RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-212ENST00000527805 GCNT4Q9P109 453 aa16.19■□□□□ 0.18
ATM-212ENST00000527805 SEL1LQ9UBV2 794 aa16.19■□□□□ 0.18
ATM-212ENST00000527805 CLDN3O15551 220 aa16.19■□□□□ 0.18
ATM-212ENST00000527805 C7orf31Q8N865 590 aa16.19■□□□□ 0.18
ATM-212ENST00000527805 IPO4Q8TEX9 1081 aaKnown RBP16.19■□□□□ 0.18
ATM-212ENST00000527805 LRRN2O75325 713 aa16.18■□□□□ 0.18
ATM-212ENST00000527805 RBL2Q08999 1139 aa16.18■□□□□ 0.18
ATM-212ENST00000527805 SREBF2Q12772 1141 aa16.18■□□□□ 0.18
ATM-212ENST00000527805 EPN1Q9Y6I3 576 aaPredicted RBP16.18■□□□□ 0.18
ATM-212ENST00000527805 NFIBO00712 420 aa16.18■□□□□ 0.18
ATM-212ENST00000527805 MAFGO15525 162 aa16.18■□□□□ 0.18
ATM-212ENST00000527805 NR3C1P04150 777 aa16.18■□□□□ 0.18
ATM-212ENST00000527805 PTK2Q05397 1052 aa16.18■□□□□ 0.18
ATM-212ENST00000527805 XKR3Q5GH77 459 aa16.18■□□□□ 0.18
ATM-212ENST00000527805 OR6J1Q8NGC5 347 aa16.18■□□□□ 0.18
ATM-212ENST00000527805 POLR3FQ9H1D9 316 aaPredicted RBP16.18■□□□□ 0.18
ATM-212ENST00000527805 FAM217BQ9NTX9 383 aaPredicted RBP16.18■□□□□ 0.18
ATM-212ENST00000527805 CGNQ9P2M7 1197 aaKnown RBP16.18■□□□□ 0.18
ATM-212ENST00000527805 HESX1Q9UBX0 185 aa16.18■□□□□ 0.18
ATM-212ENST00000527805 PHKA2P46019 1235 aa16.18■□□□□ 0.18
ATM-212ENST00000527805 KNOP1Q1ED39 458 aaKnown RBP16.18■□□□□ 0.18
ATM-212ENST00000527805 XRRA1Q6P2D8 792 aa16.18■□□□□ 0.18
ATM-212ENST00000527805 CACTINQ8WUQ7 758 aaKnown RBP16.18■□□□□ 0.18
ATM-212ENST00000527805 CCDC94Q9BW85 323 aaPredicted RBP16.18■□□□□ 0.18
ATM-212ENST00000527805 MAK16Q9BXY0 300 aaKnown RBP16.18■□□□□ 0.18
ATM-212ENST00000527805 CACNA1FO60840 1977 aa16.18■□□□□ 0.18
ATM-212ENST00000527805 SLC37A4O43826 429 aa16.17■□□□□ 0.18
ATM-212ENST00000527805 HIP1RO75146 1068 aa16.17■□□□□ 0.18
ATM-212ENST00000527805 GUF1Q8N442 669 aaKnown RBP16.17■□□□□ 0.18
ATM-212ENST00000527805 XXYLT1Q8NBI6 393 aa16.17■□□□□ 0.18
ATM-212ENST00000527805 SCFD2Q8WU76 684 aa16.17■□□□□ 0.18
ATM-212ENST00000527805 UPF1Q92900 1129 aaKnown RBP eCLIP16.17■□□□□ 0.18
ATM-212ENST00000527805 NXF1Q9UBU9 619 aaKnown RBP16.17■□□□□ 0.18
ATM-212ENST00000527805 AGTPBP1Q9UPW5 1226 aa16.17■□□□□ 0.18
ATM-212ENST00000527805 CXCL11O14625 94 aa16.17■□□□□ 0.18
ATM-212ENST00000527805 TNNC1P63316 161 aa16.17■□□□□ 0.18
ATM-212ENST00000527805 RPF1Q9H9Y2 349 aaKnown RBP16.17■□□□□ 0.18
ATM-212ENST00000527805 RGPD2P0DJD1 1756 aa16.17■□□□□ 0.18
ATM-212ENST00000527805 TAL1P17542 331 aaPredicted RBP16.17■□□□□ 0.18
ATM-212ENST00000527805 PEX26Q7Z412 305 aa16.17■□□□□ 0.18
ATM-212ENST00000527805 UBL4BQ8N7F7 174 aa16.17■□□□□ 0.18
ATM-212ENST00000527805 BCCIPQ9P287 314 aaKnown RBP eCLIP16.17■□□□□ 0.18
ATM-212ENST00000527805 H2AFZP0C0S5 128 aa16.17■□□□□ 0.18
ATM-212ENST00000527805 ST3GAL1Q11201 340 aa16.17■□□□□ 0.18
ATM-212ENST00000527805 H2AFVQ71UI9 128 aa16.17■□□□□ 0.18
ATM-212ENST00000527805 HPS3Q969F9 1004 aa16.17■□□□□ 0.18
ATM-212ENST00000527805 PCDHB4Q9Y5E5 795 aa16.17■□□□□ 0.18
ATM-212ENST00000527805 LRP6O75581 1613 aa16.17■□□□□ 0.18
ATM-212ENST00000527805 NPHP3-ACAD11A0A0J9YXS1 232 aa16.16■□□□□ 0.18
ATM-212ENST00000527805 RHOXF2BP0C7M4 288 aa16.16■□□□□ 0.18
ATM-212ENST00000527805 NUDT12Q9BQG2 462 aa16.16■□□□□ 0.18
ATM-212ENST00000527805 RHOXF2Q9BQY4 288 aa16.16■□□□□ 0.18
ATM-212ENST00000527805 MSH4O15457 936 aa16.16■□□□□ 0.18
ATM-212ENST00000527805 PTPRAP18433 802 aa16.16■□□□□ 0.18
ATM-212ENST00000527805 MED10Q9BTT4 135 aa16.16■□□□□ 0.18
ATM-212ENST00000527805 BPIFB4P59827 614 aa16.16■□□□□ 0.18
ATM-212ENST00000527805 HAUS6Q7Z4H7 955 aa16.16■□□□□ 0.18
ATM-212ENST00000527805 LDHAP00338 332 aaKnown RBP16.16■□□□□ 0.18
ATM-212ENST00000527805 PGK2P07205 417 aa16.16■□□□□ 0.18
ATM-212ENST00000527805 C6orf222P0C671 652 aaPredicted RBP16.16■□□□□ 0.18
ATM-212ENST00000527805 GCLCP48506 637 aaPredicted RBP16.16■□□□□ 0.18
ATM-212ENST00000527805 NAALADL2Q58DX5 795 aa16.16■□□□□ 0.18
ATM-212ENST00000527805 INTS8Q75QN2 995 aaKnown RBP16.16■□□□□ 0.18
ATM-212ENST00000527805 CEP104O60308 925 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 FERP16591 822 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 DSG3P32926 999 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 FXR2P51116 673 aaKnown RBP eCLIP16.15■□□□□ 0.186e-6■□□□□ 10
ATM-212ENST00000527805 TERF1P54274 439 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 HERVK_113P62684 666 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 UBE2TQ9NPD8 197 aaPredicted RBP16.15■□□□□ 0.18
ATM-212ENST00000527805 TYW1Q9NV66 732 aaKnown RBP16.15■□□□□ 0.18
ATM-212ENST00000527805 PPP2R2CQ9Y2T4 447 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 ALS2Q96Q42 1657 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 CYTH3O43739 400 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 GH1P01241 217 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 RPA1P27694 616 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 CDC25BP30305 580 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 TOB1P50616 345 aaPredicted RBP16.15■□□□□ 0.18
ATM-212ENST00000527805 VGLL4Q14135 290 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 RPS6KA1Q15418 735 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 MAATS1Q7Z4T9 603 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 VSTM4Q8IW00 320 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 DGAT1O75907 488 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 NMT1P30419 496 aaKnown RBP16.15■□□□□ 0.18
ATM-212ENST00000527805 SREBF1P36956 1147 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 RNASELQ05823 741 aaKnown RBP16.15■□□□□ 0.18
ATM-212ENST00000527805 PTPAQ15257 358 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 SLC51AQ86UW1 340 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 LRFN2Q9ULH4 789 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 RGPD5Q99666 1765 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 NPM3O75607 178 aaKnown RBP16.15■□□□□ 0.18
ATM-212ENST00000527805 KCNB1Q14721 858 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 SYCE1Q8N0S2 351 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 CCDC114Q96M63 670 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 NAP1L3Q99457 506 aaPredicted RBP16.15■□□□□ 0.18
ATM-212ENST00000527805 NACA2Q9H009 215 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 SMARCAD1Q9H4L7 1026 aa16.15■□□□□ 0.18
ATM-212ENST00000527805 LRRC37A3O60309 1634 aa16.14■□□□□ 0.17
ATM-212ENST00000527805 SURF1Q15526 300 aa16.14■□□□□ 0.17
ATM-212ENST00000527805 ZNF568Q3ZCX4 644 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms