RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 TGIF2Q9GZN2 237 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 AP5M1Q9H0R1 490 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 EHMT1Q9H9B1 1298 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 CAPN10Q9HC96 672 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 JADE2Q9NQC1 790 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 KCNJ14Q9UNX9 436 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 UBIAD1Q9Y5Z9 338 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 SYNRGQ9UMZ2 1314 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 MYADML2A6NDP7 307 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 KBTBD13C9JR72 458 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 MEIS1O00470 390 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 FIBPO43427 364 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 EDIL3O43854 480 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 PPFIA4O75335 1185 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 PEX14O75381 377 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 GH1P01241 217 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 ASGR1P07306 291 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 USP11P51784 963 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 ACLYP53396 1101 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 USP46P62068 366 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 HMGN5P82970 282 aaKnown RBP7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 ARHGAP4P98171 946 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 MLLT1Q03111 559 aaPredicted RBP7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 NR1H3Q13133 447 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 LAMC2Q13753 1193 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 FSCN1Q16658 493 aaKnown RBP7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 GNPTABQ3T906 1256 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 CEP55Q53EZ4 464 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 GET4Q7L5D6 327 aaPredicted RBP7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 RNF135Q8IUD6 432 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 RGL4Q8IZJ4 473 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 PCSK9Q8NBP7 692 aaKnown RBP7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 CYP2W1Q8TAV3 490 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 CXorf38Q8TB03 319 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 RASGRP4Q8TDF6 673 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 VTI1AQ96AJ9 217 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 GPRASP2Q96D09 838 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 SENP7Q9BQF6 1050 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 MXRA8Q9BRK3 442 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 SENP6Q9GZR1 1112 aaPredicted RBP7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 PIF1Q9H611 641 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 C11orf49Q9H6J7 331 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 ZSWIM4Q9H7M6 989 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 PHF24Q9UPV7 400 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 MRVI1Q9Y6F6 885 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 MCM3APO60318 1980 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 RBBP6Q7Z6E9 1792 aaKnown RBP7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 HOXA2O43364 376 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 ZEB2O60315 1214 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 ATP9AO75110 1047 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 CIITAP33076 1130 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 ZNF76P36508 570 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 CPT1AP50416 773 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 BEX3Q00994 111 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 SATB1Q01826 763 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 ARHGAP1Q07960 439 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 CUL4AQ13619 759 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 GNL2Q13823 731 aaKnown RBP7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 NEDD9Q14511 834 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 NR6A1Q15406 480 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 BRDTQ58F21 947 aaPredicted RBP7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 CELF3Q5SZQ8 465 aaKnown RBP7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 KRT40Q6A162 431 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 SLC39A5Q6ZMH5 540 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 CREBRFQ8IUR6 639 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 FAM184AQ8NB25 1140 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 TMEM87AQ8NBN3 555 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 OR6J1Q8NGC5 347 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 TBCKQ8TEA7 893 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 SNX21Q969T3 373 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 EMID1Q96A84 441 aaPredicted RBP7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 FERMT2Q96AC1 680 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 CDHR1Q96JP9 859 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 BCAS3Q9H6U6 928 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 KCNH7Q9NS40 1196 aa7.1□□□□□ -1.27
ATPAF1-209ENST00000529214 IGLV3-22A0A075B6J6 115 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 CYP3A7-CYP3A51PA0A087WV96 503 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 A0A1W2PQ45 241 aaPredicted RBP7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 A0A1W2PQY0 241 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 BTBD18B2RXH4 712 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 FAM86B1E9PN63 330 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 KPNA6O60684 536 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 CABYRO75952 493 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 ZRANB2O95218 330 aaKnown RBP eCLIP7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 KIF4AO95239 1232 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 GGPS1O95749 300 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 MMP1P03956 469 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 FAM86B2P0C5J1 330 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 ARP10275 920 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 KCNA2P16389 499 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 LIG1P18858 919 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 UBA1P22314 1058 aaKnown RBP7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 CYP3A7P24462 503 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 KRT2P35908 639 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 MTMR1Q13613 665 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 TRIM29Q14134 588 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 HSDL1Q3SXM5 330 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 ZFYVE27Q5T4F4 411 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 C1orf53Q5VUE5 145 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 CYFIP1Q7L576 1253 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms