RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 MRPL12P52815 198 aaKnown RBP17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 SPATA4Q8NEY3 305 aa17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 KLRG1Q96E93 195 aa17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 LRRC1Q9BTT6 524 aa17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 EDEM3Q9BZQ6 932 aa17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 PSTPIP2Q9H939 334 aa17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 NLRC4Q9NPP4 1024 aa17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 EHD2Q9NZN4 543 aa17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 NPHP3-ACAD11A0A0J9YXS1 232 aa17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 AGPSO00116 658 aa17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 MARCH6O60337 910 aa17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 IRX5P78411 483 aaPredicted RBP17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 ITIH3Q06033 890 aa17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 AENQ8WTP8 325 aaKnown RBP17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 ALS2CR12Q96Q35 445 aa17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 WDR18Q9BV38 432 aa17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 GLIS2Q9BZE0 524 aaPredicted RBP17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 DMGDHQ9UI17 866 aaKnown RBP17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 FEM1BQ9UK73 627 aa17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 HYOU1Q9Y4L1 999 aa17.36■□□□□ 0.37
TM9SF1-208ENST00000529332 SSU72P8A0A1W2PR75 194 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 WDR46O15213 610 aaKnown RBP17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 GCFC2P16383 781 aaKnown RBP17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 NF2P35240 595 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 GGCXP38435 758 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 MRPS25P82663 173 aaKnown RBP17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 APBA1Q02410 837 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 CACNB1Q02641 598 aaPredicted RBP17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 CCDC40Q4G0X9 1142 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 KIAA1755Q5JYT7 1200 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 NOL9Q5SY16 702 aaKnown RBP17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 PNMA8AQ86V59 439 aaPredicted RBP17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 NELFCDQ8IXH7 590 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 AMNQ9BXJ7 453 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 TLR10Q9BXR5 811 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 PRR12Q9ULL5 1215 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 KIAA1024Q9UPX6 916 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 USP17L15C9J2P7 530 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 USP17L13C9JLJ4 530 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 ADM5C9JUS6 153 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 USP17L11C9JVI0 530 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 USP17L18D6R9N7 530 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 USP17L22D6RA61 530 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 USP17L17D6RBQ6 530 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 USP17L19D6RCP7 530 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 USP17L20D6RJB6 530 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 RBAK-RBAKDNI3L0D1 243 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 PPP1R12BO60237 982 aaPredicted RBP17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 TCP1P17987 556 aaKnown RBP17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 USP17L24Q0WX57 530 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 USP17L6PQ6QN14 398 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 LEKR1Q6ZMV7 388 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 FBXO11Q86XK2 927 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 ZKSCAN4Q969J2 545 aaPredicted RBP17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 CEP72Q9P209 647 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 PCDHA1Q9Y5I3 950 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 UTRNP46939 3433 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 PHIPQ8WWQ0 1821 aa17.35■□□□□ 0.37
TM9SF1-208ENST00000529332 POTEB3A0JP26 581 aa17.34■□□□□ 0.37
TM9SF1-208ENST00000529332 POTECB2RU33 542 aa17.34■□□□□ 0.37
TM9SF1-208ENST00000529332 BUB1O43683 1085 aa17.34■□□□□ 0.37
TM9SF1-208ENST00000529332 RPS6KA5O75582 802 aa17.34■□□□□ 0.37
TM9SF1-208ENST00000529332 PLA2G4BP0C869 781 aa17.34■□□□□ 0.37
TM9SF1-208ENST00000529332 TDRD12Q587J7 1177 aaKnown RBP17.34■□□□□ 0.37
TM9SF1-208ENST00000529332 KLHDC7AQ5VTJ3 777 aa17.34■□□□□ 0.37
TM9SF1-208ENST00000529332 POTEBQ6S5H4 581 aa17.34■□□□□ 0.37
TM9SF1-208ENST00000529332 CEP63Q96MT8 703 aa17.34■□□□□ 0.37
TM9SF1-208ENST00000529332 CRACR2AQ9BSW2 395 aa17.34■□□□□ 0.37
TM9SF1-208ENST00000529332 LSM14BQ9BX40 385 aaKnown RBP17.34■□□□□ 0.37
TM9SF1-208ENST00000529332 NT5C3AQ9H0P0 336 aa17.34■□□□□ 0.37
TM9SF1-208ENST00000529332 TAF1DQ9H5J8 278 aaPredicted RBP17.34■□□□□ 0.37
TM9SF1-208ENST00000529332 FAM184BQ9ULE4 1060 aa17.34■□□□□ 0.37
TM9SF1-208ENST00000529332 KDM3AQ9Y4C1 1321 aa17.34■□□□□ 0.37
TM9SF1-208ENST00000529332 PAPPA2Q9BXP8 1791 aa17.33■□□□□ 0.37
TM9SF1-208ENST00000529332 PTPRAP18433 802 aa17.33■□□□□ 0.37
TM9SF1-208ENST00000529332 MATR3P43243 847 aaKnown RBP eCLIP17.33■□□□□ 0.37
TM9SF1-208ENST00000529332 SLC7A5Q01650 507 aa17.33■□□□□ 0.37
TM9SF1-208ENST00000529332 FOXR1Q6PIV2 292 aa17.33■□□□□ 0.37
TM9SF1-208ENST00000529332 TRIM59Q8IWR1 403 aa17.33■□□□□ 0.37
TM9SF1-208ENST00000529332 ZNF280CQ8ND82 737 aa17.33■□□□□ 0.37
TM9SF1-208ENST00000529332 SCFD1Q8WVM8 642 aa17.33■□□□□ 0.37
TM9SF1-208ENST00000529332 KCTD10Q9H3F6 313 aa17.33■□□□□ 0.37
TM9SF1-208ENST00000529332 OTOFQ9HC10 1997 aa17.33■□□□□ 0.36
TM9SF1-208ENST00000529332 SRCAPQ6ZRS2 3230 aa17.33■□□□□ 0.36
TM9SF1-208ENST00000529332 CYP11B2P19099 503 aa17.33■□□□□ 0.36
TM9SF1-208ENST00000529332 STAT3P40763 770 aa17.33■□□□□ 0.36
TM9SF1-208ENST00000529332 POLR2FP61218 127 aaKnown RBP17.33■□□□□ 0.36
TM9SF1-208ENST00000529332 MTMR2Q13614 643 aa17.33■□□□□ 0.36
TM9SF1-208ENST00000529332 EAPPQ56P03 285 aaPredicted RBP17.33■□□□□ 0.36
TM9SF1-208ENST00000529332 SFMBT2Q5VUG0 894 aa17.33■□□□□ 0.36
TM9SF1-208ENST00000529332 CCDC70Q6NSX1 233 aa17.33■□□□□ 0.36
TM9SF1-208ENST00000529332 GPBP1Q86WP2 473 aa17.33■□□□□ 0.36
TM9SF1-208ENST00000529332 CCDC65Q8IXS2 484 aa17.33■□□□□ 0.36
TM9SF1-208ENST00000529332 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.33■□□□□ 0.36
TM9SF1-208ENST00000529332 AFAP1L1Q8TED9 768 aa17.33■□□□□ 0.36
TM9SF1-208ENST00000529332 SYN2Q92777 582 aaPredicted RBP17.33■□□□□ 0.36
TM9SF1-208ENST00000529332 NOX5Q96PH1 765 aa17.33■□□□□ 0.36
TM9SF1-208ENST00000529332 KCNMB3Q9NPA1 279 aa17.33■□□□□ 0.36
TM9SF1-208ENST00000529332 BMP2KQ9NSY1 1161 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms