RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 FBXO47Q5MNV8 452 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 IER5Q5VY09 327 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 XRRA1Q6P2D8 792 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 RUFY4Q6ZNE9 571 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 RBM23Q86U06 439 aaKnown RBP10.36□□□□□ -0.75
VPS11-203ENST00000529545 NPAS4Q8IUM7 802 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 SMRP1Q8NCR6 262 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 SMARCC2Q8TAQ2 1214 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 SPPL3Q8TCT6 385 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 DNAJB3Q8WWF6 145 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 ATOH1Q92858 354 aaPredicted RBP10.36□□□□□ -0.75
VPS11-203ENST00000529545 GLG1Q92896 1179 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 TNPO1Q92973 898 aaKnown RBP10.36□□□□□ -0.75
VPS11-203ENST00000529545 CDHR1Q96JP9 859 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 PHF7Q9BWX1 381 aaPredicted RBP10.36□□□□□ -0.75
VPS11-203ENST00000529545 RIOX1Q9H6W3 641 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 TLE6Q9H808 572 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 ERAP1Q9NZ08 941 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 LRFN2Q9ULH4 789 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 USP15Q9Y4E8 981 aaPredicted RBP10.36□□□□□ -0.75
VPS11-203ENST00000529545 CDY2AQ9Y6F7 541 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 MRPL42Q9Y6G3 142 aaKnown RBP10.36□□□□□ -0.75
VPS11-203ENST00000529545 SQORQ9Y6N5 450 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 TTC3P53804 2025 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 ARHGAP33O14559 1287 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 ITGB1P05556 798 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 SRGAP2BP0DMP2 458 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 MARK3P27448 753 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 TCF7P36402 384 aaPredicted RBP10.35□□□□□ -0.75
VPS11-203ENST00000529545 MRPS6P82932 125 aaKnown RBP10.35□□□□□ -0.75
VPS11-203ENST00000529545 MGAT3Q09327 533 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 TCF15Q12870 199 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 CAMK1Q14012 370 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 CBX2Q14781 532 aaPredicted RBP10.35□□□□□ -0.75
VPS11-203ENST00000529545 GRM4Q14833 912 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 GRIK4Q16099 956 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 PAN2Q504Q3 1202 aaKnown RBP10.35□□□□□ -0.75
VPS11-203ENST00000529545 SPOUT1Q5T280 376 aaKnown RBP10.35□□□□□ -0.75
VPS11-203ENST00000529545 PCNX4Q63HM2 1172 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 ADGRD2Q7Z7M1 963 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 ZBTB33Q86T24 672 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 KLHL23Q8NBE8 558 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 POF1BQ8WVV4 589 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 SEPT1Q8WYJ6 367 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 RPGRIP1Q96KN7 1286 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 LNPKQ9C0E8 428 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 SMARCAD1Q9H4L7 1026 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 AAASQ9NRG9 546 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 CLEC1BQ9P126 229 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 SUPT16HQ9Y5B9 1047 aaKnown RBP10.35□□□□□ -0.75
VPS11-203ENST00000529545 PCDHB12Q9Y5F1 795 aa10.35□□□□□ -0.75
VPS11-203ENST00000529545 FRMPD4Q14CM0 1322 aa10.34□□□□□ -0.75
VPS11-203ENST00000529545 RRN3P2A6NIE6 340 aa10.34□□□□□ -0.75
VPS11-203ENST00000529545 PPFIA3O75145 1194 aa10.34□□□□□ -0.75
VPS11-203ENST00000529545 ATF7P17544 494 aaPredicted RBP10.34□□□□□ -0.75
VPS11-203ENST00000529545 AVPR2P30518 371 aa10.34□□□□□ -0.75
VPS11-203ENST00000529545 CD52P31358 61 aa10.34□□□□□ -0.75
VPS11-203ENST00000529545 IGBP1P78318 339 aa10.34□□□□□ -0.75
VPS11-203ENST00000529545 FOXK2Q01167 660 aa10.34□□□□□ -0.75
VPS11-203ENST00000529545 PAK2Q13177 524 aa10.34□□□□□ -0.75
VPS11-203ENST00000529545 SEMA3FQ13275 785 aa10.34□□□□□ -0.75
VPS11-203ENST00000529545 HDAC1Q13547 482 aaPredicted RBP10.34□□□□□ -0.75
VPS11-203ENST00000529545 SART3Q15020 963 aaKnown RBP10.34□□□□□ -0.75
VPS11-203ENST00000529545 SEC23AQ15436 765 aa10.34□□□□□ -0.75
VPS11-203ENST00000529545 GPRASP2Q96D09 838 aa10.34□□□□□ -0.75
VPS11-203ENST00000529545 NEK1Q96PY6 1258 aa10.34□□□□□ -0.75
VPS11-203ENST00000529545 FAM49AQ9H0Q0 323 aaPredicted RBP10.34□□□□□ -0.75
VPS11-203ENST00000529545 BARX2Q9UMQ3 279 aaPredicted RBP10.34□□□□□ -0.75
VPS11-203ENST00000529545 WDFY4Q6ZS81 3184 aa10.34□□□□□ -0.75
VPS11-203ENST00000529545 KIAA1671Q9BY89 1806 aa10.33□□□□□ -0.76
VPS11-203ENST00000529545 MBLAC1A4D2B0 266 aaPredicted RBP10.33□□□□□ -0.76
VPS11-203ENST00000529545 IFIT3O14879 490 aaKnown RBP10.33□□□□□ -0.76
VPS11-203ENST00000529545 SCG2P13521 617 aa10.33□□□□□ -0.76
VPS11-203ENST00000529545 IBSPP21815 317 aaPredicted RBP10.33□□□□□ -0.76
VPS11-203ENST00000529545 DNAJB1P25685 340 aa10.33□□□□□ -0.76
VPS11-203ENST00000529545 UBE3AQ05086 875 aa10.33□□□□□ -0.76
VPS11-203ENST00000529545 FAM43BQ6ZT52 329 aaPredicted RBP10.33□□□□□ -0.76
VPS11-203ENST00000529545 CATIPQ7Z7H3 387 aa10.33□□□□□ -0.76
VPS11-203ENST00000529545 PIBF1Q8WXW3 757 aa10.33□□□□□ -0.76
VPS11-203ENST00000529545 CDCA3Q99618 268 aaPredicted RBP10.33□□□□□ -0.76
VPS11-203ENST00000529545 AZI2Q9H6S1 392 aa10.33□□□□□ -0.76
VPS11-203ENST00000529545 AGO3Q9H9G7 860 aaKnown RBP10.33□□□□□ -0.76
VPS11-203ENST00000529545 FAM86C1Q9NVL1 165 aa10.33□□□□□ -0.76
VPS11-203ENST00000529545 SEC63Q9UGP8 760 aaKnown RBP10.33□□□□□ -0.76
VPS11-203ENST00000529545 PADI3Q9ULW8 664 aa10.33□□□□□ -0.76
VPS11-203ENST00000529545 PCDHB7Q9Y5E2 793 aa10.33□□□□□ -0.76
VPS11-203ENST00000529545 TRPV2Q9Y5S1 764 aa10.33□□□□□ -0.76
VPS11-203ENST00000529545 KMT2EQ8IZD2 1858 aa10.33□□□□□ -0.76
VPS11-203ENST00000529545 BAZ2BQ9UIF8 2168 aaKnown RBP10.33□□□□□ -0.76
VPS11-203ENST00000529545 TRIOO75962 3097 aa10.33□□□□□ -0.76
VPS11-203ENST00000529545 C5orf42Q9H799 3197 aa10.32□□□□□ -0.76
VPS11-203ENST00000529545 PER2O15055 1255 aa10.32□□□□□ -0.76
VPS11-203ENST00000529545 CYTH3O43739 400 aa10.32□□□□□ -0.76
VPS11-203ENST00000529545 INSRRP14616 1297 aa10.32□□□□□ -0.76
VPS11-203ENST00000529545 VCPP55072 806 aaKnown RBP10.32□□□□□ -0.76
VPS11-203ENST00000529545 CAMK2BQ13554 666 aa10.32□□□□□ -0.76
VPS11-203ENST00000529545 WTAPQ15007 396 aa10.32□□□□□ -0.76
VPS11-203ENST00000529545 PTPN21Q16825 1174 aa10.32□□□□□ -0.76
VPS11-203ENST00000529545 PDE12Q6L8Q7 609 aaKnown RBP10.32□□□□□ -0.76
VPS11-203ENST00000529545 B4GALNT3Q6L9W6 998 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms