RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 CTTNQ14247 550 aaKnown RBP23.93■■□□□ 1.42
CAPN1-220ENST00000530567 NEK9Q8TD19 979 aa23.93■■□□□ 1.42
CAPN1-220ENST00000530567 LMBR1Q8WVP7 490 aa23.93■■□□□ 1.42
CAPN1-220ENST00000530567 MMTAG2Q9BU76 263 aaKnown RBP23.93■■□□□ 1.42
CAPN1-220ENST00000530567 SETD4Q9NVD3 440 aa23.93■■□□□ 1.42
CAPN1-220ENST00000530567 LRWD1Q9UFC0 647 aa23.93■■□□□ 1.42
CAPN1-220ENST00000530567 TRPC6Q9Y210 931 aa23.93■■□□□ 1.42
CAPN1-220ENST00000530567 HBP1O60381 514 aa23.92■■□□□ 1.42
CAPN1-220ENST00000530567 MED24O75448 989 aa23.92■■□□□ 1.42
CAPN1-220ENST00000530567 INSRRP14616 1297 aa23.92■■□□□ 1.42
CAPN1-220ENST00000530567 FAAP100Q0VG06 881 aa23.92■■□□□ 1.42
CAPN1-220ENST00000530567 GRIK4Q16099 956 aa23.92■■□□□ 1.42
CAPN1-220ENST00000530567 CKAP2LQ8IYA6 745 aa23.92■■□□□ 1.42
CAPN1-220ENST00000530567 BBXQ8WY36 941 aaPredicted RBP23.92■■□□□ 1.42
CAPN1-220ENST00000530567 FAM167AQ96KS9 214 aa23.92■■□□□ 1.42
CAPN1-220ENST00000530567 RAB34Q9BZG1 259 aa23.92■■□□□ 1.42
CAPN1-220ENST00000530567 SRPRBQ9Y5M8 271 aaKnown RBP23.92■■□□□ 1.42
CAPN1-220ENST00000530567 NRCAMQ92823 1304 aa23.91■■□□□ 1.42
CAPN1-220ENST00000530567 KAT6AQ92794 2004 aa23.91■■□□□ 1.42
CAPN1-220ENST00000530567 C17orf102A2RUQ5 167 aa23.91■■□□□ 1.42
CAPN1-220ENST00000530567 TMEM150BA6NC51 233 aa23.91■■□□□ 1.42
CAPN1-220ENST00000530567 LYPLA2O95372 231 aa23.91■■□□□ 1.42
CAPN1-220ENST00000530567 CDC25AP30304 524 aa23.91■■□□□ 1.42
CAPN1-220ENST00000530567 STK38Q15208 465 aa23.91■■□□□ 1.42
CAPN1-220ENST00000530567 MARCH8Q5T0T0 291 aa23.91■■□□□ 1.42
CAPN1-220ENST00000530567 CATSPER3Q86XQ3 398 aa23.91■■□□□ 1.42
CAPN1-220ENST00000530567 C4orf19Q8IY42 314 aa23.91■■□□□ 1.42
CAPN1-220ENST00000530567 POLR3CQ9BUI4 534 aaPredicted RBP23.91■■□□□ 1.42
CAPN1-220ENST00000530567 ZSWIM4Q9H7M6 989 aa23.91■■□□□ 1.42
CAPN1-220ENST00000530567 TUFT1Q9NNX1 390 aa23.91■■□□□ 1.42
CAPN1-220ENST00000530567 ATP6V1DQ9Y5K8 247 aa23.91■■□□□ 1.42
CAPN1-220ENST00000530567 TCHHQ07283 1943 aa23.91■■□□□ 1.42
CAPN1-220ENST00000530567 SPTLC2O15270 562 aa23.9■■□□□ 1.42
CAPN1-220ENST00000530567 RPA1P27694 616 aa23.9■■□□□ 1.42
CAPN1-220ENST00000530567 ECM1Q16610 540 aa23.9■■□□□ 1.42
CAPN1-220ENST00000530567 XKR3Q5GH77 459 aa23.9■■□□□ 1.42
CAPN1-220ENST00000530567 ANO5Q75V66 913 aa23.9■■□□□ 1.42
CAPN1-220ENST00000530567 TRMT1LQ7Z2T5 733 aaKnown RBP23.9■■□□□ 1.42
CAPN1-220ENST00000530567 TPH2Q8IWU9 490 aa23.9■■□□□ 1.42
CAPN1-220ENST00000530567 ERMNQ8TAM6 284 aa23.9■■□□□ 1.42
CAPN1-220ENST00000530567 TRAPPC12Q8WVT3 735 aa23.9■■□□□ 1.42
CAPN1-220ENST00000530567 PDLIM7Q9NR12 457 aa23.9■■□□□ 1.42
CAPN1-220ENST00000530567 CFAP45Q9UL16 551 aa23.9■■□□□ 1.42
CAPN1-220ENST00000530567 MBLAC1A4D2B0 266 aaPredicted RBP23.89■■□□□ 1.41
CAPN1-220ENST00000530567 DCDC2CA8MYV0 355 aa23.89■■□□□ 1.41
CAPN1-220ENST00000530567 PTGISQ16647 500 aa23.89■■□□□ 1.41
CAPN1-220ENST00000530567 HAUS3Q68CZ6 603 aa23.89■■□□□ 1.41
CAPN1-220ENST00000530567 C7orf61Q8IZ16 206 aa23.89■■□□□ 1.41
CAPN1-220ENST00000530567 SNX29Q8TEQ0 813 aa23.89■■□□□ 1.41
CAPN1-220ENST00000530567 ZBTB10Q96DT7 871 aa23.89■■□□□ 1.41
CAPN1-220ENST00000530567 AK8Q96MA6 479 aa23.89■■□□□ 1.41
CAPN1-220ENST00000530567 CLIC6Q96NY7 704 aa23.89■■□□□ 1.41
CAPN1-220ENST00000530567 CSRNP2Q9H175 543 aa23.89■■□□□ 1.41
CAPN1-220ENST00000530567 CHMP5Q9NZZ3 219 aa23.89■■□□□ 1.41
CAPN1-220ENST00000530567 TBX21Q9UL17 535 aa23.89■■□□□ 1.41
CAPN1-220ENST00000530567 COL1A2P08123 1366 aa23.89■■□□□ 1.41
CAPN1-220ENST00000530567 TNRC18O15417 2968 aaPredicted RBP23.89■■□□□ 1.41
CAPN1-220ENST00000530567 ZBTB39O15060 712 aa23.88■■□□□ 1.41
CAPN1-220ENST00000530567 TREHO43280 583 aa23.88■■□□□ 1.41
CAPN1-220ENST00000530567 DKC1O60832 514 aaKnown RBP eCLIP23.88■■□□□ 1.41
CAPN1-220ENST00000530567 PPP6R2O75170 966 aa23.88■■□□□ 1.41
CAPN1-220ENST00000530567 CLTBP09497 229 aa23.88■■□□□ 1.41
CAPN1-220ENST00000530567 LONP1P36776 959 aaKnown RBP23.88■■□□□ 1.41
CAPN1-220ENST00000530567 KRT85P78386 507 aa23.88■■□□□ 1.41
CAPN1-220ENST00000530567 TARBP2Q15633 366 aaKnown RBP23.88■■□□□ 1.41
CAPN1-220ENST00000530567 POTEGQ6S5H5 508 aa23.88■■□□□ 1.41
CAPN1-220ENST00000530567 SH3RF1Q7Z6J0 888 aa23.88■■□□□ 1.41
CAPN1-220ENST00000530567 KRI1Q8N9T8 703 aaKnown RBP23.88■■□□□ 1.41
CAPN1-220ENST00000530567 DHX38Q92620 1227 aaKnown RBP23.88■■□□□ 1.41
CAPN1-220ENST00000530567 WNT8BQ93098 351 aa23.88■■□□□ 1.41
CAPN1-220ENST00000530567 CEP89Q96ST8 783 aa23.88■■□□□ 1.41
CAPN1-220ENST00000530567 NIFKQ9BYG3 293 aaKnown RBP23.88■■□□□ 1.41
CAPN1-220ENST00000530567 SEPT9Q9UHD8 586 aaPredicted RBP23.88■■□□□ 1.41
CAPN1-220ENST00000530567 RCOR1Q9UKL0 485 aa23.88■■□□□ 1.41
CAPN1-220ENST00000530567 ARID2Q68CP9 1835 aa23.87■■□□□ 1.41
CAPN1-220ENST00000530567 RRN3P2A6NIE6 340 aa23.87■■□□□ 1.41
CAPN1-220ENST00000530567 TLR3O15455 904 aaKnown RBP23.87■■□□□ 1.41
CAPN1-220ENST00000530567 EVI5O60447 810 aa23.87■■□□□ 1.41
CAPN1-220ENST00000530567 CYP2C9P11712 490 aa23.87■■□□□ 1.41
CAPN1-220ENST00000530567 CCT6AP40227 531 aaKnown RBP23.87■■□□□ 1.41
CAPN1-220ENST00000530567 IGBP1P78318 339 aa23.87■■□□□ 1.41
CAPN1-220ENST00000530567 ZNF484Q5JVG2 852 aa23.87■■□□□ 1.41
CAPN1-220ENST00000530567 PLA2G4FQ68DD2 849 aa23.87■■□□□ 1.41
CAPN1-220ENST00000530567 SERINC5Q86VE9 423 aa23.87■■□□□ 1.41
CAPN1-220ENST00000530567 DPF3Q92784 378 aa23.87■■□□□ 1.41
CAPN1-220ENST00000530567 NRBP2Q9NSY0 501 aa23.87■■□□□ 1.41
CAPN1-220ENST00000530567 DDX11L8A8MPP1 907 aa23.86■■□□□ 1.41
CAPN1-220ENST00000530567 GNAT1P11488 350 aa23.86■■□□□ 1.41
CAPN1-220ENST00000530567 YWHABP31946 246 aaKnown RBP23.86■■□□□ 1.41
CAPN1-220ENST00000530567 KRT79Q5XKE5 535 aa23.86■■□□□ 1.41
CAPN1-220ENST00000530567 USP49Q70CQ1 688 aa23.86■■□□□ 1.41
CAPN1-220ENST00000530567 KCNG4Q8TDN1 519 aa23.86■■□□□ 1.41
CAPN1-220ENST00000530567 LEO1Q8WVC0 666 aaPredicted RBP23.86■■□□□ 1.41
CAPN1-220ENST00000530567 TNPO1Q92973 898 aaKnown RBP23.86■■□□□ 1.41
CAPN1-220ENST00000530567 SH2D3AQ9BRG2 576 aa23.86■■□□□ 1.41
CAPN1-220ENST00000530567 PCDH10Q9P2E7 1040 aa23.86■■□□□ 1.41
CAPN1-220ENST00000530567 TUBE1Q9UJT0 475 aa23.86■■□□□ 1.41
CAPN1-220ENST00000530567 STK24Q9Y6E0 443 aa23.86■■□□□ 1.41
CAPN1-220ENST00000530567 A0A087WWV3 80 aa23.85■■□□□ 1.41
CAPN1-220ENST00000530567 TRIM43BA6NCK2 446 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms