RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 TOB2Q14106 344 aaPredicted RBP17.24■□□□□ 0.35
EXOSC4-203ENST00000527954 EPC2Q52LR7 807 aa17.24■□□□□ 0.35
EXOSC4-203ENST00000527954 IER5Q5VY09 327 aa17.24■□□□□ 0.35
EXOSC4-203ENST00000527954 FAM160B1Q5W0V3 765 aa17.24■□□□□ 0.35
EXOSC4-203ENST00000527954 MTHFD1LQ6UB35 978 aa17.24■□□□□ 0.35
EXOSC4-203ENST00000527954 TSHZ1Q6ZSZ6 1077 aa17.24■□□□□ 0.35
EXOSC4-203ENST00000527954 CCDC60Q8IWA6 550 aaPredicted RBP17.24■□□□□ 0.35
EXOSC4-203ENST00000527954 LARP6Q9BRS8 491 aaKnown RBP17.24■□□□□ 0.35
EXOSC4-203ENST00000527954 AGO3Q9H9G7 860 aaKnown RBP17.24■□□□□ 0.35
EXOSC4-203ENST00000527954 ZNF302Q9NR11 478 aa17.24■□□□□ 0.35
EXOSC4-203ENST00000527954 VPS54Q9P1Q0 977 aa17.24■□□□□ 0.35
EXOSC4-203ENST00000527954 TRPV2Q9Y5S1 764 aa17.24■□□□□ 0.35
EXOSC4-203ENST00000527954 PRRC2BQ5JSZ5 2229 aaKnown RBP17.24■□□□□ 0.35
EXOSC4-203ENST00000527954 SMIM35A0A1B0GVV1 85 aa17.23■□□□□ 0.35
EXOSC4-203ENST00000527954 RPLP2P05387 115 aaKnown RBP17.23■□□□□ 0.35
EXOSC4-203ENST00000527954 SWSAP1Q6NVH7 229 aa17.23■□□□□ 0.35
EXOSC4-203ENST00000527954 MIS18BP1Q6P0N0 1132 aa17.23■□□□□ 0.35
EXOSC4-203ENST00000527954 PDXDC2PQ6P474 469 aa17.23■□□□□ 0.35
EXOSC4-203ENST00000527954 CCDC148Q8NFR7 591 aa17.23■□□□□ 0.35
EXOSC4-203ENST00000527954 BICD2Q8TD16 824 aa17.23■□□□□ 0.35
EXOSC4-203ENST00000527954 IL17RAQ96F46 866 aa17.23■□□□□ 0.35
EXOSC4-203ENST00000527954 SAMD11Q96NU1 681 aa17.23■□□□□ 0.35
EXOSC4-203ENST00000527954 NECAB3Q96P71 396 aaPredicted RBP17.23■□□□□ 0.35
EXOSC4-203ENST00000527954 TBC1D22BQ9NU19 505 aa17.23■□□□□ 0.35
EXOSC4-203ENST00000527954 CYP46A1Q9Y6A2 500 aa17.23■□□□□ 0.35
EXOSC4-203ENST00000527954 M0QZ92 97 aa17.22■□□□□ 0.35
EXOSC4-203ENST00000527954 EPB41L2O43491 1005 aaKnown RBP17.22■□□□□ 0.35
EXOSC4-203ENST00000527954 HBP1O60381 514 aa17.22■□□□□ 0.35
EXOSC4-203ENST00000527954 NEFLP07196 543 aa17.22■□□□□ 0.35
EXOSC4-203ENST00000527954 KLRC1P26715 233 aa17.22■□□□□ 0.35
EXOSC4-203ENST00000527954 GPM6BQ13491 265 aa17.22■□□□□ 0.35
EXOSC4-203ENST00000527954 PRR16Q569H4 304 aa17.22■□□□□ 0.35
EXOSC4-203ENST00000527954 TMEM192Q8IY95 271 aa17.22■□□□□ 0.35
EXOSC4-203ENST00000527954 FIBCD1Q8N539 461 aa17.22■□□□□ 0.35
EXOSC4-203ENST00000527954 ATP8B4Q8TF62 1192 aa17.22■□□□□ 0.35
EXOSC4-203ENST00000527954 LINC01599Q8WXQ3 324 aa17.22■□□□□ 0.35
EXOSC4-203ENST00000527954 CELF4Q9BZC1 486 aaKnown RBP17.22■□□□□ 0.35
EXOSC4-203ENST00000527954 UPF3BQ9BZI7 483 aaKnown RBP17.22■□□□□ 0.35
EXOSC4-203ENST00000527954 TRANK1O15050 2925 aa17.22■□□□□ 0.35
EXOSC4-203ENST00000527954 SIP14410 1827 aa17.21■□□□□ 0.35
EXOSC4-203ENST00000527954 H3BNC9 293 aa17.21■□□□□ 0.35
EXOSC4-203ENST00000527954 ATP4AP20648 1035 aa17.21■□□□□ 0.35
EXOSC4-203ENST00000527954 NLRP5P59047 1200 aa17.21■□□□□ 0.35
EXOSC4-203ENST00000527954 SETQ01105 290 aaPredicted RBP17.21■□□□□ 0.35
EXOSC4-203ENST00000527954 ZNF484Q5JVG2 852 aa17.21■□□□□ 0.35
EXOSC4-203ENST00000527954 TRMT1LQ7Z2T5 733 aaKnown RBP17.21■□□□□ 0.35
EXOSC4-203ENST00000527954 RTN4RL1Q86UN2 441 aaPredicted RBP17.21■□□□□ 0.35
EXOSC4-203ENST00000527954 CKAP2LQ8IYA6 745 aa17.21■□□□□ 0.35
EXOSC4-203ENST00000527954 NME8Q8N427 588 aa17.21■□□□□ 0.35
EXOSC4-203ENST00000527954 PADI3Q9ULW8 664 aa17.21■□□□□ 0.35
EXOSC4-203ENST00000527954 SQORQ9Y6N5 450 aa17.21■□□□□ 0.35
EXOSC4-203ENST00000527954 KAT6AQ92794 2004 aa17.21■□□□□ 0.35
EXOSC4-203ENST00000527954 XIRP2A4UGR9 3374 aa17.2■□□□□ 0.34
EXOSC4-203ENST00000527954 EDIL3O43854 480 aa17.2■□□□□ 0.34
EXOSC4-203ENST00000527954 CIITAP33076 1130 aa17.2■□□□□ 0.34
EXOSC4-203ENST00000527954 KRT76Q01546 638 aa17.2■□□□□ 0.34
EXOSC4-203ENST00000527954 SSRP1Q08945 709 aaKnown RBP17.2■□□□□ 0.34
EXOSC4-203ENST00000527954 STK3Q13188 491 aa17.2■□□□□ 0.34
EXOSC4-203ENST00000527954 ZNF746Q6NUN9 644 aaPredicted RBP17.2■□□□□ 0.34
EXOSC4-203ENST00000527954 TRIM22Q8IYM9 498 aa17.2■□□□□ 0.34
EXOSC4-203ENST00000527954 LENG9Q96B70 501 aa17.2■□□□□ 0.34
EXOSC4-203ENST00000527954 MRPL38Q96DV4 380 aaKnown RBP17.2■□□□□ 0.34
EXOSC4-203ENST00000527954 ZNF274Q96GC6 653 aaPredicted RBP17.2■□□□□ 0.34
EXOSC4-203ENST00000527954 TM6SF1Q9BZW5 370 aa17.2■□□□□ 0.34
EXOSC4-203ENST00000527954 SH3GLB2Q9NR46 395 aa17.2■□□□□ 0.34
EXOSC4-203ENST00000527954 TCEAL9Q9UHQ7 104 aa17.2■□□□□ 0.34
EXOSC4-203ENST00000527954 GINS2Q9Y248 185 aa17.2■□□□□ 0.34
EXOSC4-203ENST00000527954 IGSF9BQ9UPX0 1349 aa17.2■□□□□ 0.34
EXOSC4-203ENST00000527954 COL1A2P08123 1366 aa17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 ZBTB42B2RXF5 422 aa17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 PSAPP07602 524 aa17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 CTNNB1P35222 781 aa17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 PAK2Q13177 524 aa17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 PTPROQ16827 1216 aa17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 TMEM266Q2M3C6 531 aa17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 SMAP1Q8IYB5 467 aaPredicted RBP17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 KIAA0319LQ8IZA0 1049 aa17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 FTHL17Q9BXU8 183 aa17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 CDHR5Q9HBB8 845 aa17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 RC3H2Q9HBD1 1191 aaKnown RBP17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 PDRG1Q9NUG6 133 aa17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 GABBR1Q9UBS5 961 aa17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 SAMM50Q9Y512 469 aa17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 PCDHA10Q9Y5I2 948 aa17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 MAFBQ9Y5Q3 323 aaPredicted RBP17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 COL4A6Q14031 1691 aa17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 ADGRA3Q8IWK6 1321 aa17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 KDM3AQ9Y4C1 1321 aa17.19■□□□□ 0.34
EXOSC4-203ENST00000527954 REV3LO60673 3130 aa17.18■□□□□ 0.34
EXOSC4-203ENST00000527954 CPLX1O14810 134 aa17.18■□□□□ 0.34
EXOSC4-203ENST00000527954 MSH4O15457 936 aa17.18■□□□□ 0.34
EXOSC4-203ENST00000527954 DGKIO75912 1065 aa17.18■□□□□ 0.34
EXOSC4-203ENST00000527954 BMPR1AP36894 532 aa17.18■□□□□ 0.34
EXOSC4-203ENST00000527954 BTG3Q14201 252 aaPredicted RBP17.18■□□□□ 0.34
EXOSC4-203ENST00000527954 TBCKQ8TEA7 893 aa17.18■□□□□ 0.34
EXOSC4-203ENST00000527954 BBXQ8WY36 941 aaPredicted RBP17.18■□□□□ 0.34
EXOSC4-203ENST00000527954 ZNF689Q96CS4 500 aaPredicted RBP17.18■□□□□ 0.34
EXOSC4-203ENST00000527954 UBE2ZQ9H832 354 aaPredicted RBP17.18■□□□□ 0.34
EXOSC4-203ENST00000527954 PCDHA4Q9UN74 947 aa17.18■□□□□ 0.34
EXOSC4-203ENST00000527954 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms