 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 BBXQ8WY36 941 aaPredicted RBP12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 HAS1Q92839 578 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 TEKT3Q9BXF9 490 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 ZNF302Q9NR11 478 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 POTEB3A0JP26 581 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 FAM205CA6NFA0 338 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 ZBBXA8MT70 800 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 GRXCR1A8MXD5 290 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 DDX39AO00148 427 aaKnown RBP12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 CCNT1O60563 726 aaKnown RBP12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 PBX2P40425 430 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 TRAPPC10P48553 1259 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 MBTPS1Q14703 1052 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 ZNF484Q5JVG2 852 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 ZNF618Q5T7W0 954 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 POTEBQ6S5H4 581 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 FAM43BQ6ZT52 329 aaPredicted RBP12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 DEFB128Q7Z7B8 93 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 SLFN12Q8IYM2 578 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 FAM167AQ96KS9 214 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 GAS2L1Q99501 681 aaPredicted RBP12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 FTOQ9C0B1 505 aaKnown RBP eCLIP12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 UNC45AQ9H3U1 944 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 SLC28A3Q9HAS3 691 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 CXXC1Q9P0U4 656 aaPredicted RBP12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 TCEAL9Q9UHQ7 104 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 TUBE1Q9UJT0 475 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 VAV3Q9UKW4 847 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 PCDHA2Q9Y5H9 948 aa12.2□□□□□ -0.46
GPATCH4-216ENST00000531900 SMIM35A0A1B0GVV1 85 aa12.19□□□□□ -0.46
GPATCH4-216ENST00000531900 RSPH10B2B2RC85 870 aa12.19□□□□□ -0.46
GPATCH4-216ENST00000531900 ZBTB42B2RXF5 422 aa12.19□□□□□ -0.46
GPATCH4-216ENST00000531900 BACH1O14867 736 aa12.19□□□□□ -0.46
GPATCH4-216ENST00000531900 NBNO60934 754 aa12.19□□□□□ -0.46
GPATCH4-216ENST00000531900 BAIAP3O94812 1187 aa12.19□□□□□ -0.46
GPATCH4-216ENST00000531900 RSPH10BP0C881 870 aa12.19□□□□□ -0.46
GPATCH4-216ENST00000531900 MARK3P27448 753 aa12.19□□□□□ -0.46
GPATCH4-216ENST00000531900 SPIRE1Q08AE8 756 aa12.19□□□□□ -0.46
GPATCH4-216ENST00000531900 PDXDC2PQ6P474 469 aa12.19□□□□□ -0.46
GPATCH4-216ENST00000531900 NOSTRINQ8IVI9 506 aa12.19□□□□□ -0.46
GPATCH4-216ENST00000531900 NME8Q8N427 588 aa12.19□□□□□ -0.46
GPATCH4-216ENST00000531900 MTMR9Q96QG7 549 aa12.19□□□□□ -0.46
GPATCH4-216ENST00000531900 CEP131Q9UPN4 1083 aa12.19□□□□□ -0.46
GPATCH4-216ENST00000531900 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.19□□□□□ -0.46
GPATCH4-216ENST00000531900 SQORQ9Y6N5 450 aa12.19□□□□□ -0.46
GPATCH4-216ENST00000531900 ZNF862O60290 1169 aa12.18□□□□□ -0.46
GPATCH4-216ENST00000531900 STBD1O95210 358 aa12.18□□□□□ -0.46
GPATCH4-216ENST00000531900 ATP2A2P16615 1042 aaKnown RBP12.18□□□□□ -0.46
GPATCH4-216ENST00000531900 THPOP40225 353 aa12.18□□□□□ -0.46
GPATCH4-216ENST00000531900 MKRN4PQ13434 485 aaPredicted RBP12.18□□□□□ -0.46
GPATCH4-216ENST00000531900 MTHFD1LQ6UB35 978 aa12.18□□□□□ -0.46
GPATCH4-216ENST00000531900 MIER3Q7Z3K6 550 aa12.18□□□□□ -0.46
GPATCH4-216ENST00000531900 POTEDQ86YR6 584 aa12.18□□□□□ -0.46
GPATCH4-216ENST00000531900 GJA10Q969M2 543 aa12.18□□□□□ -0.46
GPATCH4-216ENST00000531900 SNX21Q969T3 373 aa12.18□□□□□ -0.46
GPATCH4-216ENST00000531900 INTS4Q96HW7 963 aaKnown RBP12.18□□□□□ -0.46
GPATCH4-216ENST00000531900 UIMC1Q96RL1 719 aa12.18□□□□□ -0.46
GPATCH4-216ENST00000531900 NIFKQ9BYG3 293 aaKnown RBP12.18□□□□□ -0.46
GPATCH4-216ENST00000531900 NKX2-4Q9H2Z4 354 aa12.18□□□□□ -0.46
GPATCH4-216ENST00000531900 GABBR1Q9UBS5 961 aa12.18□□□□□ -0.46
GPATCH4-216ENST00000531900 TRPC6Q9Y210 931 aa12.18□□□□□ -0.46
GPATCH4-216ENST00000531900 SAMM50Q9Y512 469 aa12.18□□□□□ -0.46
GPATCH4-216ENST00000531900 PCDHA11Q9Y5I1 949 aa12.18□□□□□ -0.46
GPATCH4-216ENST00000531900 LOXHD1Q8IVV2 1947 aa12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 KDM3AQ9Y4C1 1321 aa12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 MICAL3Q7RTP6 2002 aa12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 SIP14410 1827 aa12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 WNT7AO00755 349 aa12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 EFCAB14O75071 495 aa12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 BAG4O95429 457 aaKnown RBP12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 CHRNA1P02708 482 aa12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 GJB2P29033 226 aa12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 GUCY1B3Q02153 619 aa12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 MGAT3Q09327 533 aa12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 EPHA7Q15375 998 aa12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 TARBP2Q15633 366 aaKnown RBP12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 PLEKHG4Q58EX7 1191 aa12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 CNKSR3Q6P9H4 555 aa12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 RUFY4Q6ZNE9 571 aa12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 RSPH3Q86UC2 560 aa12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 ZNF710Q8N1W2 664 aa12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 PHOSPHO2Q8TCD6 241 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms