RNA–Protein interactions for RNA: ENST00000526506.5

HIF3A-210, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-210ENST00000526506 BBXQ8WY36 941 aaPredicted RBP16.97■□□□□ 0.31
HIF3A-210ENST00000526506 HERVK_113Q902F9 699 aa16.97■□□□□ 0.31
HIF3A-210ENST00000526506 VWCEQ96DN2 955 aa16.97■□□□□ 0.31
HIF3A-210ENST00000526506 FAM167AQ96KS9 214 aa16.97■□□□□ 0.31
HIF3A-210ENST00000526506 FTOQ9C0B1 505 aaKnown RBP eCLIP16.97■□□□□ 0.31
HIF3A-210ENST00000526506 COL1A2P08123 1366 aa16.97■□□□□ 0.31
HIF3A-210ENST00000526506 KIF28PB7ZC32 967 aa16.96■□□□□ 0.31
HIF3A-210ENST00000526506 WNT7AO00755 349 aa16.96■□□□□ 0.31
HIF3A-210ENST00000526506 RPLP2P05387 115 aaKnown RBP16.96■□□□□ 0.31
HIF3A-210ENST00000526506 ACTN1P12814 892 aa16.96■□□□□ 0.31
HIF3A-210ENST00000526506 ATP2B1P20020 1258 aa16.96■□□□□ 0.31
HIF3A-210ENST00000526506 ATP4AP20648 1035 aa16.96■□□□□ 0.31
HIF3A-210ENST00000526506 ZNF484Q5JVG2 852 aa16.96■□□□□ 0.31
HIF3A-210ENST00000526506 RASIP1Q5U651 963 aa16.96■□□□□ 0.31
HIF3A-210ENST00000526506 RUFY4Q6ZNE9 571 aa16.96■□□□□ 0.31
HIF3A-210ENST00000526506 OTOP2Q7RTS6 562 aa16.96■□□□□ 0.31
HIF3A-210ENST00000526506 TRMT1LQ7Z2T5 733 aaKnown RBP16.96■□□□□ 0.31
HIF3A-210ENST00000526506 RPAINQ86UA6 219 aa16.96■□□□□ 0.31
HIF3A-210ENST00000526506 RSPH3Q86UC2 560 aa16.96■□□□□ 0.31
HIF3A-210ENST00000526506 NOL7Q9UMY1 257 aaKnown RBP16.96■□□□□ 0.31
HIF3A-210ENST00000526506 TRIP12Q14669 1992 aaPredicted RBP16.96■□□□□ 0.31
HIF3A-210ENST00000526506 H3BQV1 296 aa16.95■□□□□ 0.3
HIF3A-210ENST00000526506 ZNF862O60290 1169 aa16.95■□□□□ 0.3
HIF3A-210ENST00000526506 NBNO60934 754 aa16.95■□□□□ 0.3
HIF3A-210ENST00000526506 CXCL10P02778 98 aa16.95■□□□□ 0.3
HIF3A-210ENST00000526506 OATP04181 439 aa16.95■□□□□ 0.3
HIF3A-210ENST00000526506 CTSHP09668 335 aa16.95■□□□□ 0.3
HIF3A-210ENST00000526506 MCM7P33993 719 aa16.95■□□□□ 0.3
HIF3A-210ENST00000526506 TRAPPC10P48553 1259 aa16.95■□□□□ 0.3
HIF3A-210ENST00000526506 PRKCEQ02156 737 aa16.95■□□□□ 0.3
HIF3A-210ENST00000526506 ORC2Q13416 577 aaPredicted RBP16.95■□□□□ 0.3
HIF3A-210ENST00000526506 MBTPS1Q14703 1052 aa16.95■□□□□ 0.3
HIF3A-210ENST00000526506 UGCGQ16739 394 aa16.95■□□□□ 0.3
HIF3A-210ENST00000526506 MTHFD1LQ6UB35 978 aa16.95■□□□□ 0.3
HIF3A-210ENST00000526506 LRCH3Q96II8 777 aa16.95■□□□□ 0.3
HIF3A-210ENST00000526506 NRBP2Q9NSY0 501 aa16.95■□□□□ 0.3
HIF3A-210ENST00000526506 CEP131Q9UPN4 1083 aa16.95■□□□□ 0.3
HIF3A-210ENST00000526506 PCDHA2Q9Y5H9 948 aa16.95■□□□□ 0.3
HIF3A-210ENST00000526506 ZBTB42B2RXF5 422 aa16.94■□□□□ 0.3
HIF3A-210ENST00000526506 K7ELQ4 463 aaPredicted RBP16.94■□□□□ 0.3
HIF3A-210ENST00000526506 EML1O00423 815 aa16.94■□□□□ 0.3
HIF3A-210ENST00000526506 GPNMBQ14956 572 aa16.94■□□□□ 0.3
HIF3A-210ENST00000526506 FAM26DQ5JW98 314 aa16.94■□□□□ 0.3
HIF3A-210ENST00000526506 TTC38Q5R3I4 469 aa16.94■□□□□ 0.3
HIF3A-210ENST00000526506 LARP1BQ659C4 914 aaKnown RBP16.94■□□□□ 0.3
HIF3A-210ENST00000526506 MCTP1Q6DN14 999 aa16.94■□□□□ 0.3
HIF3A-210ENST00000526506 DNAJB3Q8WWF6 145 aa16.94■□□□□ 0.3
HIF3A-210ENST00000526506 ZBTB10Q96DT7 871 aa16.94■□□□□ 0.3
HIF3A-210ENST00000526506 FAM49AQ9H0Q0 323 aaPredicted RBP16.94■□□□□ 0.3
HIF3A-210ENST00000526506 CXXC1Q9P0U4 656 aaPredicted RBP16.94■□□□□ 0.3
HIF3A-210ENST00000526506 PCDHA12Q9UN75 941 aa16.94■□□□□ 0.3
HIF3A-210ENST00000526506 SCN5AQ14524 2016 aa16.94■□□□□ 0.3
HIF3A-210ENST00000526506 KAT6AQ92794 2004 aa16.94■□□□□ 0.3
HIF3A-210ENST00000526506 SMIM35A0A1B0GVV1 85 aa16.93■□□□□ 0.3
HIF3A-210ENST00000526506 ZBBXA8MT70 800 aa16.93■□□□□ 0.3
HIF3A-210ENST00000526506 KLRC1P26715 233 aa16.93■□□□□ 0.3
HIF3A-210ENST00000526506 PSMC5P62195 406 aa16.93■□□□□ 0.3
HIF3A-210ENST00000526506 SMAD3P84022 425 aaKnown RBP16.93■□□□□ 0.3
HIF3A-210ENST00000526506 SPIRE1Q08AE8 756 aa16.93■□□□□ 0.3
HIF3A-210ENST00000526506 NCAPH2Q6IBW4 605 aa16.93■□□□□ 0.3
HIF3A-210ENST00000526506 BANK1Q8NDB2 785 aa16.93■□□□□ 0.3
HIF3A-210ENST00000526506 MTMR9Q96QG7 549 aa16.93■□□□□ 0.3
HIF3A-210ENST00000526506 TTC12Q9H892 705 aaPredicted RBP16.93■□□□□ 0.3
HIF3A-210ENST00000526506 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.92■□□□□ 0.3
HIF3A-210ENST00000526506 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.92■□□□□ 0.3
HIF3A-210ENST00000526506 DKC1O60832 514 aaKnown RBP eCLIP16.92■□□□□ 0.3
HIF3A-210ENST00000526506 BAIAP3O94812 1187 aa16.92■□□□□ 0.3
HIF3A-210ENST00000526506 C22orf31O95567 290 aa16.92■□□□□ 0.3
HIF3A-210ENST00000526506 P4HBP07237 508 aaKnown RBP16.92■□□□□ 0.3
HIF3A-210ENST00000526506 TXKP42681 527 aa16.92■□□□□ 0.3
HIF3A-210ENST00000526506 QARSP47897 775 aaKnown RBP16.92■□□□□ 0.3
HIF3A-210ENST00000526506 MRPS6P82932 125 aaKnown RBP16.92■□□□□ 0.3
HIF3A-210ENST00000526506 EPHA7Q15375 998 aa16.92■□□□□ 0.3
HIF3A-210ENST00000526506 ZNF174Q15697 407 aa16.92■□□□□ 0.3
HIF3A-210ENST00000526506 XKR3Q5GH77 459 aa16.92■□□□□ 0.3
HIF3A-210ENST00000526506 GPR153Q6NV75 609 aa16.92■□□□□ 0.3
HIF3A-210ENST00000526506 CNKSR3Q6P9H4 555 aa16.92■□□□□ 0.3
HIF3A-210ENST00000526506 SNX21Q969T3 373 aa16.92■□□□□ 0.3
HIF3A-210ENST00000526506 INTS4Q96HW7 963 aaKnown RBP16.92■□□□□ 0.3
HIF3A-210ENST00000526506 TMEM60Q9H2L4 133 aa16.92■□□□□ 0.3
HIF3A-210ENST00000526506 SLC4A7Q9Y6M7 1214 aa16.92■□□□□ 0.3
HIF3A-210ENST00000526506 MYH9P35579 1960 aaKnown RBP16.91■□□□□ 0.3
HIF3A-210ENST00000526506 M0QZ92 97 aa16.91■□□□□ 0.3
HIF3A-210ENST00000526506 MAGEB2O15479 319 aa16.91■□□□□ 0.3
HIF3A-210ENST00000526506 CHRNA1P02708 482 aa16.91■□□□□ 0.3
HIF3A-210ENST00000526506 OR52Z1P0C646 297 aa16.91■□□□□ 0.3
HIF3A-210ENST00000526506 PDCP20941 246 aa16.91■□□□□ 0.3
HIF3A-210ENST00000526506 IER5Q5VY09 327 aa16.91■□□□□ 0.3
HIF3A-210ENST00000526506 NME8Q8N427 588 aa16.91■□□□□ 0.3
HIF3A-210ENST00000526506 NIFKQ9BYG3 293 aaKnown RBP16.91■□□□□ 0.3
HIF3A-210ENST00000526506 SEPT9Q9UHD8 586 aaPredicted RBP16.91■□□□□ 0.3
HIF3A-210ENST00000526506 STBD1O95210 358 aa16.9■□□□□ 0.3
HIF3A-210ENST00000526506 TOB1P50616 345 aaPredicted RBP16.9■□□□□ 0.3
HIF3A-210ENST00000526506 MGAT3Q09327 533 aa16.9■□□□□ 0.3
HIF3A-210ENST00000526506 NBR1Q14596 966 aa16.9■□□□□ 0.3
HIF3A-210ENST00000526506 PLEKHG4Q58EX7 1191 aa16.9■□□□□ 0.3
HIF3A-210ENST00000526506 RILPL1Q5EBL4 403 aa16.9■□□□□ 0.3
HIF3A-210ENST00000526506 FAM109BQ6ICB4 259 aaPredicted RBP16.9■□□□□ 0.3
HIF3A-210ENST00000526506 HSCBQ8IWL3 235 aa16.9■□□□□ 0.3
HIF3A-210ENST00000526506 KIAA0319LQ8IZA0 1049 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms