RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 HVCN1Q96D96 273 aa16.63■□□□□ 0.25
PCDHA4-203ENST00000530339 ATP6V1G3Q96LB4 118 aa16.63■□□□□ 0.25
PCDHA4-203ENST00000530339 MAGOHP61326 146 aaKnown RBP16.63■□□□□ 0.25
PCDHA4-203ENST00000530339 MECOMQ03112 1051 aa16.63■□□□□ 0.25
PCDHA4-203ENST00000530339 PPP2R5CQ13362 524 aa16.63■□□□□ 0.25
PCDHA4-203ENST00000530339 NFRKBQ6P4R8 1299 aa16.63■□□□□ 0.25
PCDHA4-203ENST00000530339 ZNF449Q6P9G9 518 aa16.63■□□□□ 0.25
PCDHA4-203ENST00000530339 CYB5R4Q7L1T6 521 aa16.63■□□□□ 0.25
PCDHA4-203ENST00000530339 KRT27Q7Z3Y8 459 aa16.63■□□□□ 0.25
PCDHA4-203ENST00000530339 RUBCNQ92622 972 aa16.63■□□□□ 0.25
PCDHA4-203ENST00000530339 PXDNLA1KZ92 1463 aa16.63■□□□□ 0.25
PCDHA4-203ENST00000530339 POLE2P56282 527 aa16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 RWDD2BP57060 319 aa16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 LLGL1Q15334 1064 aa16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 SNX24Q9Y343 169 aa16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 ACSL3O95573 720 aa16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 ESRRAP11474 423 aaPredicted RBP16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 OSBPP22059 807 aa16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 RSPH3Q86UC2 560 aa16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 PROCA1Q8NCQ7 364 aaPredicted RBP16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 MMS19Q96T76 1030 aa16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 ADGRB3O60242 1522 aa16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 SYNGAP1Q96PV0 1343 aa16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 ARHGEF37A1IGU5 675 aa16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 ZNF233A6NK53 670 aa16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 ATP5HO75947 161 aa16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 MTF1Q14872 753 aa16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 NBPF10Q6P3W6 841 aaKnown RBP16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 AFG3L2Q9Y4W6 797 aa16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 QRICH2Q9H0J4 1663 aa16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 LMNAP02545 664 aaKnown RBP16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 MXI1P50539 228 aa16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 COA7Q96BR5 231 aa16.62■□□□□ 0.25
PCDHA4-203ENST00000530339 CYP2D7A0A087X1C5 515 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 KCTD2Q14681 263 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 BEND6Q5SZJ8 279 aaPredicted RBP16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 SLFN12LQ6IEE8 588 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 TAF1DQ9H5J8 278 aaPredicted RBP16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 NEDD4P46934 1319 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 ATP1A1P05023 1023 aaKnown RBP16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 LY9Q9HBG7 655 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 UBN2Q6ZU65 1347 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 CDK8P49336 464 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 KPNA2P52292 529 aaKnown RBP16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 MUM1L1Q5H9M0 696 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 TMEM179Q6ZVK1 233 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 METTL16Q86W50 562 aaKnown RBP16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 OXER1Q8TDS5 423 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 SEPT9Q9UHD8 586 aaPredicted RBP16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 SCINQ9Y6U3 715 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 NRKQ7Z2Y5 1582 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 ESYT3A0FGR9 886 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 GFPT1Q06210 699 aaPredicted RBP16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 RFX6Q8HWS3 928 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 SAAL1Q96ER3 474 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 SCYL1Q96KG9 808 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 TSC22D3Q99576 134 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 MID2Q9UJV3 735 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 PALLDQ8WX93 1383 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 CDC27P30260 824 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 DDIT3P35638 169 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 USP17L2Q6R6M4 530 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 SPATA4Q8NEY3 305 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 HAUS8Q9BT25 410 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 LMTK2Q8IWU2 1503 aa16.61■□□□□ 0.25
PCDHA4-203ENST00000530339 MEIS1O00470 390 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 KRT1P04264 644 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 PSAPP07602 524 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 SPARCL1Q14515 664 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 CHD1O14646 1710 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 A0A1B0GTH6 734 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 KIF28PB7ZC32 967 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 MCF2LO15068 1137 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 TRIP13Q15645 432 aaPredicted RBP16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 MMEL1Q495T6 779 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 PRPF31Q8WWY3 499 aaKnown RBP16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 PIGBQ92521 554 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 ANO3Q9BYT9 981 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 IRX2Q9BZI1 471 aaPredicted RBP16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 TSPYL2Q9H2G4 693 aaPredicted RBP16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 KIAA1586Q9HCI6 787 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 IPO5O00410 1097 aaKnown RBP16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 FOXN1O15353 648 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 GPC4O75487 556 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 LDHAP00338 332 aaKnown RBP16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 PSD3Q9NYI0 1048 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 PPFIA2O75334 1257 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 JAK3P52333 1124 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 ANKRD20A4Q4UJ75 823 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 ANKRD20A8PQ5CZ79 823 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 ANKRD20A2Q5SQ80 823 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 ANKRD20A1Q5TYW2 823 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 SGMS1Q86VZ5 419 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 FGFR1OP2Q9NVK5 253 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 EPS15L1Q9UBC2 864 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 CAPN11Q9UMQ6 739 aa16.6■□□□□ 0.25
PCDHA4-203ENST00000530339 NPR1P16066 1061 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 FAM83BQ5T0W9 1011 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 PARP9Q8IXQ6 854 aa16.59■□□□□ 0.25
PCDHA4-203ENST00000530339 LRRC7Q96NW7 1537 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms