RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 CTSHP09668 335 aa18.33■□□□□ 0.52
RELA-216ENST00000531238 GCFC2P16383 781 aaKnown RBP18.33■□□□□ 0.52
RELA-216ENST00000531238 SMAD3P84022 425 aaKnown RBP18.33■□□□□ 0.52
RELA-216ENST00000531238 FAM26DQ5JW98 314 aa18.33■□□□□ 0.52
RELA-216ENST00000531238 TRMT1LQ7Z2T5 733 aaKnown RBP18.33■□□□□ 0.52
RELA-216ENST00000531238 RPAINQ86UA6 219 aa18.33■□□□□ 0.52
RELA-216ENST00000531238 FAM184AQ8NB25 1140 aa18.33■□□□□ 0.52
RELA-216ENST00000531238 TUBE1Q9UJT0 475 aa18.33■□□□□ 0.52
RELA-216ENST00000531238 SAMM50Q9Y512 469 aa18.33■□□□□ 0.52
RELA-216ENST00000531238 PFKMP08237 780 aa18.32■□□□□ 0.52
RELA-216ENST00000531238 KLRC1P26715 233 aa18.32■□□□□ 0.52
RELA-216ENST00000531238 PBX2P40425 430 aa18.32■□□□□ 0.52
RELA-216ENST00000531238 MCM2P49736 904 aa18.32■□□□□ 0.52
RELA-216ENST00000531238 MGAT3Q09327 533 aa18.32■□□□□ 0.52
RELA-216ENST00000531238 MTHFD1LQ6UB35 978 aa18.32■□□□□ 0.52
RELA-216ENST00000531238 FAM20AQ96MK3 541 aa18.32■□□□□ 0.52
RELA-216ENST00000531238 PCDHA2Q9Y5H9 948 aa18.32■□□□□ 0.52
RELA-216ENST00000531238 IGSF9BQ9UPX0 1349 aa18.31■□□□□ 0.52
RELA-216ENST00000531238 SLC34A2O95436 690 aa18.31■□□□□ 0.52
RELA-216ENST00000531238 SFNP31947 248 aa18.31■□□□□ 0.52
RELA-216ENST00000531238 SPIRE1Q08AE8 756 aa18.31■□□□□ 0.52
RELA-216ENST00000531238 PPP2R5CQ13362 524 aa18.31■□□□□ 0.52
RELA-216ENST00000531238 GPR153Q6NV75 609 aa18.31■□□□□ 0.52
RELA-216ENST00000531238 MIER3Q7Z3K6 550 aa18.31■□□□□ 0.52
RELA-216ENST00000531238 TMEM60Q9H2L4 133 aa18.31■□□□□ 0.52
RELA-216ENST00000531238 FOXP1Q9H334 677 aaPredicted RBP18.31■□□□□ 0.52
RELA-216ENST00000531238 COL6A3P12111 3177 aa18.31■□□□□ 0.52
RELA-216ENST00000531238 TBX3O15119 743 aa18.3■□□□□ 0.52
RELA-216ENST00000531238 CAND2O75155 1236 aa18.3■□□□□ 0.52
RELA-216ENST00000531238 PARNO95453 639 aaKnown RBP18.3■□□□□ 0.52
RELA-216ENST00000531238 ATP2B1P20020 1258 aa18.3■□□□□ 0.52
RELA-216ENST00000531238 GJB2P29033 226 aa18.3■□□□□ 0.52
RELA-216ENST00000531238 JAK3P52333 1124 aa18.3■□□□□ 0.52
RELA-216ENST00000531238 CUL4AQ13619 759 aa18.3■□□□□ 0.52
RELA-216ENST00000531238 SAFBQ15424 915 aaKnown RBP eCLIP18.3■□□□□ 0.52
RELA-216ENST00000531238 PLEKHG4Q58EX7 1191 aa18.3■□□□□ 0.52
RELA-216ENST00000531238 ZNF484Q5JVG2 852 aa18.3■□□□□ 0.52
RELA-216ENST00000531238 TAF2Q6P1X5 1199 aa18.3■□□□□ 0.52
RELA-216ENST00000531238 CKAP2LQ8IYA6 745 aa18.3■□□□□ 0.52
RELA-216ENST00000531238 DBF4BQ8NFT6 615 aa18.3■□□□□ 0.52
RELA-216ENST00000531238 BBXQ8WY36 941 aaPredicted RBP18.3■□□□□ 0.52
RELA-216ENST00000531238 MTMR9Q96QG7 549 aa18.3■□□□□ 0.52
RELA-216ENST00000531238 NAP1L4Q99733 375 aaKnown RBP18.3■□□□□ 0.52
RELA-216ENST00000531238 PBX4Q9BYU1 374 aa18.3■□□□□ 0.52
RELA-216ENST00000531238 FAM49AQ9H0Q0 323 aaPredicted RBP18.3■□□□□ 0.52
RELA-216ENST00000531238 SLC4A7Q9Y6M7 1214 aa18.3■□□□□ 0.52
RELA-216ENST00000531238 KAT6AQ92794 2004 aa18.3■□□□□ 0.52
RELA-216ENST00000531238 TANC1Q9C0D5 1861 aa18.29■□□□□ 0.52
RELA-216ENST00000531238 SMIM35A0A1B0GVV1 85 aa18.29■□□□□ 0.52
RELA-216ENST00000531238 TMEM150BA6NC51 233 aa18.29■□□□□ 0.52
RELA-216ENST00000531238 ZBBXA8MT70 800 aa18.29■□□□□ 0.52
RELA-216ENST00000531238 U2AF2P26368 475 aaKnown RBP eCLIP18.29■□□□□ 0.52
RELA-216ENST00000531238 TOB1P50616 345 aaPredicted RBP18.29■□□□□ 0.52
RELA-216ENST00000531238 RABGGTBP53611 331 aa18.29■□□□□ 0.52
RELA-216ENST00000531238 TMEM62Q0P6H9 643 aa18.29■□□□□ 0.52
RELA-216ENST00000531238 MKRN4PQ13434 485 aaPredicted RBP18.29■□□□□ 0.52
RELA-216ENST00000531238 CNKSR3Q6P9H4 555 aa18.29■□□□□ 0.52
RELA-216ENST00000531238 KIAA0319LQ8IZA0 1049 aa18.29■□□□□ 0.52
RELA-216ENST00000531238 BANK1Q8NDB2 785 aa18.29■□□□□ 0.52
RELA-216ENST00000531238 RDM1Q8NG50 284 aa18.29■□□□□ 0.52
RELA-216ENST00000531238 TNPO1Q92973 898 aaKnown RBP18.29■□□□□ 0.52
RELA-216ENST00000531238 CEP89Q96ST8 783 aa18.29■□□□□ 0.52
RELA-216ENST00000531238 TTYH1Q9H313 450 aaPredicted RBP18.29■□□□□ 0.52
RELA-216ENST00000531238 WRAP73Q9P2S5 460 aaPredicted RBP18.29■□□□□ 0.52
RELA-216ENST00000531238 TCEAL9Q9UHQ7 104 aa18.29■□□□□ 0.52
RELA-216ENST00000531238 CHD7Q9P2D1 2997 aa18.29■□□□□ 0.52
RELA-216ENST00000531238 C22orf31O95567 290 aa18.28■□□□□ 0.52
RELA-216ENST00000531238 OATP04181 439 aa18.28■□□□□ 0.52
RELA-216ENST00000531238 ACTN1P12814 892 aa18.28■□□□□ 0.52
RELA-216ENST00000531238 MYOGP15173 224 aa18.28■□□□□ 0.52
RELA-216ENST00000531238 PRKCEQ02156 737 aa18.28■□□□□ 0.52
RELA-216ENST00000531238 NBR1Q14596 966 aa18.28■□□□□ 0.52
RELA-216ENST00000531238 TARBP2Q15633 366 aaKnown RBP18.28■□□□□ 0.52
RELA-216ENST00000531238 ZNF174Q15697 407 aa18.28■□□□□ 0.52
RELA-216ENST00000531238 TMCO2Q7Z6W1 182 aaPredicted RBP18.28■□□□□ 0.52
RELA-216ENST00000531238 NOSTRINQ8IVI9 506 aa18.28■□□□□ 0.52
RELA-216ENST00000531238 DEFB123Q8N688 67 aa18.28■□□□□ 0.52
RELA-216ENST00000531238 SH2D3AQ9BRG2 576 aa18.28■□□□□ 0.52
RELA-216ENST00000531238 SEMA6BQ9H3T3 888 aa18.28■□□□□ 0.52
RELA-216ENST00000531238 CDHR5Q9HBB8 845 aa18.28■□□□□ 0.52
RELA-216ENST00000531238 YBX2Q9Y2T7 364 aaKnown RBP18.28■□□□□ 0.52
RELA-216ENST00000531238 CDY2AQ9Y6F7 541 aa18.28■□□□□ 0.52
RELA-216ENST00000531238 COL1A2P08123 1366 aa18.28■□□□□ 0.52
RELA-216ENST00000531238 MCM7P33993 719 aa18.27■□□□□ 0.52
RELA-216ENST00000531238 WDR5P61964 334 aaKnown RBP18.27■□□□□ 0.52
RELA-216ENST00000531238 DEFB103AP81534 67 aa18.27■□□□□ 0.52
RELA-216ENST00000531238 LPIN1Q14693 890 aa18.27■□□□□ 0.52
RELA-216ENST00000531238 CALCRLQ16602 461 aa18.27■□□□□ 0.52
RELA-216ENST00000531238 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.27■□□□□ 0.52
RELA-216ENST00000531238 C4orf32Q8N8J7 132 aa18.27■□□□□ 0.52
RELA-216ENST00000531238 FAM161BQ96MY7 647 aa18.27■□□□□ 0.52
RELA-216ENST00000531238 NIFKQ9BYG3 293 aaKnown RBP18.27■□□□□ 0.52
RELA-216ENST00000531238 NRBP2Q9NSY0 501 aa18.27■□□□□ 0.52
RELA-216ENST00000531238 MTMR10Q9NXD2 777 aa18.27■□□□□ 0.52
RELA-216ENST00000531238 RGL1Q9NZL6 768 aa18.27■□□□□ 0.52
RELA-216ENST00000531238 EYSQ5T1H1 3165 aa18.26■□□□□ 0.51
RELA-216ENST00000531238 ZBTB39O15060 712 aa18.26■□□□□ 0.51
RELA-216ENST00000531238 MARCH6O60337 910 aa18.26■□□□□ 0.51
RELA-216ENST00000531238 NEMFO60524 1076 aa18.26■□□□□ 0.51
RELA-216ENST00000531238 BAIAP3O94812 1187 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms