RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 HAUS3Q68CZ6 603 aa13.05□□□□□ -0.32
USF1-208ENST00000528768 BTNL9Q6UXG8 535 aa13.05□□□□□ -0.32
USF1-208ENST00000528768 CHURC1Q8WUH1 139 aa13.05□□□□□ -0.32
USF1-208ENST00000528768 RAD54LQ92698 747 aa13.05□□□□□ -0.32
USF1-208ENST00000528768 ANO3Q9BYT9 981 aa13.05□□□□□ -0.32
USF1-208ENST00000528768 PPP2R2CQ9Y2T4 447 aa13.05□□□□□ -0.32
USF1-208ENST00000528768 SYNGAP1Q96PV0 1343 aa13.05□□□□□ -0.32
USF1-208ENST00000528768 RLFQ13129 1914 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 MYH4Q9Y623 1939 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 PPP1R11O60927 126 aaPredicted RBP13.04□□□□□ -0.32
USF1-208ENST00000528768 GDF11O95390 407 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 NDUFB10O96000 172 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 CYBAP13498 195 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 CCT6AP40227 531 aaKnown RBP13.04□□□□□ -0.32
USF1-208ENST00000528768 ADKP55263 362 aaKnown RBP13.04□□□□□ -0.32
USF1-208ENST00000528768 UBXN1Q04323 297 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 RBL2Q08999 1139 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 GRB10Q13322 594 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 GRB14Q14449 540 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 TRIM60Q495X7 471 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 TMEM119Q4V9L6 283 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 GJC2Q5T442 439 aaPredicted RBP13.04□□□□□ -0.32
USF1-208ENST00000528768 OLFML2BQ68BL8 750 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 FOXR2Q6PJQ5 311 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 APTXQ7Z2E3 356 aaKnown RBP13.04□□□□□ -0.32
USF1-208ENST00000528768 FAM160B2Q86V87 743 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 CSGALNACT2Q8N6G5 542 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 RETREG2Q8NC44 543 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 ADAMTS19Q8TE59 1207 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 UHRF1Q96T88 793 aaPredicted RBP13.04□□□□□ -0.32
USF1-208ENST00000528768 NUP88Q99567 741 aaPredicted RBP13.04□□□□□ -0.32
USF1-208ENST00000528768 MMTAG2Q9BU76 263 aaKnown RBP13.04□□□□□ -0.32
USF1-208ENST00000528768 VPS16Q9H269 839 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 ZNF576Q9H609 170 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 TAB2Q9NYJ8 693 aa13.04□□□□□ -0.32
USF1-208ENST00000528768 LGALS16A8MUM7 142 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 USP17L15C9J2P7 530 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 USP17L13C9JLJ4 530 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 USP17L11C9JVI0 530 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 USP17L18D6R9N7 530 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 USP17L22D6RA61 530 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 USP17L17D6RBQ6 530 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 USP17L19D6RCP7 530 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 USP17L20D6RJB6 530 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 PES1O00541 588 aaKnown RBP13.03□□□□□ -0.32
USF1-208ENST00000528768 SEPT4O43236 478 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 TEX33O43247 280 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 STRNO43815 780 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 SLC37A4O43826 429 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 CASQ1P31415 396 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 MTIF2P46199 727 aaKnown RBP13.03□□□□□ -0.32
USF1-208ENST00000528768 USP14P54578 494 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 RBM10P98175 930 aaKnown RBP13.03□□□□□ -0.32
USF1-208ENST00000528768 LRRC63Q05C16 580 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 USP17L24Q0WX57 530 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 HYIQ5T013 277 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 WDR78Q5VTH9 848 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 CCDC174Q6PII3 467 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 CYP26C1Q6V0L0 522 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 LBX2Q6XYB7 198 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 SYT10Q6XYQ8 523 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 CCDC65Q8IXS2 484 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 GUF1Q8N442 669 aaKnown RBP13.03□□□□□ -0.32
USF1-208ENST00000528768 MB21D1Q8N884 522 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 USP38Q8NB14 1042 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 C12orf42Q96LP6 360 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 FAM20AQ96MK3 541 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 PNMA5Q96PV4 448 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 TSPYL2Q9H2G4 693 aaPredicted RBP13.03□□□□□ -0.32
USF1-208ENST00000528768 ZNHIT6Q9NWK9 470 aaKnown RBP13.03□□□□□ -0.32
USF1-208ENST00000528768 SLC5A4Q9NY91 659 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 FLRT1Q9NZU1 646 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 MAPK8IP1Q9UQF2 711 aa13.03□□□□□ -0.32
USF1-208ENST00000528768 TRIM43BA6NCK2 446 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 KIAA0355O15063 1070 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 IGHA2P01877 340 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 CLTBP09497 229 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 RAG1P15918 1043 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 ZNF76P36508 570 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 STAT2P52630 851 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 FPGSQ05932 587 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 TUBB2AQ13885 445 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 MCM6Q14566 821 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 RRP1BQ14684 758 aaKnown RBP13.02□□□□□ -0.33
USF1-208ENST00000528768 Q4G0T1 1027 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 TTI2Q6NXR4 508 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 TMEM139Q8IV31 216 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 PDCL2Q8N4E4 241 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 ZNF397Q8NF99 534 aaPredicted RBP13.02□□□□□ -0.33
USF1-208ENST00000528768 CPLX3Q8WVH0 158 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 TRIM43Q96BQ3 446 aaPredicted RBP13.02□□□□□ -0.33
USF1-208ENST00000528768 TIFAQ96CG3 184 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 MBOAT7Q96N66 472 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 TUBB2BQ9BVA1 445 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 CGNQ9P2M7 1197 aaKnown RBP13.02□□□□□ -0.33
USF1-208ENST00000528768 RAPGEFL1Q9UHV5 662 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 DNAI1Q9UI46 699 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 TMX2Q9Y320 296 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 HCN4Q9Y3Q4 1203 aa13.02□□□□□ -0.33
USF1-208ENST00000528768 ABCB11O95342 1321 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms